Mercenaria mercenaria (northern quahog): 123558090
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Entry
123558090 CDS
T07835
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC123558090
KO
K24929
tetratricopeptide repeat protein 6
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mmer04990
]
123558090
Domain-containing proteins not elsewhere classified [BR:
mmer04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
123558090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_11
TPR_17
TPR_16
TPR_9
TPR_19
TPR_12
TPR_6
TPR_14
TPR_CcmH_CycH
ANAPC3
ARM_TT21_N
TPR_MalT
ARM_TT21_5th
ARM_TT21_C
SNAP
Motif
Other DBs
NCBI-GeneID:
123558090
NCBI-ProteinID:
XP_053400399
LinkDB
All DBs
Position
5:8589733..8721709
Genome browser
AA seq
2278 aa
AA seq
DB search
MGSKELQPSLRDERRTFRYGTNRMVEISLRHELDDMAKKSLDEIIVKKELEQLRPIDNEE
FTSRRLRPAFAPRRLRKKMKLQPVFHDELLKLKPKAPQFMLIPNIPPYNPLDKFGMPKEF
SDDKIRTYPYARENTITTEVMQKVKISSMGVLPVRKSTDISGLKVIMEGQPVTQCRDVEF
DEMQEANQIAEERAETPGTPDEMDIEPELTDRPETPKKKPAIIGSEGTSVKVSLAVRPPA
QPHPSTLKRKYRRGKGHWEESRCAASKTLKEPRSMASSLKSTEILLPGKEVYRKYDTAIE
DLDGDLENVQTAMGTQDQKEVQIPTAGEDGRKSGAMSEAAQSVVDMLEEARKIVSPGAEP
VHKMRKSPRKREVKKDAKKAKGEKGKGKKDEEGKEGGQRTERTVDEIIASLRSQSRTGQQ
SEADRKIAEIMERVMSRSSGATGEENLEERPDTAKDGKSGTTLTPLTRGSASAPQTRGSD
TGKSMSVSTPLTRGSEPSSYQPSPSPGAESVKSEKKDGELQEAIQEEDEEKQTDEQDKKD
AEKYLEERMQTTDPNIPPVPPSTAQRPPEVERLLGLGEPDSDEEKEEVIDIQKAWEDFQQ
PDVRHEDLVGVTGTAAVLEGRHPPLPGFKTPVAPVHSNTTSFLSAWKPVSEKRKHEGESE
AETRPSKSVHHFCTATTEYQLPEQFVNIGRKYHTPSRFEFAMPDQKFRFGSRGPSAMEER
PPLQSAQSGATDTGDSEQRRISAAARRVLQRVEEEGEGDNTMETWQQRAEEVFEAPQFTV
EGAGISTQYNESRLYWTPAPPKLDVAPAKVKDILFPEYQGIHAICLLLKDRGQTGHMCVT
LVLQIVQSYTDFCKVFYLGLRLCLTVHXLLXRPTVGAESQEMQDMMEESSSSEEEEEEME
ITEEDREQMEQLERIMLRRHKSMEDLTDLMIATRQRDEDIRDGKLFPYEDRIVIETEKDE
KPQVLEEHESSFAKVTGPVLDSDLFPTFVPWRRSSSAPDLNDEEDDTLMVSQDYNMAMEE
IQRQKRNIREWKIQQKLEQQQQQQMIEQPDFVEEEETIEQLQRVDPQEYRADILKIHSSP
KHDEPTPAEQALAAGRAYVILPKKKKKKVKSSITMARLDEIENFLKKPPRRLARCESMIR
IPKPIEKELRVPSRIREGTRRSMPDIFNFEEYGRRKGLKKDDDTREWVRDIWNNWFDEVF
PPTPEDSEYEEEEELTEEQIAEREEEEKKKKRNNSMSSSVPVGMEYIEPLTESDETLEVH
QIIMEEIEKLTGEMNKMKKPKAFDFSRRGALYRKIGYLKAAEDDLGRAIQLEPLLLDAYW
HRHLLYILQDRKKEALDDLTFLLKHTKSHAGAYRSMAEIYKKQDDITMAIVNYTQAIKLN
PRDHEAYFARAECYEKRGDMLLALEDYSSCTKIKPTRTDAILKHGMYYFENKSWGNAIND
FTDLLRVDPLNASARVLRGRAYAAMGQWSPSVEDLSAAIHLDPNHWEAFYHRACILRKAH
PKRALHDFSVSLLINDTDENIGSYLHRGILYNAMGKPEDAIPDFESVLKLNKDNACSHVN
LGLIMMNHYDNYHRAIKRFTSAIKVDPTYVRAYVCRGEAYHKIHELKLALRDFTRAIHLR
PDVHHYYMYRGQLLLELGHLDLAAFCVRHASEIGSEVSSMGQRPTQQAVVHSFLKNYDKA
IDALQTASRSNPTASMYMLLGKTQIKAKKFENAITSFQLALSVYEPKAKKSSTFVYGKEI
