Mercenaria mercenaria (northern quahog): 123560816 Help Entry 123560816         CDS       T07835                                  Name (RefSeq) protein capicua homolog   KO K20225   capicua transcriptional repressor Organism mmer  Mercenaria mercenaria (northern quahog) Brite KEGG Orthology (KO) [BR:mmer00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:mmer03000]     123560816 Transcription factors [BR:mmer03000]  Eukaryotic type   beta-Scaffold factors with minor groove contacts    HMG SOX     123560816 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF4819 HMG_box HMG_box_2 Zf_WRKY19 DUF5763 Motif Other DBs NCBI-GeneID:  123560816 NCBI-ProteinID:  XP_053372844 LinkDB All DBs Position 10:36507779..36554397 Genome browser AA seq 2487 aa AA seqDB search MSTRSRRAQTGSTLAAPTTRPTVKTRRRGASSSVEDVEKESVAGRQEVPERAADTSGPSA AKRQKTEDIETTKQPTIKHGKLTRQDGTDTPEKDSDDPTPKSTPSSSRPASSLSLSATQS SSATPTPTPPLPTSIHRAMSLDSAEQVADTVLMKSPNDDDIMRNIAKPPKKRKAPDEIDT DTSSLFPPNKQPLIDLQQWINQRVLARRELIFQSGIIKNIFHNQRIGVQFEGDKDLTYFS VFDTKTCNIVGDNPPPAVMISVGCRVCVRTNQEQQVFYEGQVVEKKVQQPVLYRVRLIHG AHIAMFGQEVWMPRANIRLLQPPWHDDLEEGFPEQPTPPPITPTATQPTYQYQIIPQPMA HPHQPTHLTQPHTPMMPHQPPLPGQPSHHAHFMDHSQRYVEHSPSIAQSASFERESSDDE MRSEEVYFDSSGLSTPRSGSATPGSRCSHSLSDGKNRHPLKKRDMSRSRSAQSCESSRSS TPRSPTTNQKYKKGDVVSTPNGIRKKFNGKQWRRLCSKDGCTKESQRRGYCSRHLSSSGK VLRSAPAIPGMRKGDMKDGHIEWADAHSSRDTDYDPSSHGMDETEAANMLVSLGNSRSTT PAFSPTPSSVSSLSPRKRHPSSPQSGAGLRGMSAAFTPISPHPQNPNHSYMPSPTRSWSS GNSNKSGSSSSEHISPITPRFPQGGTNSAFQHPSMIDRARAPSLGLISKEHMKSNDSGID INTPKALKTVPSSPSPQSHFQNTQNLYASTLQQHLAAQSHQIRGGSLSSNIDGPQPVDVK PRASTQSLSDWQSGRTITIDAQLIPVAFMPQNGMKEAAPSSVGQEMGFPSHQQRAGEEIK QLTAATTLLPVMSEQIEQKREETVQEAETPKEPKQLRVYQWHSLVPYFTNTKPPANMEPA TMAVETKAAKKVVTLPPKRPVAIHQSISDNIPKDDDDDLPDADYDDDDVFDTKDEQPETA KKIVSAKRRSQSLSALKDKDERSPRKGKDKDHIRRPMNAFMIFSKRHRPLVHQKHPNQDN RTVSKILGEWWYALGAKEKQKYHELAHQAHFKAHPEWKWCSRDRKRSSTIAATLKQRSNS QRLGSTDLADDEGVDPGVAFDDDAFEPEPEPKSGLSLFELQRGRSQSLSAFPPREDESQG FQSYNKQEEAQDRRNAESRFSGNSVSQGMVAMTTSQQRKDGDNDSSDEEKMVICETERAQ DIADKEKGSDADGIDLNCREHVSDSETDSTPEDDIIENKAFPQQRFSPVMKHINSSDITY RPKPIKRIPDSGKPGPNSPVGVSPGHQSFADRQIPRPSSNGSNFQPTGAVFKAKGKQSRY LSTGSVQDLRSSLFDHMPSNLRGESVSSTRGIHQQQMKIHNITMATGSEQKIIMSSNMET TLGNQNGRGGPIIGKFSQRGPIKQQQPQRQMTPVSTTPSILQQTLQTGAQNSRPVTTTSI HIVPSPQQAMLNQQYAIKNTVIPTFTTMGKPISASVPSVSLQQNPVNGTFNASIAAANVQ PQTILPNASSAGLKNMGGTIVLQGIPATQYGMIIGSQAMASPTVTKPPTLSVAGSTQYIG NSLQNYVPSLSAAQNQGQATPTQTMAPPTVLTNFIIKPGQGGQTIQPALNSPSPGQPVTP NFNQHVQPTHVQYILPSIRMQAPQPGGKVQNHVIQMALPGTHLPQGSIQLTFAGNQNNAQ AQSMQQVQQVKVSPQQVQAGKIQITPGFKVVPSPVKQHPSPAASPQLNTAPQTIQVISQN VGNKQQTVTQYVAVTQSPGVLASPQQVQIQSAQVNQPVVSRQQQNHQQLQNSLQQQLQTI QPLQALNTQQPLIQQALQQPVQQPTLQQALQAPVQYQQTQVQVNQQQQQQQQQQQQRVIL PSTQKLAFVQPANSIAASSVASPGVKVVSSAASPAYIQYVGSVQGQQGTVQQVLIQPQNV