Mercenaria mercenaria (northern quahog): 123561017
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Entry
123561017 CDS
T07835
Name
(RefSeq) retinoic acid receptor RXR-alpha-B-like
KO
K08526
retinoid X receptor gamma
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123561017
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mmer03310
]
123561017
Transcription factors [BR:
mmer03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
123561017
Nuclear receptors [BR:
mmer03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
123561017
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
123561017
NCBI-ProteinID:
XP_053408280
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Position
10:complement(14966519..15011031)
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AA seq
420 aa
AA seq
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METVDLKSDPDTSLQYTNSDDSEPDGYHETVVQTDISSPPVTPNVVQGSYKGVKFFIDSQ
TNEVVAGDSTTVGVTSEVADEGQGHFQACMICGDRGSGYHYSVLSCEGCKGFFKRTVQKN
LFYVCKANGMCLINKMTRNNCQFCRFNKCLQFGMKREAVREDRSPGGKHRTKKPRFDNSM
EDENAAKSNENKQKLEEEHNEIINILLASAPDKVPDNEFEGRSANEISIEELMQFGYSEL
KYIIEWAKKVPNFRLFTMEDQMALLKSAFMELNVVRLSYRSMEYDDALRFADNIVVPRAV
CATMGWGQELVHATLEFATRLKELDLDRVEFALMNAIVLTYPDAIGLSDKSKVITVQTKF
LDTLRRYVCVKYNNDKGRFGKLLLRLPTLRTLSAKAAERFLSLTLEGVLPLNDLVQEMMC
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggagacagttgatctaaaatcagacccagacacaagtttacagtacacaaactcggac
gactccgagcctgatggctatcatgaaacagttgtacagacagacataagttctccgcct
gtcacaccaaatgtagtgcaaggatcatacaaaggggtaaaatttttcatcgattctcag
acaaatgaagttgttgcaggagattctacgactgttggcgttaccagtgaggtcgcagat
gaaggtcagggtcatttccaggcatgcatgatctgtggggaccgtgggtctggttaccac
tactctgtcttgtcatgtgaaggctgtaaaggattcttcaaaaggactgtccagaaaaac
ttgttttatgtttgtaaagcaaatgggatgtgcttgattaacaagatgacgaggaataac
tgtcagttctgtcggttcaacaagtgtctacaattcgggatgaaaagagaagctgtaaga
gaagacaggtcacctggaggcaaacatcgtacaaagaagcctcgctttgacaattccatg
gaagatgaaaatgcggcgaagagcaatgaaaataaacagaaacttgaagaggaacacaat
gaaattatcaatattttactggcatctgctccagataaagtcccagataatgaatttgag
ggaaggtcagccaatgagatttctattgaagaactgatgcagtttggatactcagagctg
aagtatatcatagagtgggctaagaaagttccaaatttccgactgtttacaatggaagat
cagatggcattactgaagtcagcattcatggagctgaatgtagttagactatcatacagg
tcaatggaatatgacgatgcattaagatttgcagataatattgtggtgcctagagcagtg
tgtgcaacaatgggctggggtcaggagcttgtacatgcaacactggagtttgctaccaga
ctgaaggaacttgaccttgatagagtggaatttgctttgatgaatgccattgttcttaca
tatcctgatgctattggtctcagcgacaagagtaaagtgatcaccgttcagacaaagttt
cttgacactctgcgacgttacgtctgtgtcaagtacaacaatgataagggtagatttggt
aaactcctgcttcgtctgccaacgttacgaactcttagtgcaaaggccgctgaaagattt
ctgtcgttaacgctcgagggtgttttacccttgaatgatcttgtgcaagaaatgatgtgc
tga
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