Mercenaria mercenaria (northern quahog): 123559387
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Entry
123559387 CDS
T07835
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmer03036
]
123559387
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mmer04812
]
123559387
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
123559387
Cytoskeleton proteins [BR:
mmer04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
123559387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT
CEP104-like_TOG
HEAT_EF3_N
HEAT_EZ
Cnd1
TOR1L1_N
Vac14_Fab1_bd
HEAT_2
RTP1_C1
HEAT_DAAF5
Adaptin_N
HEAT_Maestro
HEAT_ECM29
MMS19_C
TAN
PDS5
UTP20
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
123559387
NCBI-ProteinID:
XP_053408706
LinkDB
All DBs
Position
10:complement(35618022..35764984)
Genome browser
AA seq
1498 aa
AA seq
DB search
MASGSLSDFVPNVTTQDTRKRQQCYEVMSRYLSDPRSSLACDDMDALVEGLTAWVTCSNY
KISLNGLEILCLMIDRMGEEFKPHVTTVLTACVDRLGDSKEQVREQAQQLLLKLMMPAST
PQYVFERIMGTFNHKLWHVREGVLLCLQNTINRYGARCLQLSKIVPSICKLLEDQTPQVR
EAAMNTLAEIYRHVGEKVRNDLTKRSNIAPQRLNQVYAKFDEVKTSGNMLATADLGPGRA
DREDHDEPDFARPLSTKVPHAKRLPSSASSTVSTGSASGKRSGLGLSKSSSSTAARLSFR
RKSAPESTGGGAGAVDEEFFIRSFEDVQKVQMFSARDLTDHLNKCKDTLADTNIAWEKRV
DALKILRGIVVAGAPEYDDFYPFLRVLEPCYMNSIKDLRSQVVREGCITVAYYSQRLGNK
FDHSAETLLPALINLIPNSAKIMSTSGIMCIRFILQYTFSSRLIPVITNNMSSKASIIRR
LSCEFLNQILHTWPTHILEKHIAIIQESIKKGISDADSEARSFARKSFWGFADHFKDQAD
ALLNHLDPAKQKALQGELSNSSSNNSLNSGERLAAGRVRARSASQDRGYESSTLGRINKK
GHQRFRSARSDTGGDLDNDDIDGQQEDLETFNEPPSSHRQNGMMRSSSAVDIANRSGGAV
STSTLPRRRSSSTMLAAKLSNGSTQSLPRQKSHVVPSSYSSSRISPQDHHGRNRTRLGTS
QSQPNSRSSSPTPRASYLTHTTGHAAPLTPSRPRKASSISNPRSQGTSRETSPSRSVKSS
GYGLPGRERRFSGSKSAGKSGLTVKTLKPGQDVEELLADALRQPIRKRYESYDSDDNASE
TSSVCSERSFSSYGKTSEASNSTTEKERWPRRLSTPSKDMGEILALLQSSSYQDRKEGVV
SLQKLLRQNRFLTRIELKKATEIFTRMFHDPHSKVFSLFLEMLIDLIQLHSRDMTDWLYV
LLSRLLNKLGADILGSLQAKVQRTLDATRENFPSDLQFNILTRFMIDQTQSPSMKVKLAM
LNYLNTLVPCMQADDFTNSSDTRLVVSRIITWTNEPKNVEVRKSAQLVLFALFNLNPSEF
TMMLSGLPKAFQDGATKILNHHMKGAHEPEVLTPRNTASPQMHQNRSRPSSRGPYSRDEA
DTENMNPEDIYNSIKKTSADIQNLSFNSKLDQFDDVKKRKDFTSQDSGIQDLRNDSPDAG
ESRKPQYNPSRYSDESTLNGYNRSNQAEAVFNAENDISFNEDPFRLLLGWNLKEGSLDQE
EMINEILKELSNHNERHEERKNTMLSLIKLTREGMFELWDEHFKSILLILLETLGDDDVQ
VRSLALRVLREILRNQSQRFEEYAELTMLRILEAHKDPAKEVVRAAEECAATLASYTPPI
QSIRILIPIVKAAELPMNLAAIKMQTKVVEQMSAEELLPTLPEAMPGLLKGYDDSESSVR
KASVFCLVAIYMVVGESLRQYLTDLNGSKIKLLNLYIKRAQAQKDSGKLLSPHSSDTS