QRPPSAGNVSMASSQPCTQPTIAPKPTPVLSKTGTPPESQSPMFYQGVMNLKNQSYVTMA SEMKGEIGYITSSNLQPKPQKVKATIANIPVGTESLQKFNTLPAQKQYGSASTPKGFPMS PNLSSALASPSGILSPSRSSPSQSVRDQVLDHRPQRPSPLVLSPSPVNKPAESSEGQKGQ EVQNQEVPEVDANGKPQRPGKGKRYKDFIAENGIKPFKKDRKVYSSKSGNQEASMSDDRN QQVSHDQPSTSAVTQITVTGPEESESQSSSIQMLSPPPSAGEKVKRKPPPLPSPSTLNVP SPMPSPGLSSPRKTIFKKNIDDGMDKVLERVNFGQRFEQLPQFNPETSEVGTPLPQSPRG IIVSYKKRRKMSSLAKPDNNDSSDHTSDTPQTPHTPSLPHTPLASLPHTPKTPRSARFDD GQFFGKDFSLDTLADAAISRPSLDPFAEGDIHSPMTPKTPSSPGQFSSLRRILDQRRNLV MQLFEENGLFPSAQATATFQARYQDIFPTKTCLQLKIREVRQKMMAQSAAHEAATLGGTG EAGDNSSHSTGDSESQSGNQEESADQS NT seq 7464 nt NT seq  +upstreamnt  +downstreamnt atgagtacaaggtctcggagggcacagacaggaagtaccctggccgcacctaccacaagg ccaacagtgaagacaaggcgacgtggggcctcatcgtctgtagaggatgttgagaaggag agtgttgccgggagacaggaagttccagagagagcagcagacacctctggaccgtctgca gcaaaacggcagaaaactgaggacatagaaactacaaaacagcccacaattaaacatggt aaactcactagacaagatggtacagatactcctgagaaagacagtgatgatcctacacca aagtctactccatccagcagtcggccagcatccagtctgagcttaagtgcgacacagtca agttcggcgaccccgacacctacaccccctttgccaacaagcatacacagagcaatgtca ttagacagtgctgagcaagtggccgacaccgtgctaatgaaatcgccaaatgacgatgat ataatgagaaatatcgcgaaaccacctaaaaaacggaaagcacctgacgaaattgataca gatacatcaagtttgtttccgccaaacaaacagccacttattgaccttcagcagtggata aatcagcgtgtgcttgcgagaagagaactgatatttcagtcaggaattataaagaatata tttcataaccaacgtattggtgttcagttcgaaggggataaagacttaacatatttttct gtatttgacacaaaaacttgtaacattgttggagataaccctccgcctgcagtaatgatc tcagttggttgtcgcgtttgtgttcgtacaaatcaagaacaacaagttttctacgagggt caagtcgtagagaagaaagttcagcagccagtactatatagagtgcgcttgattcatggt gcacatatagccatgtttgggcaagaggtatggatgcctcgtgcaaatataagacttctg cagccgccatggcatgatgatcttgaggagggctttccagaacaaccgactcccccacca atcaccccgacggctacccaacctacatatcagtatcagataattccacagccaatggcc caccctcaccagccaacacaccttacccaaccccatactcccatgatgcctcatcaacca ccgttacctgggcaaccatcccatcatgcccacttcatggaccactcacaaagatatgtt gaacattccccgtctattgcccaaagtgccagttttgaaagagaatcttctgacgatgag atgagaagtgaggaagtgtattttgattcatcaggtctaagtactccaaggtcgggcagt gcaacaccggggtcaaggtgcagtcacagtctgagtgatgggaagaataggcatccactc aaaaaacgtgacatgtcaagaagtagaagtgctcagtcgtgcgagagcagtcggtctagt acaccccgctctcctacgaccaaccagaaatacaaaaaaggtgatgttgtttcaactcca aacggaatacggaaaaaattcaatggtaaacaatggagaagattgtgttcaaaagatggt tgtacaaaagaatctcagcgtagaggatactgctccagacatctgtcttcatctggaaaa gttcttagatctgcaccagcaattccaggaatgagaaaaggtgatatgaaggatggacat attgaatgggcagacgcacacagttcccgcgatactgactatgacccaagtagtcatgga atggacgaaactgaagcagcaaacatgttggtgtctttaggaaactcaaggtcaacaaca ccagcattttccccaacgccttcatcagtgagcagtctgtcgccacggaaacggcatcct tcatcacctcagagtggagcaggacttagagggatgtcggcagcattcaccccaatttca cctcacccacagaatcctaatcacagttacatgccttcgcctacacgcagctggagttcg ggaaactcaaacaaatcagggagctcctcatctgagcatatttcacctatcacaccaaga tttccacaagggggtacaaactcagctttccagcatccatctatgatagatcgggctcgt