KEGG   Mercenaria mercenaria (northern quahog): 123559527
Entry
123559527         CDS       T07835                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
mmer  Mercenaria mercenaria (northern quahog)
Pathway
mmer03020  RNA polymerase
mmer03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mmer00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    123559527
  09124 Replication and repair
   03420 Nucleotide excision repair
    123559527
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmer03021]
    123559527
   03019 Messenger RNA biogenesis [BR:mmer03019]
    123559527
   03400 DNA repair and recombination proteins [BR:mmer03400]
    123559527
Transcription machinery [BR:mmer03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     123559527
Messenger RNA biogenesis [BR:mmer03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     123559527
DNA repair and recombination proteins [BR:mmer03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      123559527
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N RNA_pol_Rbc25
Other DBs
NCBI-GeneID: 123559527
NCBI-ProteinID: XP_045207356
LinkDB
Position
10:31026778..31027895
AA seq 172 aa
MFYHVSLEHEILLHPRYFGPNLLNIVRQKLFSEVEGTCTGKYGFVIAVTTIDNIGAGMIQ
PSRGFVVYPVKYKAIVFRPFKGEVLDAVVTQVNKVGLFTEIGPLSCFISRHSIPADMEFD
PNSNPPCYKTKDEDVVIQQDDEIRIKIVGTRVDAKDIFAIGTLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttctaccacgtgtcgttagaacatgagattcttcttcacccaaggtactttgggcca
aatcttttaaacatagtacgacagaaactattttctgaagttgaaggaacttgcactggg
aaatatggatttgtaattgcagttactacaattgacaatattggtgctggaatgatccag
ccgagtcgtggttttgtggtttatccagtgaaatacaaagcaattgtctttcgtccattc
aaaggagaggtacttgatgcagtcgtaacacaagttaacaaagtgggattgttcacagaa
atcggaccgttgtcatgcttcatatcacgtcattccataccggcagacatggagtttgac
ccaaattctaacccaccatgttacaaaacaaaagatgaagatgttgttattcagcaggat
gatgaaattcgaattaaaattgttggtacaagagtagacgctaaagatatattcgctatt
ggtacattgatggatgactaccttggacttgttagctga

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