Mercenaria mercenaria (northern quahog): 123561185
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Entry
123561185 CDS
T07835
Name
(RefSeq) contactin-like
KO
K06761
contactin 3/4/5/6
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mmer04515
]
123561185
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mmer00537
]
123561185
Cell adhesion molecules [BR:
mmer04515
]
Immunoglobulin superfamily
Contactins
123561185
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mmer00537
]
Others
123561185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Lectin_C
Ig_J_second
UL45
FANCA_interact
Motif
Other DBs
NCBI-GeneID:
123561185
NCBI-ProteinID:
XP_045209360
LinkDB
All DBs
Position
10:79409777..79447158
Genome browser
AA seq
1235 aa
AA seq
DB search
MWTLWLLFSWIVISVEGQSQTCPVTWQTYQQTCYLFYMAEPLDYIGAVEHCHSYGSSVVS
VNSQGEHNFIIQQLRIYNAAGYEWYTSGTSGVASNHVEWDGDGSIAVEEWWFSEEDRLLT
YPRIVYKTDSVVYGWSRVPSVTKLPFVCEISQIEAYRISQDDRDFTYGTNFTDINLAPRG
PRFIIQPENLVVVEEDSRSDTDGESFTISLACMAEGNPMPTYSIRHTYGNGTVVDITTDM
DTRYTLIGGRLVIEDPTETKDAGIYQCLASNIFGTIYSEVANITFGVLEHFSNVQRAPVV
AMEYQSAAIECSPPPYKPAVSYQWYRGQIADFVRPDLNPYIFISSNGKLYFSEVTKNDEA
DYRCIVKLTSGSDAMSTYQPPSRISLPIPLQINHQVPATWGPEIADGFIASFPNKPLRGN
TVKLECLAYGTLPFTYSWSRKDYPLPSKTTLSDHNRILEIVDVQIEDAGTYYCTVVRDTG
ARVQAVHNLVIETRPYFRFPLPDQHADINSQLTWRCEANTIPLGVYIWYKNGELLHSVPG
DIEIKRNVITIQSLDPMRHDGMYQCVCLNTHGYSFSSAQLRVLAFKPSFAKRPRKTSQTA
AIGGHVTLDCSPEAAPSPEYTWNRNGANVNPPPDDGVSRVRLLADGSLYIGQVDASDAGT
YCCIATNSYGSDSSCGELKVVSNTVITLPPQNTIGRINVTSVLLCDASFPGNVDNIFIWR
FNGRELNLNNNAHLTLGTTQYPGALYVRSARYEHTGIYTCVAKTTYDSVNVSASFTVEGP
PGPPAGVRLDRNTITSTSAVVIWTEGETHGRPTEFHNIEACTEYNTTWVPIYTYIPYTVS
QITGTQKHTVNVEDLKSGNGYFFRVRAVNALGVGEASRSSAVYRIPGAAPSKYPDDIGGG
GGTVGILTITWTPLPPEDQGGSGIGYVVYWRLANTTTKFMEATVTENVGQFATTVGSEYF
YMLYEVKVSAFNEFGPGPVSPGGVYIYSAEEMPIGVARNVYAWPYNSTALEVSWDVIPND
REHMRGKLLGYQVNYQLRFVEGASLDAISWRGETSSGIVIGLDTYTWYTVDVQLLTNAGM
GPRGEVYHAHTHKQAPILYPTEIHIYSHTAESVRIEWRGVSTTSVEENLEGYKVRYWPTT
DDVRSAKDVVTDRIETEAVIYGIQKDIVYECRVLGFSRGGDGKHSSSVYFTLGGLVAFDP
SSSEILASANSFHPSYVTCILSLVFVSFINTCTFF
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgttatggcttttgttctcttggatagttatttctgtggaaggacaatcacaa
acatgcccggtcacgtggcaaacctaccagcaaacatgctacctgttctatatggcggag
ccacttgattatataggggccgtggaacattgccattcgtatggttcctcagtagtgtct
gtaaatagccagggtgaacacaattttataatacaacagctgagaatttacaacgccgct
gggtacgaatggtacacgagtggtacatccggtgttgccagtaaccacgtggagtgggat
ggagatggttcaatagctgtggaggaatggtggtttagtgaagaggacagacttctaaca
tatccaagaatcgtatataaaacagatagtgttgtttatggttggagtagagtgccgtca
gttacaaagcttccatttgtctgtgaaatatctcagatcgaggcttacaggatttctcaa
gatgacagagacttcacttatggtacaaattttaccgatattaaccttgcacctagagga
ccgagatttattatccaaccagaaaacttggttgtcgttgaggaggattccaggtctgat
acagatggtgaaagttttacaatatcccttgcttgtatggcggagggcaatcctatgcct
acttacagtatcagacatacatacggcaacggaactgttgtcgatatcacaacagacatg
gacacaagatacaccctcatcggtggtcggctggtaatcgaggatcctacagaaactaaa
gacgctgggatatatcagtgtttggcatcaaatatattcggaacaatatacagtgaagtg