gctccgagtcttgggcttatcagcaaagagcacatgaaaagtaatgactccggaattgat atcaataccccgaaagctctcaagacagtgccatcgtcaccttccccacaaagtcatttt cagaatacacagaatctgtatgcatctacgctgcagcaacacctggctgcacagtcacat caaataagagggggcagtctttcatcaaatattgatggtccgcagccagtggacgtcaag ccccgtgccagtacacaaagtctgtcagactggcagtcaggaagaactatcacaattgat gcacagttgataccagttgcttttatgcctcaaaatggaatgaaggaagcagcgccatct agtgttggacaagaaatggggtttccctctcaccaacagagagctggcgaagaaataaaa cagctgactgcagcaacaacactgttacctgtgatgtcagagcaaattgaacagaaacga gaagagaccgttcaagaagctgaaactccaaaagagccgaagcagcttcgagtttatcag tggcattctctggttccctattttacaaacacaaagccaccagcaaacatggaaccagcc actatggcagtggaaacaaaagcagccaagaaggttgtgaccctaccccctaaacgccca gttgcaatacaccagagtatctccgacaacattccaaaagatgatgatgatgacttgccg gatgcagattatgatgatgatgatgtttttgatacaaaagatgaacagccagaaacagcc aagaaaatagtttcggcaaaacgtagatctcagtcactaagtgctctcaaagacaaagat gaaagaagtcctagaaagggaaaagacaaggaccatatccgcagaccaatgaatgccttc atgatattcagcaagcgtcatagaccactggtgcaccagaaacatccgaaccaggataac cggacagtttcaaagattcttggggagtggtggtatgcccttggggccaaagagaaacag aagtaccatgaattggctcaccaggcacactttaaggctcatccagagtggaagtggtgt tctagagatagaaaaaggtcaagtacaatagcagctactttgaagcaacgatccaatagc cagagacttggctccacagatttagcagacgatgaaggtgtagatcctggtgtggcattt gatgatgatgcttttgaaccagaacctgagccaaaatcgggattaagtctgtttgagctg cagcgtggacgttcacaaagtctgtcggccttcccgccacgtgaagatgagagccaaggt tttcagtcgtataataaacaggaagaagctcaggataggcgcaatgccgagagcaggttc tccggcaatagtgtctcccaaggaatggttgccatgacaacaagccagcagagaaaagat ggtgacaatgacagtagtgatgaagaaaaaatggttatttgtgaaacagaaagagctcaa gatattgcagacaaagagaagggatcagatgcagacggcattgacctaaattgtcgggaa catgttagtgacagtgaaacagacagtacgccagaagatgacattatcgagaacaaggca tttccacagcaacgattttcaccagtaatgaaacacatcaattcatctgacataacatat cgtccaaaaccaataaaacgtatcccagattcgggaaaacctggtccaaacagcccagtt ggtgtttcaccgggtcatcaaagttttgccgataggcagataccaaggccttctagcaac ggttcaaacttccagccgactggggcagtttttaaagcgaaggggaaacagtctcgctac ttgtcaactggaagtgtgcaagatctgagatcaagtttatttgatcacatgccaagtaat ctccgtggggaaagtgtatcctcaacaagaggaatacatcagcagcagatgaaaatccac aatatcaccatggcaacaggaagtgaacaaaaaattataatgagttcaaatatggaaact actctgggtaatcaaaatggccgaggtggtccaattattgggaaattttctcaacgtggc ccaatcaaacagcaacagcctcaaagacagatgacgccagtatcgactactccgtcaata ctgcagcagacgttacagactggtgcgcagaacagtcggccagtcactacaacatctata catattgttccttcaccacaacaggcaatgctgaatcagcaatatgccatcaagaatact gtaataccgacatttacaacaatggggaaaccaatttcagcttctgtcccctcagtttca ttacagcaaaatccagttaacgggacttttaacgcttcgatagcagccgctaatgtacag ccccagacaattctgccaaatgcctcttcagctggtctgaagaatatgggcggaactata gttcttcaaggaatacctgccactcagtatggcatgattattggatcacaagctatggca tcgccaacggttaccaaaccaccaacactgtcagtagcaggttctacacagtacatcggt aactcactacagaactatgtgccttctctgtcagcagcacaaaaccaaggtcaggccaca cctacacagacaatggcaccacccactgtcctaactaactttatcatcaaaccaggtcaa