Mercenaria mercenaria (northern quahog): 123558337
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Entry
123558337 CDS
T07835
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38-like isoform X1
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmer01002
]
123558337
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123558337
Enzymes [BR:
mmer01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123558337
Peptidases and inhibitors [BR:
mmer01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123558337
Ubiquitin system [BR:
mmer04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123558337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Yopt
Motif
Other DBs
NCBI-GeneID:
123558337
NCBI-ProteinID:
XP_053399267
EnsemblRapid:
LOC123558337
LinkDB
All DBs
Position
5:40968390..41019492
Genome browser
AA seq
968 aa
AA seq
DB search
MSWLRSKSYSLKVGKGKVKTERMDVILKGILSSNHPYNIKRDLLIKIAEKGSSSQSSGTV
QSVLELTVKWFLEGDSDLQCDYGLEIYKSWARHNLVTFEEFFNKDYLLTILSKKYRNSGN
VGILLTESMKLLQRTSMFRQHCTVIEAKAVSYVKEHPYIECLTNFAEFLLEFKECVPKGD
LTLHFCTNLILSLSLCSPPEVESGLVVYIKSANTVASLLSQIWSSSDSQVVLGCLKEIFR
IISSPCDVEPSVCLGSLVQYLPVEMIGTVVKNVISDSSIDNNSMVTAIQRIIDWLQWPTA
RFVDHWVIAFLKGLASVQKYSILITVTENKADQIFEKLQFAPVREPGLNIICHMLLSFQH
SPEPFHKILPMVPKIVGEWKADSSEFSQHLVTRLAELLHVLMYLHGGFPELYDPVYEVIK
VFPKPSPDVIKFKLLESKWTAHRDGQAYVPRSYQPKAEMGKTGLFNLGNTCYMNSIIQAL
YMCDSFRNGLLQHQPSLEQSLVVKLQYVFAFLSLSQRPAYAPVNFLAASRPVWFTAGFQQ
DCSEFLKYLLDQLHEQETKYLTASRSPKSPSKEKRKSESTKPTLIEENFGGTMSTTLTCL
NCKAESKKEEMFMDLPLAFPDYNSTSQKSLAGGDSKMSTRSHTTTSTAPRPTTSVPPEEM
NCLHLNDLLKHYLKPEKLVDDNKYFCDNCGGLQEGERKIKIVKTPEYLILTLLRFSYDTK
LQSRSKIFREVKYPKTLLIPVEDEARGATSERRKRCNSLRSSVANQLEKCGLDMDVDCAD
VYSLCSVVVHSGTSSDCGHYYCYARHSVITNSENVQANMQDFSHEDEIDFLQDKWYLFND
SRVSYASYNSFCNVSQRFTKDTAYVLMYRKIDAEKIGVDYKIGLDQWIQPTKIDAPLRSD
LRAAVVKDNKIYLQEQENAAAKNSSRKRPNDSTWYNWKDDDDKGGTGPCGGGGGSLGDLD
TSGARFVF
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgagttggcttagatcaaaatcgtattctctgaaggttggcaaggggaaggtgaaaacc
gagaggatggatgttatattgaagggcattctctcttcaaaccacccctacaatatcaag
agggacttgcttatcaagatagctgagaagggatcaagttcccagtcatcggggacggtt
cagtcggtacttgaactcacagttaaatggtttctggaaggagactctgatctgcagtgt
gactatgggttagagatttataaatcatgggcgcggcataatcttgttacttttgaagaa
ttctttaataaagattacttgctaaccattttgtcaaagaaatatagaaatagtgggaat
gttggtattctgttaacagaaagcatgaaacttttgcagaggacgtcgatgtttagacaa
cattgtactgtgatagaggcgaaagctgtgagctatgtgaaagaacacccgtacattgag
tgcttgacaaactttgcagaattcctgctagaattcaaggagtgtgtgccaaaaggggac
