Mercenaria mercenaria (northern quahog): 123561485
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Entry
123561485 CDS
T07835
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03010
Ribosome
mmer04120
Ubiquitin mediated proteolysis
mmer04137
Mitophagy - animal
mmer04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
123561485
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123561485
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123561485
04137 Mitophagy - animal
123561485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
mmer03011
]
123561485
04121 Ubiquitin system [BR:
mmer04121
]
123561485
Ribosome [BR:
mmer03011
]
Ribosomal proteins
Eukaryotes
Large subunit
123561485
Archaea
123561485
Ubiquitin system [BR:
mmer04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
123561485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
Ubiquitin_5
TBK1_ULD
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
123561485
NCBI-ProteinID:
XP_045209825
LinkDB
All DBs
Position
10:56700592..56706201
Genome browser
AA seq
135 aa
AA seq
DB search
MRPLSFKMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG
RTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLASKYNCEKMICRKCYARLHPRATNCRKR
KCGHTNNLRPKKKLK
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgcgccctctatcgttcaagatgcagatctttgtgaaaacattgactggtaaaaccatc
actttggaggtggagccatcagactccatcgaaaatgtgaaagccaaaatccaagacaaa
gaaggcattccaccagaccagcagaggttgatttttgctggaaaacagttggaagatggc
cgtactctgtcagattacaacatacagaaagaatccaccctccatcttgtgctaagactg
cgtggtggtatcattgagcctagtttgagacagcttgcttcaaaatacaactgtgaaaag
atgatttgcagaaagtgctatgcacgtctccaccctcgtgctaccaattgtaggaagagg
aagtgtggtcacaccaacaacttgagaccaaagaagaagctgaagtag
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