gggggtcaaacaatccagccagctctgaattcaccatcaccgggacaaccagttacacca aattttaaccagcatgtccagcctacacatgtacagtatattctaccctctattcggatg caggcacctcagcctggtggtaaagtccagaatcatgtcatccagatggcattgcctggt acccacctaccacagggcagtattcagctgacgtttgctgggaaccagaacaatgcacag gctcagtccatgcagcaagtgcaacaggttaaagtgtcaccacagcaggtccaggccgga aaaatccagattacgcctggattcaaggtcgttcctagtccagtgaaacaacatccgtcg ccggcagcctcaccccagttgaacactgcacctcagacaatacaggtgatcagtcagaat gttggaaacaaacagcagactgtgacacagtacgtagctgttactcagtctccaggggtc ctggcttcacctcaacaggtacagatccagtctgcacaagtcaatcaacctgtcgtatct aggcaacaacagaatcatcaacagttacagaattcgttacagcaacaactacagacaatt cagccacttcaggcactaaatacacagcaacccctgatacaacaagcattgcagcagccg gtccagcagccaaccttgcagcaagctttgcaggctccggttcagtaccagcagacccag gtacaagtcaaccagcaacagcagcagcaacaacaacaacaacaacagcgggtgatactc ccatcaacacagaagttagcatttgtgcaacctgccaacagtatagctgcatcatcagtg gcatccccaggggtgaaggttgtatcgtcagcagcgtcaccagcatatatacagtatgtg ggatcggtacaaggacaacaagggactgtacagcaggttctgattcagccccagaatgtt cagagaccgccctcagctggtaatgtttcaatggcatcgtcacaaccctgtacacaacca acaatagcgcctaaacctaccccagtgctaagtaaaacgggaactccaccggaaagccag agtccaatgttttaccaaggtgttatgaacctaaagaatcaaagttacgtaacaatggca tcagaaatgaagggggagattggttacataacgagttcaaatcttcagcccaaaccgcag aaggtgaaggctactattgcaaacataccagtaggcacagagagcctccagaaattcaac acacttcctgctcaaaaacagtatggtagtgcttcaacacccaaaggtttccctatgtca ccaaacttgtcgtctgctcttgcatccccatcggggatcttgtctccttcgaggtcctcc ccatcccagtctgtgagagatcaagtgttggatcacagacctcaaaggccgtcccctctg gtgctgtctccttcaccagtgaataagccagcggagagttcagaaggtcaaaaaggtcaa gaggtacaaaatcaagaggtcccagaagtggatgctaatggaaaacctcagaggccgggg aaagggaagagatataaagatttcatagcagaaaatggcataaaaccatttaaaaaggat agaaaggtctacagtagcaaatctggtaaccaggaagcttccatgtctgatgacaggaac cagcaggtgtcacatgaccagccttcaacctctgcagtgacccagatcacagtgactggt cctgaagaatccgagtcacagagcagctcaatacaaatgctgtcaccaccgccatctgct ggcgagaaagtcaaacgtaagccaccacctttaccaagcccatcaacactgaatgtcccg tcgcccatgccttctcctgggctcagtagcccaagaaaaacaatcttcaaaaagaatatc gatgatggaatggacaaggtattggagcgtgtgaactttggccagcggtttgagcagctg ccacagtttaaccccgaaacatctgaagttggtaccccgctaccacagagtccaagggga attattgtcagctacaaaaagcgccgaaaaatgtcttctttagccaagccagacaataat gacagttcagatcatacatcagacaccccgcagacgccccacaccccgtcactaccccat acaccactggcttcactccctcatacacccaagactccaagaagtgctcgatttgatgat ggtcagttcttcggcaaagactttagcttggatactctggcagatgctgccatatcaaga ccaagtttagatccatttgctgaaggagacatacattctcccatgacaccaaaaacaccg agctcccctgggcaattttcatctttacgtagaatcttggaccaaagacggaaccttgtc atgcagctgtttgaagaaaatggccttttcccttcagctcaagcaacagcaacgttccaa gccaggtaccaggacatttttccaacaaagacatgtctgcaactgaaaatacgggaagtc aggcagaagatgatggcccagtctgctgcacatgaagcagctacactaggtggcactgga gaagcgggagataactcttcacactctactggtgattcagagtcccagtctggtaaccag gaggaatcagcagaccagtcttga

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