PILLQQKPWKARDPWPQEAADAHYLIGQCSMELRNYLDALNAFTDAIKLNSSMAEALYQR
GMARMKLKMSKGIQDFNRALAINPTIFQAYLSRACYYGTKGNYTKAILNCNEAIKLQPNS
VRAYLYRGALKYHIKAYELAIRDLSKAASIDSTCALAYFNRAVCYQENRDYQKALTDYGI
VLLLGDSLKLKVLINRGLLYFEKRDYTNALYDFKMSANMNPNDHKILHTLGLCYHKLGRL
QEAVKTFTMCVKSQPFFLDGIIARGNVYMDYGHEKGLRYAMRDYERVLRFDPMNLPARVN
LAYTLQVSGHFMQAWRQFTTAIDLKPNYKPALEGRSIINLQMSDTFASYQDINTAIKVNP
TAELLTNRGVIHQFMDDRVNAMRDYQAAIELDETYSLAYFNAGNVYFHSRQFSQALEYFT
KTVQYNPQDESAILNRAITRVMLKDSKGALEDFRAAIKLSPYSAHMYMNRGNLYASTQQF
EMAEKDFTKALELNPDDPLVLKRRADVRGKLGKKTEAVSDYRQAIELQGRIRYLKTGK
NT seq
6837 nt
NT seq
+upstream
nt +downstream
nt
atgggtagtaaagagttgcagccaagcctccgtgatgagaggagaactttccgctatgga
acaaaccgcatggttgagataagtttgcgacatgagctagatgatatggccaaaaaatca
ttggatgaaattatagtgaaaaaagaattagaacagctaagacctattgataatgaagaa
tttacatctaggagattgagaccagcatttgctccaagaagattaagaaagaagatgaaa
ttacagcctgtgttccatgatgaactgttaaaactaaaacctaaggcaccacagtttatg
ctgataccaaatattccaccatacaatccccttgataagtttggaatgccgaaagagttt
tcagatgacaagatccgaacctacccgtatgccagagaaaataccatcaccactgaagtg
atgcagaaggtgaagatctcttccatgggcgtgttgcctgttagaaagagtactgatata
tctggtttgaaagtgatcatggagggacagcctgtgacacagtgcagagatgttgaattt
gatgaaatgcaggaggcaaaccagattgcagaagagagagcagaaactcccggtacacca
gatgaaatggacattgagccagagcttactgacagaccagagacaccaaagaagaaacca
gcgatcataggttcagaggggacatcggttaaagtgtctctagctgtacgaccacctgcc
caacctcatccttcaacactgaagagaaagtataggcgaggtaaaggtcattgggaggaa
agcagatgtgccgccagtaagacactgaaggagccacggagtatggcctcctcattgaag
agtacagagattttattacctggtaaagaagtgtatcgtaaatatgatacagctatcgag
gatttagacggtgatctggagaatgttcagactgccatgggaacacaggaccagaaggaa
gttcaaataccgactgcgggcgaggatggcaggaagagcggtgctatgtcagaagctgca
cagtcagtggttgatatgttagaggaagcaaggaaaattgtctcccctggagcagaacca
gttcataagatgagaaaatctccacggaaacgagaggtgaagaaagatgcaaagaaagct
aaaggagagaagggcaaagggaagaaagatgaagaagggaaggaaggaggtcagcggaca
gagaggaccgtagatgaaattatagcatcattgcggagtcagtcaagaacgggacagcag
tctgaggctgatcgtaagattgcagagatcatggaaagggtcatgtcaaggtcaagtggg
gccaccggtgaggaaaatttagaggaaagaccagatacagcaaaggatggtaaatctggt
actaccttgaccccactcaccaggggcagtgcctctgcccctcagactaggggcagtgac
actggcaaatccatgtctgtctccacccctctaacccgaggcagtgagccatcctcatac
cagccttccccaagccctggggcagagtctgtcaagtcagaaaagaaagatggtgaactt
caggaagctatacaggaggaagatgaagagaaacaaacagatgaacaagataagaaagat
gctgagaaatatttagaagagagaatgcagacgacagatccgaacattccaccagtgcct
ccgtccactgcccagagacctccggaggtcgagcgtctccttggtctaggtgaaccagac
tctgatgaagagaaagaagaggtcatagacatacagaaggcttgggaagattttcaacaa
ccagatgtccgacatgaagatctggttggcgtgactggtacagcggctgttcttgagggt
cgccacccacctctacctgggttcaaaacccctgttgcacctgtacattcaaacactaca
