Mercenaria mercenaria (northern quahog): 123558244
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Entry
123558244 CDS
T07835
Name
(RefSeq) gamma-aminobutyric acid receptor alpha-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04080
Neuroactive ligand-receptor interaction
mmer04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
123558244
04082 Neuroactive ligand signaling
123558244
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmer04040
]
123558244
Ion channels [BR:
mmer04040
]
Ligand-gated channels
GABA-A
123558244
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
123558244
NCBI-ProteinID:
XP_045206057
LinkDB
All DBs
Position
5:complement(28580623..28593560)
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AA seq
413 aa
AA seq
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MILIIPCPNIQSILFLEKPLVIKTDILVRSMGPVSERSMDYSMDCYFRQLWVDERLALNV
SLPNISLNIKFLERLWYPDTVFLNGGKSFVHMVPMPNKFFRINKDGSVLYSQRLTIKATC
KMRLEKYPLDSQRCQLYVGSFAYSIEEVVYEWRFGRQKSVEIAADMTLSQFDLLQAPCFN
STSILRGAPHSVLSIHFYLRRHMGFFLINVYVPCCLLVVLSWVSFWINREATSDRIALGT
MTVLTMTFIGLDNRNDLPRVSYSTALDIYVAICFVFVLATIIQFAAVHYYTKFGCGEGPQ
LARYIAKEVELEEILEEQSGEEAHSSTETTRENGHKRHVYIKNGTPNQSALFKCWNCFFG
TKNVPHSSMLGNVLGLNSVSKIDKMSRIIFPVVFLAFNILYWCIYLSDTSQLL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgatattaataattccatgtccaaatatacagtcaattttatttctagaaaaacctttg
gtgattaaaacagatattttggtgcgttcaatgggtcccgttagtgaaagaagcatggac
tactccatggattgctattttcggcaactctgggtggacgaaaggcttgctttgaatgtg
tcacttccaaatatttcgctcaacattaaattcctagaacgtctgtggtaccctgatact
gtcttcctgaatggcggaaaatcttttgttcacatggttccaatgccaaataagttcttc
cgcattaacaaagacggttctgttttatactcacaaagactgaccattaaagcaacatgc
aaaatgcgacttgagaagtatccattagattcgcaacggtgccaactttacgtgggaagc
tttgcctattccatagaagaagtagtatacgaatggcgatttggtcgacagaagtcggtt
gaaatagcagctgatatgactttgtctcagtttgacttgctccaagcaccgtgctttaac
tcaacttcaatactcagaggagctccgcattccgttttgtccatacacttctatctacgg
cgacatatggggttctttttaattaatgtgtatgtaccatgctgccttcttgttgtgcta
tcatgggtttctttctggataaacagagaggcaacatcagacagaatcgcgcttggtaca
atgacagttctgacgatgacgtttataggtttggacaaccggaacgatctgcccagggta
tcatactcaacggctcttgacatctacgttgccatttgttttgtatttgtcctggctaca
atcatccaatttgctgcggtccattattacacaaagttcggatgtggtgagggaccacag
cttgcaagatatatagctaaagaagtggaacttgaggaaattttggaagaacagtctggc
gaggaagcacacagcagtacagaaacaaccagagagaatggtcataaaagacatgtttat
attaaaaacggtacaccaaaccaatcagctttatttaagtgttggaactgtttctttgga
acgaaaaacgtacctcattccagcatgttaggcaatgtgctaggtctgaacagtgttagt
aaaatagataaaatgtcaagaattatatttcctgtggttttccttgcatttaacatatta
tattggtgtatatatctatcagatacgtcacaattgttatag
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