Mercenaria mercenaria (northern quahog): 123560539
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Entry
123560539 CDS
T07835
Name
(RefSeq) myeloid differentiation primary response protein MyD88-like
KO
K04729
myeloid differentiation primary response protein MyD88
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
123560539
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Gene cluster
GFIT
Motif
Pfam:
TIR_2
Death
TIR
DUF4780
Motif
Other DBs
NCBI-GeneID:
123560539
NCBI-ProteinID:
XP_045208644
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All DBs
Position
10:4007732..4015847
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AA seq
462 aa
AA seq
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MDEDELVLPPIYNFTPLRALRVASRWKLSRFLDLEGVLVVVNNDGIASEVLNNYTGLAEL
AGFNYQDIMNMERQRSPTTELLDLWTGQNGTVGKLWMYLYMMDRYDVLSDCRRPIVLDCC
KYEEQQQLKADAEWYNIEQDPTVTTSEMRVNEEKYATKQDVESGKTTFYDAFICYTAEDE
NDRQFLYKMINELEVERGLKLFVPGRDDLPGSAEYTITAYLIEKRCTRVVILVSRKFLQS
AACDFQVKFAFALAPGARSKKLIPVIREKNTPLPRILRFLAVCDFTKSDMVEWVWDRLFT
AIIAPVGPTTYFEEEDPSNPFDMSDESLKDIKFPAHRRLDEHEDSSDHMHVQSRPGSRPI
GVCAGTRPREPMEYNVSSMPLGQPTSNMQPQFQSSVKRSSVPPETKGRSSQRGATGSVKQ
SKVAPAKRPDKFKNKKQVPCQRQQPSTDNKTISSSVSTEHFV
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatgaattggttttgccacctatttataacttcactccattaagggctctt
agggtagcttcacgatggaaactgtcgcgttttttagatcttgaaggagtacttgtcgtg
gtaaataatgacggtattgcttctgaagttctgaataactataccggactggcggagctt
gccgggtttaactaccaagatataatgaacatggaacgacagaggagcccaaccactgag
ttactggatctgtggacaggccaaaatgggaccgtagggaaactctggatgtatctctat
atgatggaccgttatgatgttctatctgactgccgacggccgattgttcttgactgttgc
aaatatgaagaacaacaacaattgaaggcagatgcagagtggtacaacattgaacaagat
ccgacagttacaacatctgagatgagagtaaatgaagaaaaatatgccacaaaacaggac
gttgagagtggaaagacaaccttctatgatgctttcatatgctacacagcagaggatgaa
aatgatcgccaattcctgtacaaaatgatcaatgaacttgaggttgaacgtggtcttaaa
ctatttgtaccgggaagggatgatctgccgggttctgctgagtacaccatcacagcgtat
ctcatcgaaaaaagatgtacacgagtggtgatattggtgtcaaggaagtttttgcagagt
gcagcttgtgacttccaagtcaaatttgcttttgcccttgctccaggtgcgagaagtaag
aagttgattcctgttatccgcgagaaaaacacaccgttgccgagaattcttcggttcttg
gccgtatgtgatttcaccaagtccgacatggttgaatgggtctgggatcgactcttcacg
gcaatcattgcaccagttggaccgacaacctatttcgaggaggaagatccatcaaatcct
ttcgatatgagtgatgaaagtctgaaagatatcaaatttcccgcccatcgtcgtcttgat
gagcacgaagacagctcagaccatatgcacgtacaatccaggcccggaagtaggccgatc
ggtgtatgtgctggtacccggccgagagaaccaatggaatacaacgtgtcgtcaatgccc
ttgggtcaaccgacatccaacatgcaaccacaatttcaatcatctgttaaacgtagttca
gttccaccggaaacgaaaggaaggtcatctcagaggggagcaaccggaagtgtgaaacaa
tcaaaagttgctcctgcgaaaaggccagacaaatttaaaaataaaaaacaagtaccttgt
cagcggcaacaaccttctacggacaacaagacaatttcctcttcagtatccacagaacat
ttcgtgtaa
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