tccttcctgtcggcatggaaaccagtgtcagagaaacgtaaacatgaaggtgaaagcgaa
gcagaaacacgaccctctaagagtgtacatcacttctgtactgcaactacagaataccaa
cttccagaacagtttgtaaacattgggagaaagtatcatacacccagcagatttgagttt
gccatgccagatcagaaattcaggtttggtagtagaggcccgagtgctatggaggagagg
cctcctttacagagtgcacaatctggagcaacagacacaggggactcggaacagcgccgg
atctctgccgcagcaagacgagtgttacagagggtggaagaagagggtgagggagataat
acaatggagacttggcagcagagggcagaggaagtgtttgaagcaccacagttcacagta
gaaggagctggaatttcaacacagtacaatgaatcacgtctctactggaccccagcccca
ccaaaactagatgtggctccagccaaggtcaaggacattttatttcctgaataccagggc
atacatgccatatgcttgttactcaaggacagaggtcagacaggccatatgtgtgttact
cttgtgttacagatagttcagtcttacacagatttctgcaaagtgttttatttaggttta
aggctatgtttgactgttcactgattgttatagagaccgacagttggtgcagagtcccag
gagatgcaagatatgatggaggaatcctcaagcagtgaggaggaggaggaggaaatggag
ataacagaggaggatagagaacagatggaacagcttgagaggataatgttaagacgtcac
aagtctatggaggatttgactgacttaatgatagcaactcgacagagagatgaggacatc
agagatggcaagctgtttccgtatgaagataggatagtgatagaaacagagaaagatgaa
aagcctcaagttctggaagagcatgaatctagttttgccaaggtcacgggaccagtactg
gactctgatcttttcccaacctttgtaccatggaggagatcgagttctgctccagacctg
aatgatgaggaagacgacacgttgatggtgtcgcaggattacaacatggctatggaggaa
attcagagacagaaacgtaacattcgggaatggaagatccagcagaaactagagcaacaa
caacaacaacagatgattgaacaaccagacttcgtggaggaggaagaaactatagaacag
ttacagagggttgacccacaggaatacagggcagacatcctgaaaattcattcatcaccc
aaacatgatgagcctactccagcagagcaggccctggctgcaggaagggcttatgttatt
ttgcccaaaaaaaagaagaaaaaagtgaagtccagtattacaatggcaaggctggatgaa
atagagaacttcttgaagaaaccgccacgacgtttagcacggtgtgagtcaatgatcagg
ataccaaagccaatagagaaagaattacgtgtaccaagtcgtataagagaaggtacaaga
agaagtatgccagatatcttcaactttgaggagtacggtagaagaaagggactcaaaaaa
gatgatgacacccgtgagtgggtacgtgacatttggaataattggtttgacgaggttttc
ccaccaacaccggaagattctgagtatgaggaggaggaagaattaacagaagaacaaata
gctgaaagagaagaagaagaaaagaaaaagaagaggaacaattcaatgtcaagctcagtg
ccggtgggtatggaatatatagaacctttgacagagtctgatgaaacgttggaagtacac
cagattatcatggaggagatagagaaattgacaggtgaaatgaacaaaatgaagaaacca
aaggcatttgacttcagcagacgaggagctttatataggaagattggctatctgaaggct
gcagaggatgatttaggaagagctatacaactagaaccattgttactggatgcttactgg
cacagacatctattgtacattctacaagataggaaaaaagaagcactggatgacctcaca
tttttactgaaacacacaaagagtcatgcaggggcatatagatctatggctgaaatatat
aagaagcaagatgacatcaccatggcaattgtgaactacacccaggcaataaaactcaat
ccacgtgatcatgaggcatattttgcacgtgcagagtgttacgagaaacgtggtgacatg
ctgctggccctggaggactactcatcatgtacaaaaatcaagccaaccagaactgatgct
atcctgaaacatggaatgtactactttgaaaacaagagctggggaaatgccatcaatgat
ttcactgatttactacgtgtagatcctttgaatgcctcagcccgagtactgcgaggacgt
