Mercenaria mercenaria (northern quahog): 123560636
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Entry
123560636 CDS
T07835
Name
(RefSeq) HMG box transcription factor BBX-like isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123560636
Transcription factors [BR:
mmer03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123560636
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF2028
Motif
Other DBs
NCBI-GeneID:
123560636
NCBI-ProteinID:
XP_053409333
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Position
10:complement(73167056..73201498)
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AA seq
994 aa
AA seq
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MLPMSAMDGSGDGGDKRDVRRPMNAFLIFCKRHRSIVREKNPDLDNRSVTRILGDLWANL
KEEEKVVYTDLAKQYKDAFMKANPDYKWHNPEKTLGSQKSGLPLTKPTNAKVVRTEMNLL
PEGSIIPGKLADPNNMGGLSLLLMAGEQSGPVPVGIKPLSSATVPRSVEMSFATLPRSPE
LTSFPTCTLPNNMTPGNTSLNSGDRLAVFRDNKPLNLMEDKLENRQVVADNVLHLEDSKS
NWKLEEAAVKSVMQLKHSGVEKTWENFLPSKSGSLDILAKTGDTDAQPVKSVETFSSKPL
LYQAVAAPKMPQRSLLAEAFKDKFDIGGFPDILRDNLSSTKMANFENQGKLLEDQINMLE
QKLINKVDEKENFTKNFTNPIKSSDEIKQEPKDISEMEEESAMVTCGKLVVNHIIDKLYS
SDLGAGARRGNNNSDEVDGERKDDEKVNCEKTEQEIKTESCEERYDIVDDGHKNEVKVKV
KEKVVEAVDAVSKAGSYGFDVGEKVTKIEKGDTNDSEKSVDENSLDCKSLTKKSGKRQTA
PTADSTEYESEEIDEFQPVRKSRRRNRGQRYQELINEGIIQRSKERTAALQQTTPKEEST
EEDIHPIEPLNSYILPETAIRRIRKRTTSESAKDKMLHPDDVKRYKTGDFDLEAQIATLP
ACSVENMGRKRGFARQRHYSECTLTQRKMVDCETSPHSVPAFDIDKAVSLPPHIKLPSPE
TSKEPVTGSRKRKARKHSITHMIPAPPTLMKNGKVKTDGDSLGPCLIKPTVEMLKDETDY
SEKGPSVPITKTDYIENGFVAPANRSRSCSDVSEKFSDRSKCEVLKNRLLFNKNKNSLSE
SEVVGDKITTNAQETELSKCLNENKNKTGSVLCESREKSLIHKVVIQSDETLKNLSGAEM
NTSVPKTVLQDKQQCEISEVTDFNNTAEKLAENGNTVRMENQPDRENFVSKQSEQFVLGS
DSFHFEQSKVRKEKSVNDLLKTGKDVNSNTTMNS
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgctccctatgtcagcaatggacggcagtggtgatggaggagacaaacgtgatgtacgg
cgtccaatgaatgcttttcttatcttctgtaaacgtcaccgcagtatagtgcgagagaaa
aacccagatttagataatcgtagtgtcactcgtatccttggtgatttatgggccaatctg
aaggaagaagaaaaagtagtgtatacagatttggcaaaacagtacaaagatgcttttatg
aaagcgaacccagattacaaatggcacaacccagagaaaacgcttggctctcagaaatct
ggcttaccgctgaccaaacccaccaatgccaaggtggtaaggactgagatgaacctgtta
ccagaaggttccattataccgggcaaactggcagatcctaataacatgggtggattgagt
ttgctgcttatggcaggagagcagtctggccctgtacctgtaggtataaaaccattgtct
tctgcaacagtgcccaggtctgtagaaatgtcgtttgcaacattgccaaggtctccagaa
ctgacatcttttccaacttgcactttaccaaacaacatgactcctggaaatacaagtcta
aattctggagatagattagcggtgtttagagataataaaccactgaatttgatggaggat