gcaaatatcacatttggagtactcgagcatttcagtaacgtacagcgggcacctgttgtt
gccatggagtatcaaagtgcagctattgaatgctctccgccaccttataagcccgcggta
tcgtaccagtggtatcgcggacagattgctgatttcgtacgcccagatctcaatccatac
atcttcatctccagtaacggaaaactttatttctccgaggtcaccaagaacgacgaggcg
gactaccggtgtattgtaaagctcacttccggttcggatgccatgagtacatatcagcct
ccaagccggataagtcttccaataccactacagattaatcaccaagttccggcgacttgg
ggtcctgaaattgccgacggatttatagcctcgtttccaaataaaccgttacgcggaaac
accgtgaagctggaatgtcttgcatatggcacgcttccatttacatactcgtggtcaagg
aaagactatccactaccttccaaaacgaccctcagtgaccataatagaatattagaaata
gtcgatgtccagatcgaggatgcggggacatattactgcacggttgtgagagacactggg
gctcgtgttcaagcagttcataaccttgttattgaaacgcgaccttacttccggttccct
ctgcctgaccagcacgcagatataaatagtcaactgacctggagatgtgaggccaatact
ataccattgggtgtttatatttggtataaaaatggtgaacttttacactcagtacctgga
gatatagaaataaaaagaaatgttattacaatacagagtttagatccaatgcgtcatgac
ggaatgtaccagtgcgtttgtctgaatacccatggttactcatttagttcagcacagcta
cgtgttctagcattcaaaccatcttttgccaaacgaccgcggaaaacaagccagacagca
gctattggtggtcacgtgacactggactgttcaccggaagctgctccttccccggaatac
acgtggaacagaaatggcgccaatgttaaccctcctcctgatgacggtgtttcacgtgtc
agacttctagcagacggcagtctatatataggtcaggtggatgccagtgatgccggaaca
tattgctgcatagcaacaaatagttacggctcggattccagctgtggcgagcttaaagta
gtttcaaacaccgtcatcacgctgccaccgcagaacactattggtaggataaacgtgacg
tcagttctgctctgcgacgcatcatttcctggaaatgttgacaacatattcatatggcgt
ttcaacggacgtgaactcaacctaaataacaacgcacatttaacacttggaacaacacaa
tatccaggtgctttatatgtgagatcggctcgctacgaacacactggcatctacacgtgc
gttgctaagacaacgtatgattctgtgaatgtatcagcctcattcactgttgaaggaccg
cctgggcctccagctggtgttagactggacaggaacacaataacgtcaacatctgctgtg
gtaatctggacagagggcgagacccacgggcgcccgacagagttccataacattgaagca
tgcactgagtataacacaacttgggtgcctatctatacatatataccttatacagtatca
cagattactggaacacagaagcacactgtaaatgttgaagatttaaaatccggtaatggt
tatttcttcagagtaagagctgtgaatgctcttggtgttggtgaggccagcagaagttca
gctgtatatagaatacctggtgcagcaccatcaaaatacccggatgatataggaggaggt
ggaggaactgtagggattctcaccatcacatggactcctctaccaccggaagaccaaggt
ggttctgggataggctatgttgtatattggagactggcgaacacaactaccaaatttatg
gaagcaactgtgacagaaaacgttggacagtttgcgacaacggttggctcagagtacttt
tatatgttatatgaagtaaaggtatctgccttcaatgaattcggacctggacctgtgtcg
cctggaggagtttatatatactcagcagaagaaatgcctataggagtggcaaggaatgtg
tatgcgtggccatacaacagcacagctctagaggtctcgtgggatgtaataccaaacgac
agagaacatatgaggggaaaacttcttggatatcaagtgaactaccaactgcgttttgtg
gaaggtgcgtcacttgatgctataagctggcgaggggagacatctagcggtatagtgata
ggcttagacacgtacacttggtatacagttgatgttcagctactaacaaatgcgggaatg
ggtcctaggggcgaagtttatcatgcacatacacacaaacaagcaccaatcttatatcct
actgaaatccatatatactctcatactgcggagagtgtaagaatagaatggaggggagtc
agcactacaagtgtggaagaaaatctagagggttacaaggtccgctactggccaacaaca
gatgatgtacgatctgcaaaagatgttgtaacagatagaatagaaactgaagctgttata
tatggaatacaaaaagacatagtttatgaatgcagggttttaggcttcagtcgtggaggg
gacggaaaacacagctcttctgtttattttactttaggtgggctggtagcgtttgatccg
tcatcatcggagattttagcatcagcaaatagctttcatccatcatacgtcacgtgcatc
ttatcactcgtttttgtttcttttataaatacatgtacatttttctga
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