gcctacgctgccatgggacagtggagcccttctgtagaagacctgtcagcagcaatacac
ctggacccaaaccactgggaggcgttctaccatagagcgtgtatacttagaaaagctcat
ccaaagcgtgccttacatgatttcagtgtatcactgttgataaatgacactgatgaaaat
attgggtcatatcttcatagaggaatcctctacaatgcaatgggaaaaccagaagatgct
attccagattttgagagtgttttaaagttgaacaaagacaatgcatgttcgcacgtaaat
ctcgggcttatcatgatgaaccattatgataactatcacagagccatcaagaggtttacc
tctgccatcaaggtggaccccacctatgtgagggcatatgtgtgtagaggggaagcatat
cacaaaatacatgagttgaagttagcattgagagattttacaagagcgatacatctacga
ccagatgtacatcactattacatgtacaggggacagcttctgcttgaactcggccatctc
gaccttgctgctttctgtgttagacatgcatcagagataggtagtgaggtgtcatccatg
ggacagcgccctacccaacaagctgtggtccactctttcctcaaaaactatgacaaggct
atagatgcgttacagacagcatcgcgttccaatcccacagcatccatgtacatgttgtta
ggtaaaacacagataaaggcaaagaaatttgaaaatgccatcacaagcttccagctggca
ctctctgtttatgaaccaaaggccaaaaaaagcagcacctttgtttatggaaaagagata
ccaatattattgcaacagaaaccatggaaggcacgagatccttggccacaggaggcagcc
gatgcccattacctgattggtcagtgtagcatggagctgagaaattacctcgatgccctt
aatgcattcacagatgccatcaaactgaattcttccatggcagaggcactgtatcagaga
ggtatggcacggatgaaactgaagatgtctaaaggtatacaggatttcaacagggccttg
gcaatcaatccaacgatattccaggcgtacctgtcacgtgcctgttactatggaactaaa
ggcaactatacaaaggcaatcctcaactgtaatgaggcaatcaaactccagccaaacagt
gtcagagcttatctttatagaggggcattgaagtaccatatcaaggcttacgagctggcg
atcagagatctgtccaaggcagcaagtatagacagtacatgtgcactagcgtacttcaac
agagctgtatgctaccaggagaatagggactatcaaaaggctctcacagactatgggatt
gtcctacttcttggtgattcactcaaactgaaggtgctgattaaccgaggattactgtat
tttgagaagcgtgattacacgaatgccctgtatgatttcaagatgtcggccaacatgaat
cccaacgatcacaagatccttcatacactaggcctctgctatcacaagttaggacggctc
caagaggcagttaaaacattcacaatgtgtgtcaagagccagcccttcttcctggatggt
ataatagcaagaggaaatgtctacatggactacggacatgagaagggccttagatatgca
atgcgtgattatgagcgagtgttacgttttgacccaatgaatctgccagcacgtgtaaat
ctagcgtacacattacaagtgtcaggtcacttcatgcaagcgtggagacaattcacaact
gcaatagatctgaaacctaattacaagccagcattagagggtcggtcaataattaacctc
cagatgagtgatacgtttgcctcctaccaggacatcaacactgccatcaaagtgaacccc
acagcagagcttctcacaaacagaggagtcatacatcagtttatggacgaccgtgtaaat
gctatgcgtgactaccaggcagctattgaacttgatgagacctattccctggcgtacttc
aatgctggaaatgtgtacttccacagtagacagttctcacaggcactggaatattttaca
aagacagtccagtataacccacaggatgagtctgccatcctgaacagagctatcactaga
gtaatgttgaaggattccaagggagcactggaagatttcagagctgccatcaagttgagc
ccttactccgcccacatgtacatgaacaggggtaatctgtatgcctcaacacaacagttt
gaaatggcagaaaaagacttcactaaagctttagaactaaatcctgatgaccctctggtg
ctgaaacgtagagctgatgtgcgtggaaaacttggcaagaaaacagaggcagtatccgac
tacagacaagctatagaactccagggcagaattagatatctcaagactggaaaatga
DBGET
integrated database retrieval system
