Mercenaria mercenaria (northern quahog): 123561223
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Entry
123561223 CDS
T07835
Name
(RefSeq) X-ray repair cross-complementing protein 5-like
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
123561223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123561223
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
123561223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
123561223
NCBI-ProteinID:
XP_053382453
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All DBs
Position
16:complement(26892637..26932873)
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AA seq
722 aa
AA seq
DB search
MAANKEAIAIVLDVGPSMNSAPPGVATPLETALEAITMILQRKMFAESKDEIALILVGSD
DTDNPLANGECYEHISIANPLGIVDFDFLQLVQNDIKASSTAGDFLDGIVVGMDHLVNAV
QGKKGFNNKRLILMSDLGGEFGDDQLDSIIASIKTSETELNVIGPDYEEDDEDGSGDKGG
AQNGSAKPKTPQQQAGTALIKYILDEVDGECYSFSEALPALAYFQSRQVRPTAWKCPLEI
GPDLKIPINGYVKLKDFKLKQSWKKVYAKDTDMEVGTLRTYHKNDEEETEVDKEDMVEGH
RYGNTLVPMTDDDKLNMKYKAEKCFKVLGFTKAENVKRHEMMGDGVMSVVAEKGDEAAAV
ALSAIINALYETNMVAIARRVYNAASSPRVGCLIPHLKAGYECLYWFELPFMEDVRQFTF
GSLPVKEENQTNKKYKPSADQLSAVDSLITNMDLSTAGRDEEDKPCEVLKPKLTFNPHFQ
RLYQCLQHRALNPDDPLPDLSPIIANSLKPPEEVLTNCSQSMETLKEKFKLEVVKKKEEK
TGENMFQEKGESDGPPAKKVKVDDNLDGGMEDLAKSKVTEVGSTTPVDDFIAIVNRKDED
KFEEACGQMQKRIQQIVLDSFGDQFYEKAMDCLKCLREQCIKKLEAKSYNTFIKEFKETL
ISKARRDFLDKLCTDKQGLISKLECEDGASEDEVKQFNEGEESQKPEQPMEEDSADDLLG
EL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaataaggaggcaatagcaattgtgctagatgttggaccctccatgaactct
gccccacctggagtggccacaccccttgagacagctctagaagccatcactatgattctg
cagcgtaagatgtttgcagagtcaaaggatgagatagctttgatactggtgggctctgat
gacacggataatccactcgcaaacggagaatgctacgagcatatttctatagccaatcct
cttggcatcgtggactttgacttccttcagcttgtacagaatgacatcaaggctagcagt
accgcaggagattttctggatgggatagttgtaggaatggaccatctggtaaatgccgtg
cagggtaagaagggatttaacaacaagcgtctgatattgatgtcggatctcggaggagag
ttcggtgacgatcagcttgacagtatcattgccagtataaaaacctcggagacagaatta
aacgtcattggtcctgactatgaggaggatgatgaggacggtagcggggataaaggcggg
gcacagaacggttcagcaaaacctaaaactccacaacagcaagctggaactgctctcatt
aaatacatcctggatgaagtggatggagaatgttattctttcagtgaggcactaccagcc
ctggcgtattttcagtcgaggcaagtgcggccaacagcatggaaatgtcctttggagatt
ggacctgatctcaagataccgatcaatggttatgttaagttgaaggatttcaagctgaaa
cagtcttggaagaaggtgtatgctaaggacactgacatggaggttggaacattgagaaca
tatcacaaaaatgatgaagaggagacagaggtggacaaagaggatatggtagaaggtcat
cgctatggtaacacactggtcccaatgacagatgatgataaactaaacatgaaatacaag
gcagagaaatgtttcaaagttctaggatttacaaaggctgaaaatgtaaaaagacatgag
atgatgggagatggtgtcatgagtgtagtcgcagagaaaggagacgaggcagcagctgtg
gcattgtcggccattattaatgccctgtatgagacaaacatggttgccatagcgagaaga
gtttataatgcagcttctagccccagagttggttgtcttatcccacatttaaaggcaggg
tatgaatgtttatattggtttgaattaccttttatggaagatgtgcggcagtttacattc
ggatcgttgcctgtgaaagaagaaaatcagaccaataaaaaatacaaaccatcagcggat
cagttgtcagctgtggacagtttgataacaaatatggaccttagcacagcaggacgggat
gaggaggacaaaccatgtgaagttttgaaaccaaagttaacatttaacccacactttcag
agattatatcagtgtttacaacatagagcactcaatccggatgatccactgccagatttg
tctcccattatagccaattctctaaaaccacctgaagaagttctcacaaattgttcacaa
agtatggagacactgaaggagaagttcaagctagaggttgtgaagaaaaaggaagagaag
acaggagaaaacatgtttcaggaaaaaggagagtctgacggaccccctgccaagaaggtc
aaggtcgatgataacttggatggaggcatggaagatctggctaaatctaaagtcacagag
gttggttcaactacgcctgtagatgactttattgccatcgtaaataggaaagatgaagat
aaatttgaagaagcatgtggacaaatgcagaaaagaatacaacaaattgtgttggacagt
tttggtgaccagttctatgagaaagccatggactgtctgaaatgtctaagagaacagtgt
attaagaaattagaggccaaatcgtacaacacatttattaaagagttcaaggaaacgctg
atttcaaaagcaaggagggactttcttgacaaattatgtactgacaagcagggcttgatc
tcaaaactggagtgtgaggatggtgcatcagaggacgaggtcaaacaatttaatgagggg
gaggagtcacagaaaccggaacaaccaatggaagaagactctgctgatgatctgctgggt
gaattgtag
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