KEGG   Mercenaria mercenaria (northern quahog): 123559369
Entry
123559369         CDS       T07835                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC3-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
mmer  Mercenaria mercenaria (northern quahog)
Pathway
mmer03020  RNA polymerase
mmer03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mmer00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    123559369
  09124 Replication and repair
   03420 Nucleotide excision repair
    123559369
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmer03021]
    123559369
   03400 DNA repair and recombination proteins [BR:mmer03400]
    123559369
Transcription machinery [BR:mmer03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     123559369
  RNA polymerase III system
   RNA polymerase III
     123559369
  RNA polymerase I system
   RNA polymerase I
     123559369
DNA repair and recombination proteins [BR:mmer03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      123559369
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG CEP76_N
Other DBs
NCBI-GeneID: 123559369
NCBI-ProteinID: XP_045207036
LinkDB
Position
10:36463854..36491699
AA seq 149 aa
MAGVLFEDIFDVKDIDPDGKKFDRVSRLFCESESFKMDLILDVNTQLYPMDLADKFRMVI
ATTLNEDGTPADSEYNPTDTGPSRADSFEYVMYGKVYRLEGDEISSDSSRLAAYVSYGGL
LMRLQGDANNLHGFEVDSHVYLLMKKLAF
NT seq 450 nt   +upstreamnt  +downstreamnt
atggcgggtgtgttatttgaggacatatttgatgtgaaagacatcgatcctgatgggaag
aaattcgacagagtgtcaagattgttttgcgaaagcgagtcattcaaaatggacctcatc
cttgatgttaacacacagctctatcccatggaccttgcggacaaattccgtatggtgatc
gctaccacactgaatgaagatggaacaccagccgatagtgagtacaacccgactgacacg
ggcccatctcgtgcggacagcttcgagtatgtgatgtacggtaaagtgtaccgactggaa
ggcgacgaaatatcctctgactcttcaagattagcagcctatgtgtcatacggtggtttg
ttgatgagattgcaaggcgatgccaacaacttgcacgggtttgaggtcgactcgcatgtg
tacctgctgatgaagaaattagcgttctga

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