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcgggtcactgtctgactttgtgccgaatgttaccacacaggatacaagaaaa
cgccagcaatgttacgaagtgatgtctaggtatttgagtgatccgcggagctccctcgcg
tgtgatgacatggatgcattggttgaaggccttactgcttgggttacgtgtagtaattat
aagatttccctcaatggactagagatcctttgccttatgatagatcgaatgggcgaagag
ttcaaaccccatgttacgacagttcttacagcttgtgtagacaggcttggagactcaaaa
gaacaggtgcgggagcaagcccagcagttgttgttgaaactaatgatgccggcttcaact
ccacagtatgtatttgagagaatcatgggtacgttcaaccacaagctttggcatgtcagg
gaaggcgtactgttgtgcctgcagaacacaattaacaggtatggtgcaagatgtttgcag
ttgtcaaaaattgtgccatccatttgtaaacttctagaggatcagacaccacaggttcgg
gaagcagcaatgaacacattagccgagatctaccgacatgtcggagagaaagtgcggaat
gatctcacaaaacgatcaaatatagctccacagagattaaatcaagtatatgccaagttt
gatgaagtaaagacatctggcaacatgttagctacagcagaccttggtccaggaagggcg
gacagggaagatcatgacgaaccagactttgcacggccactttccacaaaggttccacac
gccaagaggttaccaagctctgccagctccactgtctccacggggtccgcatctggaaag
aggagcgggctcgggctttcaaaatcttcatcaagtacagctgctagactgtcatttagg
aggaaatctgctcccgagtcgacaggaggtggtgctggggctgttgatgaggaattcttc
ataagatcatttgaagatgttcagaaagtacagatgttttctgctagagatcttacagat
catcttaacaaatgtaaagacactttagccgatacaaacatagcttgggaaaaacgggta
gatgctttgaagatattacgtggtatagtagtagcgggagcaccagaatatgatgatttt
tatccatttttgagggttcttgagccgtgctatatgaatagtataaaggacttgaggtct
caggttgtgcgagaaggatgtatcacagttgcgtattattcacagcgactgggtaacaag
tttgaccacagtgcagagacgttattacctgccctcattaatctcattccaaatagtgcc
aaaattatgtcaacatccggaattatgtgtattaggttcatattacagtatacattttca
tccagactcattcctgtgatcaccaataatatgtcatccaaggccagtatcattagaagg
ttaagctgtgagttcctaaaccagattttacacacatggccaacacatatactagagaaa
catattgccataatacaagaatccattaaaaagggtatcagtgatgccgactctgaagcc
agatcatttgctcgaaagtctttctgggggtttgcggatcatttcaaagatcaagcagat
gccttgttaaatcacctagatccagcaaaacagaaagctttacaaggtgaactgagtaac
tcatctagtaacaactctctcaacagtggagaacggttggctgctgggagggtgcgggca
cgttcagctagtcaagatagaggatacgagtcaagtactttaggtcgtattaataaaaaa
ggtcatcagcggttccggtcggcacgcagtgacacaggaggagacctcgacaatgatgac
atagatggccaacaggaagatttagaaacatttaatgaaccgccatcgagtcacagacaa
aatggaatgatgcgttcgagcagtgcggtagatatcgctaaccgatcgggcggagcggta
tctacttcaacactgcctcggagacgctcgtcttcgacgatgcttgcggcaaaattgtct
aatggatcaacacaatcgctaccacgtcagaaatctcatgttgtaccctcgtcatattca
tccagtcgtatttcaccgcaagatcatcatggtcgtaatcgtacacgattaggaacctct
cagtcgcaacccaatagccgatccagttcacccaccccacgtgccagttacctgacccac
actaccgggcatgcagctcccttgacccctagtcgacctagaaaggcatcctcaatctcg
