Mercenaria mercenaria (northern quahog): 123560138
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Entry
123560138 CDS
T07835
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer00061
Fatty acid biosynthesis
mmer00071
Fatty acid degradation
mmer01100
Metabolic pathways
mmer01212
Fatty acid metabolism
mmer04146
Peroxisome
Module
mmer_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
123560138
00071 Fatty acid degradation
123560138
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
123560138
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mmer01004
]
123560138
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmer04147
]
123560138
Enzymes [BR:
mmer01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
123560138
Lipid biosynthesis proteins [BR:
mmer01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
123560138
Exosome [BR:
mmer04147
]
Exosomal proteins
Exosomal proteins of breast milk
123560138
Exosomal proteins of breast cancer cells
123560138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-GeneID:
123560138
NCBI-ProteinID:
XP_053372543
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Position
10:78868148..78924783
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AA seq
687 aa
AA seq
DB search
MMENSLETWGPVCASVGVAVTGLAATYYLTKMPEPTCIPPVDLDNQSHILQDGSRTSKLV
PKDAKYKPLYEDVETFYDIFQRGIKTSGNGPFLGTRSGPNQEYVWLSYQEVYDQSVAFGS
WMLEQGIQSRSETVIGIFSQNRAEWVITEKACVAYSLVPVALYDTLGDDAVTFIINQTNM
SLIVCDVSEKVNKILKMVSEGENRCVKTIVVMNGIDGVDAELAWKVDVMIVPFQDALKTG
CSNLKPVAPPTPEDLALICYTSGTTGNPKGVMITYKQAMAQITGLSIAVFNYRLFNKNDV
HLSYLPLAHMYERIGQQCLTLEGARIGFFRGDVKLLLDDLQTLKPTVFFSVPRLLNRIYD
KVMAGVKGSKLKVMLFNWAIASKENELKQYVIRRNSIWDKIVFQKIQALFGGRVEYISTG
SAPLEAKVLTFFRCALGCMILEAYGQTESVAGLTMGVPGDYHAGAVGPPIPYNYIKLLDA
PEYGYFAKDNQGEVCAKGVTISSGYYKDPVKTSETFDKDGWLHTGDIGQWLPNGTLIIID
RKKNLFKLSQGEYVAPEKVELVYIRSSFVAQAFVEGDSLQPYVMSVIVPDEEVLMAWAKS
QKITGSFQDLCKSESVKTMILLDIQKIGREAGLKGFELTKDIVVRSELFSVENGLLTPTF
KNKRPQLRSFFKNDIAALYKKHQGSSS
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaattcattagaaacatggggacctgtttgtgcctcagtaggagtggcagtg
acggggttagcagccacatactacctaactaagatgccggaacctacatgtatacctcca
gttgacctggacaaccagtcacacattttacaggatggttcccgaaccagcaagctggtt
cccaaagatgccaagtataagccgctatatgaggacgtagaaacattttatgatattttt
caaagaggcatcaagacatctggaaatggtccgtttcttggaacacgttcaggtcccaat
caggagtatgtttggctctcgtaccaggaagtatatgaccagtctgtagcatttggttcc
tggatgttagagcagggaatacagagcagatctgagacagtcattggaatcttcagtcag
aatagagctgagtgggtaatcacagagaaggcatgtgtggcatacagcctagtaccagtg
gccttatatgacacgcttggtgacgatgctgttactttcatcattaatcaaaccaatatg
tctctgattgtgtgtgatgtgtcggaaaaagttaataaaatactaaaaatggtctccgaa
ggagagaacaggtgtgtaaaaacaatcgttgtaatgaatgggatagatggggttgatgcg
gagcttgcgtggaaagttgatgtcatgattgtgccattccaggacgcgctgaagactgga
tgctcaaacctaaaaccagtggctccaccgacacccgaggatttggctttgatatgttat
accagtggaactacaggcaacccgaaaggtgtaatgattacatacaaacaagcaatggct
cagattacaggactcagtatcgctgtatttaattatagactgtttaataaaaatgatgta
cacttgtcgtaccttccgctggcacacatgtatgagcgtataggacaacaatgtctaaca
ttggaaggggcgagaattgggtttttccgaggtgatgtgaaacttctgctggatgatctg
cagactttgaagccaacagtatttttctctgtgccgagacttctcaacagaatctatgat
aaggtcatggctggtgttaaaggcagcaagttaaaagttatgttgtttaactgggccata
gcttccaaggaaaatgaactgaaacaatatgtaataagacggaacagtatttgggacaag
attgtgttccagaagatccaggcgttgtttggtggtcgagtggagtatatttcaacgggg
tcagcaccacttgaagctaaagttctcaccttctttagatgtgctcttggatgcatgatc
ttagaagcgtacggtcagacggagtcggttgcaggtctcacaatgggagtaccaggggat
tatcatgcaggtgctgttggacctcctataccatacaattacatcaaattgttagatgct
ccggaatacggctattttgccaaagacaaccaaggagaggtctgtgccaaaggagtaaca
atttccagcgggtactacaaagatcctgtgaaaacttcagaaacatttgacaaagatggc
tggttgcacacaggcgacattgggcaatggttacctaatggaactcttatcatcattgac
agaaagaaaaatcttttcaagctgtcgcagggagagtatgttgccccagagaaagtggaa
cttgtgtacataagaagttcgtttgtagcacaggcgtttgttgagggagacagtcttcag
ccttatgtgatgtcagttattgtaccagatgaggaggtgttgatggcctgggcgaaatca
cagaagatcacaggcagtttccaggacctctgcaaaagtgaaagtgtgaagacgatgata
ttacttgacatacaaaagattggacgagaagccgggctcaagggatttgaattaaccaaa
gacattgttgtgcgatcagaattattttctgttgagaatggactgctaacaccgactttc
aaaaacaagcgaccacaactgcgaagtttcttcaagaacgacattgctgctttatacaag
aaacatcaaggaagttccagttag
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