Mercenaria mercenaria (northern quahog): 123557958
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Entry
123557958 CDS
T07835
Name
(RefSeq) glycine receptor subunit alpha-2-like
KO
K05194
glycine receptor alpha-2
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
123557958
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmer04040
]
123557958
Ion channels [BR:
mmer04040
]
Ligand-gated channels
Glycine
123557958
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Connexin
Cas_Csm6_CARF
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
123557958
NCBI-ProteinID:
XP_053400317
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Position
5:92762636..92777330
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AA seq
424 aa
AA seq
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MNKFITVIVIGLNLVFHSQFATAGFTSFQELETTLLQATLNEYASRPQSSDPDGAVNVGV
RVVFTDVQPIQRESIDVIVHIQSEWDDVRLQYNVTSGTPARINETLIYALHEKIWKPDFY
LEPEWTLNNDVGKMNIRIIANGQVGKNKRFRATIPCTTSFVGIEHTDFICTTRVMSYSYF
DNEVKLYWVADEPLRLKYGAIDAASEITRGENDTCHWDTFDGMRTSCIEVKLFITKRFPS
IFYRLYLPSFMAVLMAWSSFWIHRDEASARIKLGTLVVWTVMTEYISLEVAFPNYLDNIA
GNVWMLGCMFFTWASFILYVIIHVVRRREKAKARHDEEREKEKEKEEKRTGERALSISAL
HPDARLASGGLKGYSVWDNRNKFKVTKIYISSFTLERWCRIWFGILFFGFTIFFLAFFGQ
DLFA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatttataacagtaattgttataggattgaatcttgtttttcatagtcagttt
gcaacagctgggtttacaagttttcaagaactggaaacaactttgttacaggctacattg
aatgaatatgccagcagacctcaatcttccgaccccgacggtgctgtgaatgtaggtgtt
cgggtggtatttaccgacgtacagccaatacaacgagagagtatcgacgtcattgttcat
attcaatcagaatgggatgacgtacgtctgcaatacaacgttacgtcgggaacaccggca
agaataaacgaaacgttgatatacgctcttcatgagaaaatctggaagccagacttttat
cttgaacccgaatggacattaaataacgatgttgggaaaatgaatataagaattatagct
aatggacaagtcggcaagaataaaaggttcagagccacgattccttgcacgaccagcttt
gttggtattgaacatacagatttcatctgcacaacaagagttatgtcctattcctacttt
gataatgaggtgaagttgtactgggttgctgatgagccactgcgattgaagtatggagca
atagacgcggcatcagaaataactagaggagaaaatgatacttgtcactgggatacattt
gatggaatgagaacgtcatgcattgaagtaaagctgtttatcaccaaacgatttccgtcc
atcttctatcgtttatacttaccaagtttcatggcagtactcatggcatggtccagcttc
tggatccaccgtgatgaagcttcagcaagaatcaaacttggaacgcttgttgtgtggacc
gtaatgacagagtacatttctctcgaagttgcctttccgaattacctggataacattgct
ggaaatgtatggatgttaggatgcatgtttttcacgtgggcttcgtttatactctacgtc
attattcacgtggtacggagacgagaaaaggctaaagcgagacacgatgaagaaagggaa
aaggaaaaagagaaagaagaaaaaagaacaggggagagagctctttcaatatccgccctc
catccggatgcgcggcttgcaagtggagggttgaaaggatattctgtatgggataaccgg
aataagttcaaagtaacgaagatatacatttcttcgttcacattagaacgctggtgtaga
atctggtttggaattctcttcttcggatttactattttcttcctcgcattctttggacag
gatttgtttgcgtga
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