ttgactttgcatttttgtacaaacttgattctctcccttagtttatgtagccctccagaa
gtggagagtggtttagtagtctacatcaaaagtgccaacacagttgcttccctattgtca
cagatctggagctcctctgattcacaggtggttctaggctgtttaaaggagatattcaga
ataatatcatctccctgtgatgtggaaccatccgtatgtctcggttccctggttcagtac
ctacccgtggaaatgattggcacagttgtaaagaacgttatatcagactcgagtatcgac
aacaatagcatggttacggctatacagcggattattgactggttacagtggccgacagca
cgtttcgttgaccattgggtcatagccttcctcaaaggtcttgcttctgttcagaagtac
agcatcctgatcacagtcacagagaacaaagcagatcagatatttgagaagttacagttt
gccccagttagagaacctggattaaacatcatctgtcacatgttactgagcttccagcat
tcacctgagcctttccacaagattttaccaatggttccaaaaatagttggagaatggaaa
gcagacagctcggagttttcgcaacatcttgtcacaagactcgcagaattacttcacgtt
ctgatgtatctacatggcggcttccctgaactctacgaccctgtatatgaggttataaag
gtattcccaaaaccgtctcccgatgttatcaaattcaaattactggagtcaaagtggaca
gcacatcgtgatggacaagcatacgttcccagatcataccagccgaaggcagaaatggga
aaaacagggctgtttaaccttggaaacacatgctatatgaacagtataatacaggcacta
tatatgtgtgatagtttccgcaatggtttactacagcaccagccgtcacttgaacaatcg
ttggttgtgaagttacagtatgtgtttgctttcctcagtctctcacagagaccagcttat
gccccagttaatttcctggctgcttccaggcctgtatggttcacagctggtttccagcag
gactgttcagagtttctcaagtacctgctagatcagcttcatgagcaggaaactaaatac
cttacagctagtagaagtcctaagtctccgagtaaggagaaaaggaaatcagaatctaca
aaaccgacattgattgaagaaaattttggaggtactatgagcacaactctaacgtgtttg
aactgtaaagctgaatcgaaaaaggaagaaatgttcatggatttaccccttgcattccca
gactacaattcaaccagtcaaaaatcccttgccggtggcgatagtaagatgtccacacgt
tcacatactactacaagcacggctccaaggccaacaacgagtgttccgcctgaggagatg
aactgtttacatttaaatgatctgttaaaacattatttgaaacctgaaaaactggtcgat
gataacaaatatttctgtgataattgtggcgggcttcaggaaggggagagaaaaattaaa
attgtgaagacgccagaatatctcatccttactttgctcagattttcttatgatacaaaa
cttcagtcccgttcaaaaattttcagagaagtaaagtatccaaagacattacttattcca
gtagaggatgaagcacgaggtgcaacctcagaacgaaggaaaagatgcaattcgttacgt
tcctcggtcgcaaaccagttagaaaaatgtggtttagatatggatgtagactgtgcagac
gtttactctctgtgttcagtagtggtgcattctgggacatcatcagactgcggacattac
tattgttatgcaagacattctgttattacgaattcagaaaatgtgcaggcaaatatgcag
gacttttcacacgaagatgagattgactttctgcaagataaatggtatctgtttaacgat
agccgtgtgtcgtatgccagttataactcgttctgcaatgtgagtcagcgttttaccaag
gatacagcatacgtattgatgtacagaaaaatagatgcagagaaaattggagttgactac
aagattgggttggatcagtggatacagccgactaaaatagatgctccgctgaggtctgat
ttgagagcagctgttgtaaaagacaacaaaatttacctacaagaacaggaaaatgctgca
gccaaaaattcgagtcggaaacgtcccaatgattccacatggtataactggaaagacgac
gatgataaagggggcacaggaccatgtggaggtgggggaggcagtcttggagaccttgat
acatctggggcaagatttgtcttctaa
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