aaactggaaaatcgtcaagttgtggctgataatgtgttgcatcttgaagatagcaagagt
aactggaagcttgaagaagcagctgtaaagtcggttatgcaattaaaacattcaggtgtt
gaaaagacatgggaaaacttcctgccatcaaaaagtggcagtttggatattcttgctaaa
actggtgatacagatgcgcagccagtgaaatctgtggaaacattttcatctaaaccatta
ctgtaccaagcagtagctgcccccaaaatgccacagagaagtttgcttgctgaggcgttc
aaggacaaattcgacattggaggttttccagatattttaagggataacttgtcaagtacg
aaaatggcaaattttgaaaatcagggcaaattgttggaggatcaaattaatatgttggaa
caaaaattaataaataaggttgatgaaaaagagaactttactaaaaattttacaaaccca
atcaaaagtagtgatgaaatcaagcaggaacctaaagacatttctgagatggaggaggag
tctgcaatggtgacttgtgggaagctggttgttaatcatataattgacaagttgtactca
tcagatttaggggctggagcaagaagaggaaacaacaattctgatgaagtggatggtgaa
agaaaagatgatgagaaagttaattgtgaaaagactgaacaggagattaaaactgaaagt
tgtgaagaaagatatgatattgttgatgatggtcataaaaatgaagttaaagtgaaggtc
aaagaaaaggtggtagaagctgtagatgcagtaagcaaggcaggtagttatggatttgat
gttggtgaaaaagtgacaaaaatagaaaaaggtgacacaaatgactcggagaaatctgtt
gatgaaaatagtttagattgtaaatctcttacaaaaaagtctggtaaaaggcagacggca
ccaactgcagattctacagagtatgagagtgaagaaattgacgagtttcagcctgtgaga
aagtctcgacggagaaataggggtcagcgataccaggagttaataaatgagggaatcatc
cagaggtccaaggagagaactgcagctttacagcagacaacacctaaagaagaaagcaca
gaggaagacatacatcctattgaaccgttgaattcctacattctgccagaaactgctata
cgtcgcattcggaaaagaacaacatcagagtcggcaaaagacaagatgcttcatccagat
gacgtaaaacgttataaaactggtgactttgaccttgaggcacagatagccaccttgcca
gcatgttctgtggaaaatatgggtcgaaaacgagggtttgctcgacagcgtcactacagt
gagtgtacccttacacagaggaaaatggtcgattgtgaaacatcacctcattcagtccca
gcatttgacattgacaaggctgtctccctgcctccccacattaagctgccatctcctgag
accagcaaggaaccagttactggaagtcgtaaacggaaagcccgtaaacacagcattaca
catatgatacctgcaccccctactctcatgaaaaatgggaaagttaaaacagatggtgac
agtttgggtccatgtctgatcaaaccaactgttgagatgttgaaagatgaaacagactat
agtgagaaaggaccttctgttcccattacaaaaacagactatattgagaatggatttgtg
gcaccagcaaatagatccaggagctgttctgatgtctcagagaagttttctgatcggtcc
aagtgtgaagtgttaaagaataggttgttattcaataaaaataagaacagtctttcagaa
agtgaggttgttggtgataaaataaccacaaatgcgcaagaaacagaactgagtaaatgt
ttaaatgaaaacaaaaacaagactggttcagtattgtgtgaatccagggagaagagtttg
attcataaagttgtaatacagtctgatgaaactttgaagaatctatctggtgctgaaatg
aatacaagtgttccaaaaacagttctgcaagataaacaacagtgtgaaataagtgaagtt
acagattttaacaacactgcagaaaaactggctgaaaatggaaacactgtgagaatggaa
aatcagccagaccgtgaaaattttgtttcgaaacaatcggagcagttcgttcttggttca
gattcctttcactttgaacagagtaaagtcagaaaagaaaaaagtgttaatgatctgttg
aagactggaaaagatgtaaacagtaacacaactatgaactcctaa
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