Mercenaria mercenaria (northern quahog): 123557946
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Entry
123557946 CDS
T07835
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123557946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123557946
03036 Chromosome and associated proteins [BR:
mmer03036
]
123557946
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123557946
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
123557946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
LIM
Motif
Other DBs
NCBI-GeneID:
123557946
NCBI-ProteinID:
XP_053400747
LinkDB
All DBs
Position
5:92575351..92628935
Genome browser
AA seq
1847 aa
AA seq
DB search
MFGGSKPTGFGTPFAANASATPGFGGTAFGQATPTAGGGLFGQSTTGTGTGTGLFGGSGG
SAFGTQSSGFNFGATPSSTGGLFGPKTTASTGLFGTPAAASTSNAFGFGSAAGGFGATTT
TSSTAGGLFGTTNNAGTGLFGASPAFSQQPQAGTAIKFNPPQGQDTMVKNGVTQNINTKH
QCITAMKEYEGKSLEELRVEDYTAGRKGKQAGTTSGFGFGTPAASATQPTGFAFAQAKPS
GFGASTGFGTNTSTGTSNLFGQPTAQASTGGGLFGQNKPLFGNTTTTTQSGFGFGTQTST
GTGGLFGQATQNKPLFGATTTTQPSLFGTGANTFGQTAASSGFGGFGTSQAGGLFATKPA
FGAQTTSTGGFGGFGTNSNTGANLFAKPFSTPSTGFGFNTATTSSGFGGTQPFGAAKPTG
FSLATTSAAPAFNFTGGMSAGTSMFGNPLNKPGGLGAFGSAAPTGFGTFSSATSGLGSTV
PTLGGTANQSAVNQAVQLQQTLQALTNSPYGDSPLFWNMKESKTKREDVLKPTNPVAQKA
ILANQHKVSPRPMAKIRPKALSGALNGNKSQIFEGLEEDDFSFGSDTFQPRKSVKKLTIK
KVGQDSSNPSRASSMSGEPPNMSSLREEENFRGRSSPVAYNEQRRQEADVPETENIIRSK
GISDQMDTPDRRPNMDDTIAMLNAQNKSSSAREPVSSSTREPVNSGPSQDDTVNISIISR
DESVNDDVIIDERPMTPPPPHPAGIVLSRPGYYTIPSQEALSEMVDEDGNCFVEDFTIGR
EGYGSIFFPGMTNIANMNFDETVFFRRKEVIVYPDDDNKPEVGEGLNKRAEITLDCVWPR
DKSIGTPIKSPEKLKAMRWQDKIEENSLKVGAKFIDYRPETGSWVFEVKHFSKYGLVDDS
DEEDMPEQDKKRLRLAQQQQMAVQKQKLNLEHLEKQKQQGALKVGATNGHAKPGGHLAKF
TVGTDEESDGSGTARTEVPMGDDDNQISEASQGGTSELAGELDDEDMDVPDEQPSSHRLA
TSMGVDARNMQVMKASFFGDEDAPAPAFDGSMFAKKQGPPTGSPLLRHGDGPSLFSSSLK
SKYMSPVKIANIPQKETTKDRGLFSPRLITPEPIRATKSPQTYHPPVKEYMLLESGMTQQ
DYQQRVVGSRVQKVIPMVTESFTYNKQALLVDAGLFMGRSFRVGWGPGWTLAHCGDIVQP
EDLEEDKPTNTFSLFTGGQKRSTKQAETSWIVHLQKINIADHIQSADKTVIQNHREMLEI
QLVHSRSTKEGNCPVFTPSLGVEALHQYAERNQDELETLGSHPDESSVKHMGMVWDLCVA
LWGNMPEFKDMEIERDTYLYHNARREAFSRWLSSVSGEIIRKEVQESKYKDQGHLEAILS
CLTGHQVTEACNLAQKAGDHRLALILAQSVSNYIPRQMVSKQLDELIELGVDNFFKETRL
KIYSLLAGQLVLPCNNMTVNTCDGMDWKRSLALHLWFCCQAEAPIQEAVELYERAFKGTN
ENQQYSRPPLPPYLEAEVMEEVEVSVRDTCYHILCLYCQKCHQLERLLNPTTSTSSHLDY
RLSWHLSQVLQSLSYNHLSAYHRASLHMNFAAHLESLDLWEWAVFVALHIENPISRESAV
RSILNRHIQLSSSESYLEKEELLNERLLVPVEWIHSAKALRANYESKHKEEAWHLLKAGQ
WNKSHDVIMRHIAPDAIIHERYEYLHEFLAELSIPVRSATILDWHIAGSVYLEYINISNS
MKQLSKAGEPSLYELDRLLPEVKSLCTKVGSIPCRNSKDRLCQSEMAKKAANFLRLILTF
QAEANGEPQPPMRLLAPYISNLPMPEDYTLHELRALTRSYMMEQTVS
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaggctcaaaaccaacaggatttggaaccccttttgcggcaaatgcaagtgct
acaccaggatttggaggtacagcatttggacaggcaacacctacagcaggaggagggctg
tttggacagagtactacagggaccggcacagggactggtctctttggtggaagtggagga
