Mercenaria mercenaria (northern quahog): 123561492
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Entry
123561492 CDS
T07835
Name
(RefSeq) non-homologous end-joining factor 1-like
KO
K10980
non-homologous end-joining factor 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
123561492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123561492
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
123561492
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Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
Motif
Other DBs
NCBI-GeneID:
123561492
NCBI-ProteinID:
XP_045209832
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All DBs
Position
10:complement(56240224..56253554)
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AA seq
348 aa
AA seq
DB search
MTTEVEWRRRWKPDLEAFPWQPIRVDGSTYLLKYMFTTDSYKVLLTDLANFWHEELADQA
LQKRIKKLNPGIEAPVTRILDQIKGVLDKTQDDPNTSIKLSFKREADSEERKVMLVLHSE
LAGMPFIWNFQCRPADKSMGSEHLILPLMAMVGELTRRQQELFKIIQGKDKQIEDYKSQG
AKCTRKHIETPAFVETAFEMNMMTSKAFEQQIKGIELKTFDVKTQDLYRQIMSKRAWVNR
SPTKATSEDESLLDDMSSADDSRRTSTGQSWGNSRLPPSLQQSKSPTKSPAKSPNKTPSP
SKSSNNSTPETSPVKDTELLRRQALERKLELEESKKMEKAKKKKKIAF
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagaagtcgaatggagaaggagatggaaaccagatttagaggcgttcccttgg
caaccaatcagagttgatggtagcacataccttttgaagtatatgtttacaacagacagt
tacaaagtgttactgaccgatttggcaaatttttggcatgaggagttagcagaccaggcg
ttgcaaaagagaatcaagaaattgaacccagggattgaagcacctgttacaaggatttta
gaccagattaaaggtgttcttgacaaaacacaagatgatcctaacacttcaattaagttg
tcattcaagcgtgaagcagacagtgaagagaggaaggtgatgcttgttcttcattcagag
ctggcaggaatgccctttatatggaatttccagtgtagacctgctgacaaatctatgggt
tcagaacatttgatactacctctaatggcgatggtgggtgaactgacgcgccgacaacaa
gaactcttcaagattatccagggcaaagataaacagattgaagactataagtcacaaggg
gcaaagtgtactagaaagcatattgagacaccagcatttgtggagactgcttttgaaatg
aatatgatgacatcaaaggcatttgagcagcagattaagggtatagaacttaagacattt
gatgtaaagactcaggacctttacagacagatcatgagcaaaagagcttgggtgaacaga
tctccaactaaagctacatcagaagatgaaagcttgctagatgatatgagcagtgcagat
gatagtcgaaggacgtccactggtcagtcttggggcaactctcgtcttccaccatctctt
caacagtccaaatcaccaacaaaatcaccagcaaaatcaccaaacaaaacaccaagtcca
tccaaatcatcaaataactccacaccagagacatcacctgtaaaggacacagagctttta
cgtcgccaggcattggaaaggaaactagaattagaagaaagcaaaaagatggaaaaagca
aagaaaaagaagaaaattgcattttaa
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