Mercenaria mercenaria (northern quahog): 123558506
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Entry
123558506 CDS
T07835
Name
(RefSeq) ATP-dependent DNA helicase Q5-like
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123558506
Enzymes [BR:
mmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
123558506
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
123558506
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SRI
RecQ_Zn_bind
ResIII
AAA_14
Motif
Other DBs
NCBI-GeneID:
123558506
NCBI-ProteinID:
XP_053399831
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All DBs
Position
5:complement(69543064..69563689)
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AA seq
884 aa
AA seq
DB search
MELELGTTLSKVFGHKNFRSDVQKNAVLTIVEGKQDVFVCMPTGAGKSLCYQLPAVVSPG
ITFVVSPLIALMQDQLEHLDSIGVKSETLNSKMSVEERKRVLSDLDKEKPKTKMLYITPE
QADTDNFKQLTESLTKRKLVKYFVIDEAHCVSQWGHDFRPTYLRLGYFRTKYLKGIPCIA
LTATAPKQVIEDIIKQLRLKEPIAKFKQSVFRPNLFYDVKMKDTIGDVYEDLKGFALKAL
GGVAEEGEDWNSYGCGIVYSRTRDGCEEVSHHLSRKGIPARPYHAGLKNGIRETNQTEWM
QGKFPVIVATISFGMGVDKANVRFVAHWNVPKSMAGYYQESGRAGRDGEKSYCRLYYSRE
DRNTVAFLINHEAKRWKKKDKETVRLQLKAANKNFEHMISYSEEVRCRHWSISQFFGDEK
PDCNKSCDACKEPRSVEKNLAELQRGLFASVNKTKGGGTMYYVDEDVSGDMYGGGRKGAK
MDTDDYDDQYDSDEDDDSESAKERRDRKERTNFIKNQFKKRKGDVETSRPEDTFIPPSED
CPLRDAASQRIPKLTVAQREHCMALLEKALLDNYVQYYKDIPTKMAAKDFVPRCCAIDLE
YEVFKANRLHNIYKASVMRSVSEIKKFTALKDLHTSLVPKWSSTSDASPSDTGGDKDISS
HSNDNGKSCDKKLNGESVLEAVGDTEVTASLYDGDKDKTSESNENVESKEEKDTKTADAT
AVKIEEKPVRPKIVYFFERGDSLKQELGEENGNLMKDNTEESSFKIDGALNHSHGVKRPH
DSKDDRHSKHRKVEKKPSSRGDASATKLKECADVVVKYLTPHFKGGQIASKELFKKTAKM
LSHKVVEKTKDKPPEKVKEVVKAMIKDLFKKHQKISSEEHISSI
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggaactcgaactgggaacaacgctctctaaagtattcgggcataaaaactttaggtca
gacgtccagaaaaatgctgttcttacaattgttgaaggtaaacaggatgtatttgtgtgt
atgccaacaggagcaggtaaatctctgtgttaccagcttcctgcagttgtctcccctggt
ataacatttgttgtctcccctcttatcgctctgatgcaagaccagttggaacatttggat
agcattggagtaaagtcagaaacgctcaactcgaaaatgtcagtggaggaacgtaaaaga
gttctgtcagacttagataaagaaaaaccaaagactaaaatgttgtacattaccccagaa
caggcagacacagacaattttaaacaactgactgagagccttacaaaaagaaaattagta
aaatattttgttattgacgaagctcattgcgtatcccagtggggtcacgattttcgacca
acatatcttagacttggttattttcgtacaaaatacttaaaaggaattccttgcattgcg
ctgacagcgacggctcctaaacaggtcatagaggacatcataaagcagttaagactgaaa
gaacccatcgcaaagtttaaacaaagtgttttccgtccaaatttattctatgatgtgaaa
atgaaggacactataggggatgtgtatgaagatcttaaagggtttgcactcaaggcactc
ggaggagtagcggaagaaggggaggattggaattcctatggttgtggtatagtttactcc
agaacaagagatggttgtgaggaggtgtcacaccacctatccagaaaagggataccagct
agaccgtaccatgccgggctcaagaatggcataagggagacaaatcaaacagagtggatg
cagggaaaatttcctgttattgtagcaaccatcagctttggcatgggtgtggacaaagcc
aatgtcagatttgtagctcattggaatgttcccaagtcaatggcgggatattatcaggag
tctggacgtgctgggagggatggtgagaagtcgtactgtagattatattactcgcgggag
gacagaaatactgttgccttcttgattaatcatgaagcaaaaagatggaaaaagaaagac
aaggagactgtaagactacaattaaaagctgctaacaagaactttgaacatatgatcagt
tacagtgaggaagtcagatgtcgtcactggagtataagtcagttctttggagatgagaaa
ccagattgtaacaagtcatgtgatgcctgcaaggagccgaggagtgtggagaagaacctg
gccgaactacagcgtggactgtttgcctcggtaaacaagactaaaggtggtggtaccatg
tactacgtagatgaagatgtttcaggagacatgtatggtggaggcagaaaaggtgctaaa
atggatacagatgactatgatgaccagtatgacagtgatgaggatgatgactctgagtcg
gctaaggaaagacgagatagaaaagagaggaccaatttcattaaaaatcaattcaaaaaa
cggaaaggagacgtggagacgagtagaccagaggacacttttataccgccaagtgaagac
tgtccactgagagatgctgctagtcaaaggattccaaaacttactgtagctcaaagggaa
cattgtatggcacttctggagaaagcattattagataactatgtgcagtattacaaagac
attcctactaaaatggctgcaaaagattttgtgccaaggtgttgtgctatagatctagag
tatgaagtattcaaagctaacagattacataatatctacaaagcatctgtgatgagatcg
gtgtctgaaatcaagaaattcacagccctgaaagacctccatacctccctagttcctaaa
tggtcctccacttcagatgctagtccctcagacactggtggtgataaagacatatctagt
cattccaatgacaatggaaagagctgtgataaaaaactaaatggagaaagtgtattagaa
gctgttggtgatactgaagtgacagcaagtttgtatgatggtgataaagataagactagt
gaatcaaatgaaaatgtggaaagtaaagaagaaaaggatacaaaaactgctgatgcaaca
gctgtgaagattgaagaaaaaccagttagacctaaaatagtgtatttctttgaaagaggt
gattcgttgaaacaagagctaggggaggaaaacgggaatttaatgaaagataacacagag
gaaagttcttttaaaattgatggtgcattaaatcacagtcatggagtgaaaagaccacat
gattcaaaggatgatagacattctaagcacagaaaagttgagaagaagccatcatctaga
ggtgatgcctcagcaaccaaactgaaggaatgtgctgatgtggttgtaaagtaccttaca
ccacattttaaaggcggacaaatagcgtcaaaagaactatttaagaaaactgccaaaatg
ctatcccataaagttgtggagaaaactaaggacaaaccacctgagaaagtgaaggaagta
gtaaaggctatgataaaagacctgtttaagaaacatcagaagatttcctctgaagagcat
atttcctcaatatag
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