tcagcatttgggacgcagtcatcaggatttaattttggtgcaacccctagcagtacaggc
ggactgtttggaccaaagactacagccagcactggcctgtttggcacaccagctgcagct
agcaccagtaatgcatttggatttggaagtgcagcaggtggatttggagctacaacaaca
acaagcagcactgcaggtggtctgtttggaacaacaaataatgcaggaactgggctcttt
ggagcaagtccagcattttcacagcagccccaggctggcacagccataaaatttaatcca
ccccagggtcaggacacgatggtaaagaatggtgtaacacagaatatcaatacaaaacat
cagtgtatcactgcaatgaaagaatacgaggggaaaagtctggaggagctaagagtggaa
gactatactgcaggaaggaagggaaaacaagcaggaacaacttcagggttcggatttgga
acccctgcggcatcagccacacaacctacaggctttgcttttgcacaggccaagccatca
gggtttggagcatcaactggatttggaacaaacacctcaacaggaaccagtaatctgttt
ggtcagccaactgcccaggcatcaactggtgggggactgtttggtcagaacaagcccttg
tttggcaacacaaccactactacacagagtgggtttggatttggaacccagacaagcaca
ggaactggtggtctttttggtcaagcaacacagaataagccactgtttggagccacaaca
actacacagccgagcctgtttggaacaggagcaaacacatttgggcaaactgctgccagc
tctggttttggtggttttggaacatcgcaagctggtggattgtttgcaaccaaacctgca
tttggagcccagacaacctccactggcgggttcggaggatttggtaccaactctaacact
ggggccaacctttttgccaaaccattctctacacctagtactggttttgggttcaacact
gcaaccacttcatctggatttggtggaacacagccctttggtgcagcaaaaccaactggc
tttagtctggcaacaacctcagcagctccagcattcaactttacagggggaatgagtgca
ggaaccagtatgttcgggaatccactgaataaacctggaggactaggtgcctttggctca
gctgcccctacaggttttgggacattcagtagtgcaacttctggtcttggtagtacagtt
cccacactaggagggacagcaaatcaatctgcagttaatcaggcagttcagctacaacag
acactgcaagcacttaccaattctccttacggtgattctccacttttctggaacatgaaa
gagagtaagaccaaacgggaagatgttctaaaacccaccaacccagtggcacagaaagcc
attctggctaatcaacataaagtgagtccgagacctatggcaaagatcagacccaaggct
ttgtctggagcactgaatggtaacaagtctcagatatttgaaggcttggaagaagatgat
ttcagttttggaagcgacacattccagccaaggaagagtgttaagaaactgacaatcaaa
aaggtgggacaagattcaagtaaccccagcagagcctcgtctatgagtggtgaaccacca
aacatgtcttctttaagggaggaagagaatttcaggggaaggtcctctcctgttgcatac
aatgaacagaggagacaggaggcagatgttccagaaactgagaatatcatcagaagtaaa
ggcatctctgatcagatggatacaccagatagaaggccgaacatggatgacacaattgct
atgttgaatgcccagaataaatcttctagtgctagggaaccagttagttccagtacaaga
gaaccagttaattccggaccatcacaggatgacacagtcaatatcagtatcatttccaga
gatgagtctgttaacgatgatgtcattatagatgagagaccaatgacaccaccaccccca
cacccagcaggtatcgtgctgtcgagacccgggtattacacaataccaagtcaggaggca
ctctcggagatggtggatgaagatggtaactgctttgttgaggactttacaatcggcagg
gaaggatatggaagcatattctttccaggaatgacaaatattgccaatatgaactttgat
gagactgtgtttttccgtcgcaaagaggtaatcgtgtatccagacgatgacaacaaacct
gaagtgggtgaaggtctcaataagagggcggagattactttggactgtgtttggccgagg
gataaatctataggaactcccattaagagccctgagaagttgaaggcaatgagatggcag
gacaagatagaggagaattctcttaaagttggtgccaagtttattgactacaggcctgag
acaggatcttgggtgtttgaggtgaaacatttctcgaagtatggtctggttgatgactcg
gatgaggaggatatgccggaacaggacaagaaacgtttacgtctggcacagcagcaacag
atggctgtacagaaacaaaaactgaatctggagcatttggagaagcagaaacagcaaggt
gctctgaaagtgggggctacaaatggacatgcaaaacctggcggccatcttgccaagttc
