Mercenaria mercenaria (northern quahog): 123561166
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Entry
123561166 CDS
T07835
Name
(RefSeq) patched domain-containing protein 1-like
KO
K24682
patched domain-containing protein
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mmer04990
]
123561166
Domain-containing proteins not elsewhere classified [BR:
mmer04990
]
Other domain-containing proteins
Patched domain-containing proteins
123561166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
123561166
NCBI-ProteinID:
XP_045209327
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All DBs
Position
10:80291812..80296755
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AA seq
931 aa
AA seq
DB search
MSRSAEKEARKRAKKEKKRQLKQQRVNFQEAFKHFFEVLAICIAKHPWKVAIITFLFNGL
LGLGMLNLPASKLLNNDIEDLYIPKGGPTEKTANELLKLFPDKSGYDFYPHQNVKQPMFA
EIMIWKHDVQNLINGSIYQEIEHIMKFVKNISTFTVDGGYAKYPDLCARRNGECVIQGEE
VVEQIKDNDAGTIPIRELLNRDGNNYESSLTNLADYTVENDTLTSAKYLKVRFHLRQDSE
TMLKNSKLWRDHFVTYMKKFIRKQYPDNLHLTFTHSGAFYEELGNDTFMDIPYFSFVFTV
FLTYLGIIMAGGNIISKRVNIGRIGIVVTPVSVLGAWGLLMGCGVEFTNTIGVIPLLIQA
HQIINAMIALSHLSDVNDVKDAHKRVAYAVKTSAIPVTLTTLCHVIPFAVGIPSNYYVTK
LVCIYFVVTMLFNYFNHFVFFTACLALHEHRIDAELHFCCWTKLTPRDQLIEEGRNCCVI
CCCSGKRPETREDTESGPERLSRKLMSRFFLTTPMKFFSVLSYLAYLVFVIWGLTMYDID
SVQISKVLPKSYFSNWNKYWTREFKNESIIQFVAIHPYGYTHNQTIVSDFEKLIKTKSYM
KFDSFQSWFETYSSSDYKNLTTEEAFLQSVQESFIPNNPVFKHDLVSDAIRPRVIASRFY
MKTKHVSSTKAMIQIKKDLQKLVKDINEYAEDIHDNNEDNGVYESPFIWQVDDDKYFIVH
SPDFLATDWYMLPLWEILKIAAVQFGLLFCLSLILNPSLGMAIQLPFCYFSMVGGIFGLS
HFFGVYLTPVPMIVYMIGCSYSTEVISHTYYHFMKAEGINRAARMNTVLSTISQAIFHTI
FGQFLGLLVLIVDESYVFVTVFQLTIITTGSCVIHTVLWLPTLLSLLGPGEEKIPEESLD
IYKVELATISNGTASRNNSAGIANRSFVRDS
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggtctgcagagaaggaagcgcgtaaaagagcaaagaaggaaaagaaaaggcaa
cttaaacaacaaagagtaaatttccaggaggcctttaaacatttcttcgaggttttggca
atatgtatagctaagcatccatggaaagtggctattataactttccttttcaacggttta
cttgggctaggaatgttaaatttaccagctagcaaattactcaataacgacattgaggac
ctatatataccaaagggtgggcccacggagaaaacagcgaatgaacttttaaaactattt
ccagataagagcggttatgatttttatccccaccagaatgttaaacagccgatgtttgca
gagattatgatttggaaacatgatgtccaaaatctcattaacgggtctatataccaggaa
atagaacatattatgaaatttgtcaagaatatctccacgtttaccgttgatggcggctac
gcaaagtacccggatctttgcgcgcgcagaaatggcgaatgtgttatacaaggtgaagaa
gtagtagaacaaataaaagacaatgatgctggaactataccaattagagagctgctcaac
agggatgggaataattatgaaagttcacttactaatttagcagattatacagtcgaaaac
gatacgctgacgagcgctaaatatctaaaagttcgattccatctccggcaagactctgaa
acaatgttgaaaaattcaaaactttggagggaccattttgttacttatatgaagaagttc
attagaaaacagtatccggacaacctccatttgacctttacacactcaggggcattttat
gaagaattggggaatgacactttcatggatattccgtatttctcgtttgtgttcactgtg
ttcctgacctatctcggtattattatggctggaggaaacatcatctctaaacgagttaat
attggaaggatcggcattgtggtcacacctgtaagcgttcttggagcctggggcctcctc
atgggctgtggggttgagttcaccaatacaatcggcgtgattcctcttcttatccaggct
catcaaataatcaacgctatgattgcattgtctcacctgtcagacgttaatgacgtcaaa
gatgcacataagcgcgttgcctatgctgtaaagacatctgctatccccgtgaccttgaca
actctgtgtcacgtgatccctttcgccgttggaatcccttcaaattactacgtcacgaaa
cttgtctgcatttattttgttgtgacgatgctgttcaactatttcaaccactttgtgttt
ttcacggcatgccttgctttacatgaacaccgtatagacgcggaacttcacttctgctgt
tggactaaactgacaccacgtgaccagttaattgaggaaggaagaaactgctgcgtcata
tgttgctgctctggaaaacgaccggaaaccagagaagacactgaaagcggtccggaacga
ttatcgcgaaaactaatgtcaagatttttcttgacaactccgatgaaatttttcagcgtg
ctatcgtacttagcatatctggtatttgtgatatggggtctaacaatgtatgatatagac
tccgtccaaatcagtaaggttctgccaaaatcttacttctctaactggaacaagtactgg
acaagagagtttaaaaatgaatctataattcagtttgttgctattcatccctatggttac
acacacaatcaaaccattgtctcagactttgaaaagctgattaaaacaaaatcctatatg
aaattcgattcttttcagagttggtttgaaacttattcttccagcgactataaaaatctc
accacagaggaggcattcttgcaatctgttcaagaaagcttcattccaaacaaccccgtg
tttaaacacgatcttgtaagtgatgcaattcgtcctcgagtaattgcttctagattctac
atgaagacaaaacatgtatcgtcaacaaaagcaatgattcaaattaagaaagaccttcaa
aaactggttaaagacataaatgagtatgcggaagatatacatgataataacgaagataat
ggcgtatacgagtccccgttcatatggcaagttgacgatgataaatatttcattgttcat
tcgccggatttcctcgctacagactggtatatgcttccactttgggaaattcttaagatt
gccgcagttcagtttggtcttttattctgtctatctctcattcttaaccctagcctcggt
atggccatccaacttccgttctgctacttctcaatggttgggggaatttttggactttct
cacttttttggtgtctacctcacccctgttcctatgattgtttacatgattggctgttct
tacagtactgaggtcatttcccatacgtactatcacttcatgaaagctgaggggatcaac
cgagcagcgcgcatgaatacagtcctaagtactatttctcaggcgatcttccacacaata
tttggacagttcttaggtctgcttgttcttatcgttgatgagtcctatgtttttgtcacc
gtgtttcagctgacaatcatcaccacaggttcctgtgttattcacacagttctatggtta
ccaacccttctgtctttgctaggcccaggtgaggagaaaatacccgaagagtctcttgac
atctacaaagttgaattagcaactatatcaaatggcactgctagcagaaataattcagct
ggtattgcaaatcgttcatttgtcagggatagttaa
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