KEGG   Mercenaria mercenaria (northern quahog): 123558064
Entry
123558064         CDS       T07835                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1-like
  KO
K12171  E3 ubiquitin-protein ligase SH3RF [EC:2.3.2.27]
Organism
mmer  Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:mmer00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mmer01009]
    123558064
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mmer04121]
    123558064
Enzymes [BR:mmer01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     123558064
Protein phosphatases and associated proteins [BR:mmer01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     123558064
Ubiquitin system [BR:mmer04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    123558064
SSDB
Motif
Pfam: SH3_1 SH3_9 SH3_2 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 zf-RING_11 zf-RING_4 zf-RING_6 zf-RING_10 zf-rbx1 Prok-RING_4
Other DBs
NCBI-GeneID: 123558064
NCBI-ProteinID: XP_053398496
EnsemblRapid: LOC123558064
LinkDB
Position
5:complement(3794796..3824760)
AA seq 790 aa
MDEQALNELLECSVCLDQLDDTSKVLPCQHTFCKRCLEEIVSTKHELRCPECRFHVEMRV
EDLPSNILLIRLLEGLKSQSRIASSQGPGHRRETLGSPGSSKADNTNQAVAAFARQQQQR
QASTSNRPCAKALFNYDAKDPGDLSFKKGDIVYLKKQVDENWFHGELNGQHGFFPVNYVQ
VITALQDTIPQCKGLYDFTVDDDKEEDCMPFKKDDTMTVIRRVDENWLEVKKGDKIGILP
ISFVELNDPAKRLLSLTDKNAIAIAGSDPPVTPAHPVRSAKEGSPGAVPVVNKRHSLTTI
PLTVTTPASALQRRSLDSNTDTDLLATGGQSVAIAAPLLSTMTTEMPVTMTTQPKIPANQ
AISVPPRKTETELPLVPSQNKPDSTVILDQPAVTSRHTGDVMSASLTAGRKEDVASGSIG
SSASIYIALYNYKPQKGDELELIKGDYYSVSEKCLDGWYKGVALKTNLSGVFPGNYVQSV
KTHTSTSKSSSKSLVTKPKLPPPDQGLNAATKPSLSPPRPKTSSSEAAGRSRARPDRERR
SASGDRNGAPPPIVPRSGQNLAPSSGKGHVSPSPNSPILLTSKTTRYVRAPKSSSPSLGA
KSDTSPNTSASSPVWKHSMSASANITPPNVVVGASANHAPAVVKEKEKKKDKEKLSLMKR
ITSAGKLKKPKSTDVESASLSDSSVSHSRSGSYPSDTSPLVPLEPNHKKSGSFDSSSPNT
QRRPTRPKPLAREKYRCIDTYPAQSEIELDLKIGDVIYVHKKRDDGWFKGTLQRSGKTGL
FPGTFVVKVS
NT seq 2373 nt   +upstreamnt  +downstreamnt
atggacgaacaagcactgaatgagttgctggaatgttcagtatgtttggatcagctagat
gatacaagcaaagtgttgccatgccaacatacattctgtaaacggtgtttggaggaaatt
gtcagtacaaaacatgagctacgctgcccagaatgtcgcttccatgttgagatgcgagtg
gaagaccttccttccaatattctgcttatccgtctcctggaggggttgaagtctcagtct
cggattgcaagttcacaaggaccaggacatagaagagagactctaggttcaccagggtct
agcaaggcagataatacaaaccaggcagtagcagcatttgctagacaacagcaacagaga
caggcaagtaccagcaatcgaccatgtgccaaagctctcttcaattatgatgctaaagac
ccaggggatctctcatttaagaagggagatattgtgtatctgaagaaacaggtagatgag
aactggttccatggagagctgaatgggcaacatggtttctttccggtcaattatgtacag
gttattacagcattacaagatactatacctcagtgtaagggtctgtatgactttacagta
gatgatgacaaggaagaagattgtatgccattcaaaaaggatgatacaatgactgtgatc
agaagggtagatgagaactggttggaggtgaagaaaggagataagattggtattctaccc
atatcatttgtagagctgaatgaccctgccaaaagactactaagtttgacagataaaaat
gccatagcgatcgctggttctgatcctcctgtgaccccagcccatcccgtgagatcagcg
aaagaaggctccccaggcgctgtacctgtagtgaacaaacgccattctctaacaacaatc
ccccttacagtaactactcctgccagtgctttacaacggagatccttagacagtaatact
gacactgacctcttggcaactggaggtcagtctgttgccattgcggcaccattgctatct
actatgacaacagaaatgccagttactatgacaacacagccaaaaataccagccaatcag
gctatctcagtacctcctagaaaaactgagacagaactcccattggtgccttcccagaac
aaaccagatagcacagtaatattggaccagccagcagtaacatctcgacatacaggtgat
gtgatgtctgccagtttaactgctggtaggaaggaggatgtagcatctggcagtattgga
tcatcagcttccatatatatagcattgtacaactataaacctcagaagggagatgagtta
gaattgatcaagggagattattactctgtctcagagaagtgcctggacggctggtataaa
ggtgtggcactgaagaccaacttgtctggagtctttccagggaattacgttcagtctgtg
aagactcataccagtacatctaaatcatcgagcaagtctttggttacaaaaccaaaacta
ccaccaccagatcagggtttaaatgcagcaacaaaaccatcattaagccctcctagaccc
aaaactagcagttctgaggcagctggcaggtctcgtgcaagacctgatcgtgaaaggagg
tcagctagtggggacaggaatggtgcaccacctcctattgttccaagaagtggacagaat
ttagcaccatcctcaggcaaaggtcatgtttcacccagtcccaatagtccaatactcctg
acgtccaaaacaacacgctatgtccgagccccaaagtcatccagtccaagcctcggtgct
aaatcagatacaagtcctaacacgagtgccagcagcccagtgtggaaacattcaatgtca
gcaagtgccaacattacgccacctaatgttgttgttggagcctcggctaaccatgcacct
gctgttgtcaaagaaaaggagaagaagaaagataaggaaaagctgagcctgatgaagaga
ataacctcagctggtaaactgaagaaacctaagtctactgatgtagaatcagcctctctt
agtgactccagtgtttcacatagcagatctggatcgtatccctctgacacctcaccccta
gtacctttagagccaaaccacaagaagtcaggatcatttgattcatcctcacctaacact
caacgcaggcctaccaggcctaaacctcttgccagagaaaagtatagatgtatagacacg
tacccagcacagagcgaaattgagctggatctcaaaataggtgacgttatatatgtgcac
aagaagcgtgacgatggttggtttaagggtacgctgcaacgttcaggcaaaacaggactt
ttcccaggaacttttgtagtgaaggtgtcttga

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