Mercenaria mercenaria (northern quahog): 123561259
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Entry
123561259 CDS
T07835
Name
(RefSeq) V(D)J recombination-activating protein 1-like
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
123561259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123561259
Enzymes [BR:
mmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123561259
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123561259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_10
Prok-RING_4
HTH_6
zf-RING_6
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
123561259
NCBI-ProteinID:
XP_053395673
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All DBs
Position
3:50914228..50916990
Genome browser
AA seq
920 aa
AA seq
DB search
MIFIQNQSAQTVESDFINLDKVFKSKNNFLEIFPNFIIIACTQRTVRFCLNKSQSGRKEK
PELCVKRKVTFSEKVTDTASETETGSETETGEDEPTIDSDSYSAAKRLRFQDVGSTSEEQ
FNCEITSIDIEKINEKKLAEIFQCSICKGVPTIPSLTRCSHIYCKSCILAWLKTANVCPV
CRSFITAADTASLSGQLLLLYETMTLSCKYTGCSFISTISNFKTHEDLCKFGKYPALFSA
SSKRVSTVTKVPIYDCSNKYLKQKRLKGLNDLVTEFCQTNTEDKGDALFFLLQQHLKDTN
DTRQNDINDIWRNINSKLTPSQCLALRVDTLQSKTQYKAQYNYLKKNVRNPLQSPSVIDD
LELLYAPSSTRYSIQGLEFTDNYYHTPTKVVNRTEYTCKDSSFEPLDVLQDFQPVMPEFA
SPNIKGVRWSYPDAIASTLRELEPKLVSGLKQNKIDPNDPNILLITSIKDGADGLGDVSI
HKELSDRFLPDKAFRFSFCVFKIEAVVSNREPVEIFVEEKPNSVRTNRPLLEAICDENNR
ASSLVCLLPIENERAFLKDKILRVQHKDGWRRHCLKFYTSMIDEKLDRKESGLAGSGSRY
LCTLCEATTQSAVKDLGSFQISRTYSETKEIAEYIRVNPDRLSQSAIDNISKGVKRTPTL
QAEAIEKCLDATHADINLGSFFKKLLIREIATVTQWEAIADVKPILKDAEVKFDMHLKKN
IGINPELMMLGNYARVLFNEANESKILSYLPNEDRRKNMSSVLQKFRFMRKVYRSKDPKK
ECPEDISKYKETAVEMAKLLLTHFGYASWPNYLHKIVETRSRIIESPNGPGTVGGISGEG
NECGNKIFRHMRKNLARKGNTQGGLRDVLWCHWLYSSPELSELATLTLKQVRCSLCFELG
HNRRTCVMNKSSTTSQDTQA
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgatatttatccaaaatcagtctgctcaaactgtagaatcagattttataaatttagac
aaagtattcaaaagcaagaacaattttctggaaattttcccaaactttataattatagcg
tgcacacagagaactgtgcgtttttgtttaaataaatctcaaagcgggcgtaaagaaaag
cctgaattgtgtgtgaaaaggaaagttactttttcagaaaaagtcactgatactgcctca
gaaactgagaccggctcagaaactgagacaggtgaagatgaacctacaatagattcagac
agttattcagcagctaaaagactgcgttttcaggatgtaggaagtacttctgaagaacaa
tttaactgcgaaataactagtattgatattgaaaaaataaatgaaaaaaaactagctgaa
atatttcagtgcagtatatgcaaaggcgtaccgacaattccaagtctcacgcgatgctcg
catatttactgtaagtcatgtattcttgcttggttaaaaactgctaatgtgtgtccagtt
tgcaggtccttcattacagcagccgatactgcttcactatcaggtcagcttttactgctg
tacgaaactatgacattgtcatgtaaatatactggttgttcatttatttcaacaataagc
aactttaagactcatgaagatttgtgtaagtttggaaagtatccagctctcttttcagct
tcttccaagcgagtatctacggttactaaagttccgatatatgactgttctaataagtat
ttaaaacagaagcgtctgaaaggtttaaatgacttggttaccgaattctgccaaacaaac
acagaagataaaggcgacgctttattttttcttttacagcagcacttaaaagatacaaat
gacactagacaaaatgacattaatgatatatggagaaatattaattcaaaattgactcca
agtcagtgtcttgctttacgcgtcgatacacttcagagcaaaacacagtataaggcgcaa
tataattatcttaagaaaaatgttcgcaatcccttgcaatcacctagtgttattgatgat
ctagaacttttatatgcaccaagctctacgcgctacagcatccaaggattagaattcaca
gacaattattaccatactccaactaaggtagtaaacagaactgagtacacatgtaaagat
agctcctttgagccactagatgttttgcaagacttccagccagtaatgccagaatttgca
tcacctaatattaaaggtgtgcgatggagctatcctgatgcaatagcaagtacattaagg
gaacttgagccaaaacttgtttctggtcttaagcaaaataaaattgacccaaatgatcct
aatatcttactaatcactagcattaaagatggtgctgacggtctaggagacgtgtcgatt
cacaaggaattgtctgatcggtttttacctgataaagcgtttcgattttctttttgtgtt
tttaaaattgaagctgtagttagtaatcgcgagccagttgaaattttcgtagaggaaaaa
cctaactcagttcgaacaaacaggccattgcttgaagcgatctgcgacgaaaacaataga
gcttctagtttagtgtgtcttttgcccatagaaaacgagcgagcgtttttgaaagataaa
atattaagagtacaacacaaagatgggtggcgaagacactgtcttaaattctatactagt
atgattgatgaaaaattggataggaaagagagcggtttagctggaagcggatctagatac
ctttgtacactttgcgaagccacaactcagagtgcagtaaaagatcttggcagtttccaa
atttctagaacttacagtgaaacaaaagaaatcgccgagtatatccgtgtaaatcctgac
agactttcgcagtcggctatcgacaacatatccaagggtgttaaacgtacaccaacctta
caagcggaagctattgaaaagtgtttagatgcaactcacgcagatataaacttggggtct
ttttttaagaaacttctcataagggaaattgcaaccgtaactcagtgggaagcaattgca
gacgtaaaaccaatccttaaagatgctgaggttaaatttgacatgcatttaaagaagaat
attggcatcaacccagagttgatgatgctagggaattatgctagggttttgtttaacgaa
gccaatgaatcaaaaatactttcatatcttccaaatgaagatagaaggaaaaacatgtca
agtgttttacaaaagttcagattcatgaggaaggtatatcggtctaaggatcctaagaag
gaatgccccgaagatatttctaaatacaaagaaacagctgtagaaatggccaagttactt
ttaacacatttcgggtatgcttcatggccaaattacttacataaaattgtcgaaacacgt
tcaagaataatagaaagtccaaacggtcctggtactgtaggcggtataagcggtgaaggg
aatgagtgcgggaacaagattttcaggcatatgcggaaaaacctagctagaaagggaaac
acacaaggtggtctaagggatgtcctatggtgtcactggctttatagtagtcctgaactt
tcagagcttgctacattaacattgaaacaggtaagatgtagtttatgttttgaactaggt
cataacagacgaacttgtgttatgaacaagtcatcaacgacctcacaggacacacaggcc
tga
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