aacccgagaagccagggaaccagcagagagacaagtccatccagatctgttaagtcatca
ggctacggtttaccagggcgagaacgaagattcagcggcagtaaaagtgctggtaaaagt
gggctgactgtgaaaacattgaaaccaggtcaggatgtagaggaacttctggctgacgca
ctgcgtcagcctataagaaaacgatacgagagttatgattcagatgataatgccagtgaa
acttccagtgtgtgttcagaaaggtcatttagttcatacgggaaaacgtcagaggcatca
aactccacaactgaaaaagaaagatggcctcgccgtctctcgacaccgtccaaggatatg
ggagaaattctcgctttgttgcagagtagctcataccaagacagaaaggaaggtgtagtg
agcttacagaaattacttcgtcaaaatagatttttaacgcggatagaattgaagaaggcc
acagaaatatttacaagaatgtttcatgatccgcatagtaaagttttcagtttatttctg
gaaatgttaatagatctgatacagttgcacagtagagatatgacagactggttatatgtg
ttattgtcacggttactgaataaactaggagcagatatcctcggttcattgcaagccaaa
gttcaacgaacgctagatgccaccagggaaaattttccgagtgatcttcaatttaacata
ttaacacggtttatgatcgaccaaacacagtcacctagtatgaaggtaaagttagccatg
ttgaattatttgaatacactggtaccttgtatgcaagctgatgatttcaccaactccagt
gacacaagacttgtcgtctctcggattatcacatggacaaatgaaccaaaaaatgttgaa
gttagaaagtcagcacagttggtattgtttgcattattcaacttgaatccttcagagttt
actatgatgttgtctggcttaccgaaggcattccaggatggggcgaccaaaattctcaac
catcatatgaagggtgctcatgaaccggaagtgctcacgcccagaaatactgccagccca
cagatgcatcagaaccgtagtcggccctcatctaggggaccgtatagcagagatgaggcg
gacacagaaaacatgaaccctgaagacatttataattctataaagaaaacatcagctgat
attcaaaatctcagttttaatagtaaacttgatcaatttgacgatgtgaaaaagcgcaaa
gactttacgtcacaagatagtggtattcaggatttacggaatgacagtcccgatgccggg
gaatccagaaagccgcagtacaatccttcacgttattcagatgagagcacattgaatgga
tataaccgaagtaaccaagcggaagcagtgttcaatgccgaaaatgatatttctttcaat
gaagatccattcagactattacttggttggaatttaaaggaggggtccttagatcaagaa
gaaatgatcaatgaaattctcaaagaactttcaaatcataatgaaaggcatgaggaacgt
aagaacacgatgttgtctctaatcaagttgacaagggagggtatgtttgagctctgggac
gaacattttaagagtatcctgctaatattactggaaactctcggggatgatgatgttcaa
gtgcggtcattagcattgcgggtgttacgagagatcttacgtaaccaatctcaacggttt
gaagagtacgctgaactcaccatgctaagaattcttgaagctcacaaagaccctgccaaa
gaggttgttcgggcagcagaggaatgtgctgctactttagcgagttacacaccaccaatc
cagagtatacgtattttaattccaattgttaaggcggcggagttaccgatgaacttggca
gctatcaagatgcagaccaaggttgtggagcagatgtctgcagaggagctgttacccaca
ttgccggaggcaatgccggggcttcttaagggatatgatgacagtgagagcagtgtacgg
aaagccagcgtgttctgtcttgttgccatatacatggttgtcggagaatctctgcgacaa
tatctcacagatcttaatggtagtaagattaagttattaaacttatacatcaaaagagca
caggcacagaaagatagtgggaaattactgtctcctcatagttccgacacttcatga
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integrated database retrieval system
