Mercenaria mercenaria (northern quahog): 123559858
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Entry
123559858 CDS
T07835
Name
(RefSeq) uncharacterized protein LOC123559858
KO
K04729
myeloid differentiation primary response protein MyD88
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
123559858
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Gene cluster
GFIT
Motif
Pfam:
TIR_2
Death
TIR
DUF4780
Motif
Other DBs
NCBI-GeneID:
123559858
NCBI-ProteinID:
XP_053372640
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All DBs
Position
10:4021664..4051811
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AA seq
872 aa
AA seq
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MDDDKLILPPIYNFTPLRALRVASRWKLSRFLDLEGVLVVLNNDGIDSDVVNDYSGLAEL
VGFNYQDIMNMKRQRSPTTELLDLWTGQNGNVGELWMYLYMMERYDVLTDCRRPIVHDCS
EYETYQQLKLDAERHNTEQDPTVTTSEMRVDETKFATLEDVRDYLMYEAQQQQKLDTERI
NVEQDPTVQRRGKRTAYDAFICYTAEDENDRKFLYKIIEELEVKRGLKLFVPGRDDLPGS
AEYTITAYLIEKRCRRVVILMSRKFLQSEACDFQVKFAHSLFPAGRSKKLIPVIREKNTQ
MPRILSILGVCDFTKPDMVEWVWNRLFATIIAPTGPTTYFEDGDPSNPFNISDESLRDIK
YPSHCRLDEHEDSLNHLNEQSRTRKRPIDVCADSQPREPMEYDVSSMSWGQPTSNMQSQS
PSSVKSSSLPPETKGKSSQKGATGSVKQSKPVLAKKPDKLKNKKQVSSQRQQLSTYSKTI
SSSVSTEHFVALRTTSRRKLSSFLDLEGVLVVVDNDGIDSDIVNDYSGLAELAGFNYQDI
MDMKRQRSPTTELLDLWTGQNGNVDSIWFSEVVAILLFYVHSNIAVVCVNYIISAEIFIT
NFSSITSFDNVLMFANCYFVKKANILHYVIFISVQDCVKYEEQQKLKPGPLAPVRESKTF
YDAFICYTAGDENDRQFLYKMIDELEVKRGLKLFVPGRDDLPGSAEYTITAYLVEKRCTR
VVILTSRMFLQSAACDFQVKFAHALSPGARSKKLIPVIHEKNTQLPRILRFLPVCDFTKS
EMVEWVWYRLFTAIIAPVGPTTYFEQGDPSNPFEMSDESLKDIKFPSHRRLDEHEDSSDQ
MHVQSRPGSRPIGVCAGTRPREPMEYNVSSMS
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgataaacttattttgccacctatctataacttcactccattaagggctctc
agggtggcttcacggtggaaactgtcgcgatttttagatcttgaaggagtacttgtcgtg
ttaaacaacgatggtattgattccgatgttgtgaatgactatagtggactggcggagctt
gtcgggtttaactaccaagatataatgaacatgaagcgacagaggagcccgactactgag
ttgctggatctgtggacaggccaaaatggaaacgtaggcgaactctggatgtatctctat
atgatggaacgttatgatgtgctaactgactgccgacggccaatagtgcatgactgttcc
gaatatgaaacatatcaacaactgaaactagacgcagagagacacaacactgaacaagat
ccgacagtcacaacatctgagatgagagtagatgagacaaaatttgccacattagaagac
gtgcgagactatttaatgtatgaggcacaacaacaacaaaaactggacacagagaggatc
aacgttgaacaagatccgacagttcaacggagaggaaaaagaacagcctatgatgctttc
atatgctacacagcagaggatgaaaatgatcgtaaattcctgtacaaaataattgaggaa
ctagaggttaaacgaggtcttaaactctttgtacccggaagggatgatctaccgggttct
gctgagtataccattacagcgtatctcatcgaaaaaaggtgtagacgtgtggtgattttg
atgtcaaggaagttcttgcagagtgaagcttgtgacttccaagtaaagtttgcacattcc
ctttttccagctgggagaagtaaaaaattgatacctgttatccgcgagaaaaacacacaa
atgccgagaatccttagtattctgggcgtatgcgacttcacgaaacctgatatggttgaa
tgggtctggaatcgactcttcgcgacaatcattgctccaactggacctacaacctatttc
gaggatggagatccatcaaatcctttcaatatcagtgatgaaagtctgagagatatcaaa
tatccctcccattgtcgtctagatgagcacgaggacagcttgaaccatttgaacgaacag
tcgagaaccagaaaaaggccgattgatgtatgtgctgattcccaaccgagagaaccaatg
gaatacgacgtgtcttcaatgtcctggggccaaccgacatccaacatgcagtcacaatct
ccatcatctgtaaaaagtagttcacttccaccggaaacgaaagggaagtcatcccagaag
ggagcaaccggaagtgtgaaacaatcaaaacctgttcttgcgaaaaagccagacaaattg
aaaaataaaaaacaagtatctagtcagcggcagcagctttctacgtacagcaagacgatt
tcctcttcagtatccacagaacatttcgtggctctaagaactacttcacggcggaagttg
tcgagttttttagatcttgaaggagtacttgtcgtggtagataatgacggtattgattcc
gatattgtgaatgactatagcggactggcggagcttgccgggtttaactaccaagatata
atggacatgaagcgacagaggagcccgaccactgagttgctggatctgtggacaggccaa
aatgggaacgttgattcgatatggttttctgaagttgtcgcgattttgttgttttacgtg
cattcaaatattgctgtcgtttgcgtcaattacattattagtgcagagattttcattacc
aatttttcttctattacatcgtttgataatgtattaatgtttgcaaattgctattttgtt
aaaaaagcaaacattttacattatgttattttcatttcagtgcaagattgtgtcaaatat
gaagaacaacagaaactgaaaccagggcctttagctcctgtgagagaaagcaaaacattc
tatgatgctttcatatgctacacagcaggggatgaaaatgatcgtcaattcctgtacaaa
atgattgatgaactagaggttaaacgaggtcttaaactgtttgtaccgggaagggatgat
ctaccgggttctgccgagtataccatcacagcgtatctcgtcgaaaaaaggtgtacacgt
gtggtgatattgacgtcaagaatgttcttgcagagtgcagcttgtgatttccaagtcaag
tttgctcatgccctttctccaggtgcgagaagtaagaagttgattcctgttatccacgag
aaaaacacacagttgccaagaatccttcggttcttgcccgtatgcgatttcacgaagtcc
gagatggttgaatgggtctggtatcgactcttcacggcaatcattgcaccagttggaccg
acaacctatttcgagcagggagatccatcaaatcctttcgaaatgagtgatgaaagtctg
aaagatatcaaatttccctcccatcgtcgtcttgatgagcacgaagacagctcagaccaa
atgcacgtacaatccaggcccggaagtaggccgatcggtgtatgtgctggtacccggccg
agagaacctatggaatacaacgtgtcgtcaatgtcctga
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