actgttggtacagacgaggagagtgatggaagcggtactgcgagaactgaggttcccatg
ggggatgatgataatcagatatcagaggcctctcaaggggggacaagtgaattagcagga
gaactagatgatgaagatatggatgtcccagatgaacaaccatcttcacatcgcttagca
acaagtatgggagttgatgcaagaaatatgcaggtcatgaaagcttctttctttggtgac
gaggatgccccagctccagcatttgatggttcaatgtttgccaagaaacaagggccgccg
actggatcaccattactgaggcacggagatgggcccagtctgttcagttctagtctgaaa
tctaaatacatgtcaccagtcaaaattgctaatataccacagaaagagacaacaaaagac
agaggcctattttcaccacgtctgatcacaccagagccaatcagagctacaaaatcacct
cagacctaccatccgccagtgaaggaatatatgttgctagaaagtggcatgacacaacaa
gactaccagcaaagggtcgttgggtcaagggtacaaaaggtcatccccatggtaactgag
agttttacatacaacaagcaggcattattggtagatgcaggattgtttatgggaaggtca
ttccgtgtgggctggggaccaggttggactctggctcattgtggagatattgtacaacct
gaagatctagaggaggacaagcctacaaacacattcagtttgttcactggaggtcagaaa
cgcagtacaaaacaggcggagactagctggattgtacatctacagaaaatcaacattgcc
gaccatatacagtctgcagataaaactgtcattcaaaatcatcgtgagatgttagagatc
cagttggtgcattcgagaagcacaaaggaagggaactgtcctgtatttacaccatcattg
ggtgtggaggcactgcatcagtatgcagagagaaatcaggatgaactcgagacgttaggt
tctcacccagatgaatcaagcgtcaaacatatgggtatggtatgggatctgtgtgttgct
ctgtggggaaatatgccagagtttaaagatatggaaatagaaagagacacctacctgtac
cacaatgcaaggagagaggcattttcaagatggctgtcatctgtgtcaggggagataatc
agaaaagaagtccaagaaagcaagtacaaggaccagggtcatttagaagccattctgagt
tgcttaactggacatcaggtgactgaagcttgcaacttggcacagaaggctggtgaccac
aggctagcacttatactagcccagtctgttagcaattatatacccagacagatggtctca
aaacaactagatgagctcattgaacttggtgttgacaatttcttcaaagagacaagacta
aaaatctacagtttacttgctggtcaacttgtgctaccctgtaacaacatgacagtaaat
acttgtgatggaatggactggaagagaagtttagctttacatttatggttctgttgtcaa
gctgaagcacctatacaggaagctgttgagttgtatgagagagcattcaaagggaccaat
gagaatcaacaatattcacgtcctccattgccgccctacctcgaggctgaagtgatggag
gaagtggaggtttctgtacgagacacatgttatcatattctttgtctgtactgtcaaaaa
tgtcaccagttagaacgtctgttgaatcctacaacatcaacatcaagtcatctagattat
agactcagctggcatttaagccaagtgttacagagtctctcatacaatcacctatcagca
taccacagagcaagcctccacatgaactttgctgcacatctagagtctctcgatctctgg
gaatgggccgtctttgttgcattgcatatcgaaaacccaatcagccgtgagtcagcggta
cgaagtatactcaatcgtcacattcagctatcatcatcagagtcatacctagaaaaggaa
gagttattgaatgaaaggctgttggtacctgttgaatggatacatagtgctaaagcttta
agagcaaattacgaatcaaagcataaagaagaagcgtggcacttgctgaaggccggacaa
tggaataaaagtcacgatgttataatgaggcatatagcacctgatgctattatacatgaa
cgttatgaataccttcacgagtttctggcagagttatctatcccagtacgtagtgctacc
atactggactggcatattgctggcagtgtatacctagaatacatcaacatctctaacagt
atgaaacaactgtcaaaggctggagaaccaagcttgtatgaattagacagacttttacca
gaagtaaaatcgttgtgtacaaaagttggaagtattccatgtagaaactcaaaggacaga
ctgtgtcagtcagaaatggcaaagaaagcagcaaatttccttagactgattctcacattt
caagctgaggccaatggagaaccacagcctccaatgaggttattagcaccatacataagt
aacttaccaatgccagaggactacaccttgcatgagttacgtgcccttactcgaagttac
atgatggaacagactgtatcatga
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