Mercenaria mercenaria (northern quahog): 123561552
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Entry
123561552 CDS
T07835
Name
(RefSeq) transcription factor RFX4-like
KO
K09174
regulatory factor X 4
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123561552
Transcription factors [BR:
mmer03000
]
Eukaryotic type
Other basic domains
RF-X
123561552
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Pox_D5
COG5_N
DUF4358
Motif
Other DBs
NCBI-GeneID:
123561552
NCBI-ProteinID:
XP_053372893
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Position
10:53071937..53098014
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AA seq
755 aa
AA seq
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MSRNRNYIAINRTGNRKLPWHQHFQEQKATLPLICPGTESYLPFNRSNWLEHCLSNDQKS
DCNDVTDDIDSSFLGNESPEERKGTYTRLRSASKPHSTPQTLKWLEENYEIAEGVCIPRS
TLYVHYLDYCEKHDTQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIGVRESSKY
YEVAFSAKGVQSSADGKKDNTKQIIAYSPRSKLGTLLPDFPDIKDIKIPPNVAQEKVLTF
LMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPTHIKSILESKTLVTLVGVCDSILYR
AIANVLMPTVLQPLPESLTQVIRNFSVQLDDWLRQALDSLPESLQRVKFDLARRFSQVLK
RQTSLNHLCQAARTVINSAEITSQMLDDWFNVDLNSIIKQTLYTTESNSNIDNIVIVKLA
RDFEILLEEQAPLESYIEWLDGMIEQCVSKKCKQQGDGTPRVARQFLLMWSCVGTRVIRD
MTLHSAPSFGSFHLLHLMFDEYVLYMVENIHNHDKANDLLRAVKGEIAMDFLDELLLSVQ
YPCKSSILTDSMDTQRTTVIRGPELPFQNGEIEESSGYYSQNESVCFQQPVMCTNQRMIC
SSGQPLNQPPPFGNAFPTTCRHRTNSFYGIYSSQVPDVVSSNNTAVNSYDCNDWSTTGQI
GSSGLTNMASSKNFSDKNNLLNPGNAMEIQTVQLQTERRQNTSHYYGGFCGDQTSFKRCS
NGHNTFSKKCSEDIPNDTVRPNMSDMYYHHVTNLL
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaacagaaactacattgccattaatagaaccggtaacagaaagctaccctgg
catcaacatttccaggaacagaaagctaccttaccattaatatgtccaggaacagaaagc
taccttccctttaacaggtccaactggctggaacattgtctttctaatgaccaaaaatct
gattgcaatgacgtcactgatgacatcgatagcagtttccttggtaacgaatcaccagaa
gaacgcaaaggcacatatacaagactcagatctgcgtcaaagcctcattctacacctcag
actttaaagtggttggaagagaactacgagatagcggagggagtgtgtattcccaggagt
acattgtatgtacattaccttgactattgcgagaaacacgacacccagccagtgaacgct
gctagttttggcaagatcatcagacaacagttcccgcagttgacaacccgacgtctagga
acacgaggacagtcaaagtaccattattatggcattggtgtacgagaatcatctaagtat
tatgaagttgcattttcagcgaaaggagttcaaagttctgctgatggaaagaaggacaac
acaaaacaaatcattgcatactcgccacggtctaagcttggaactttgctcccggacttc
ccagatatcaaagacatcaagatacctccaaacgtggcgcaggaaaaggttttgacattc
ctaatgatgtacaggacccactgtcaaagaattctggacactgttataagagcaaatttt
gacgaggtgcaaagtttcctgcttcacttctggcaagggatgccaactcacatcaaatcg
atcttggagagcaagaccttggttacactggtaggagtgtgtgactccatcctctacaga
gccattgcaaacgtgctgatgcccactgtattacaacctttaccagaaagtctgacacaa
gttatacggaacttttctgttcagcttgatgattggttgcgacaggcgttagattctctg
ccggaaagcttacaacgagtgaaatttgatcttgccagacgattctcacaagtattaaag
agacaaacgtcactgaaccacctttgtcaagctgcaaggactgtgattaactcggcggaa
attacgtcacagatgttagatgattggtttaacgttgacctcaacagtattatcaaacag
actctgtataccactgagagcaacagcaacatagataatatcgtcattgtaaaacttgcg
cgggattttgaaatattactggaagagcaagcgccactggaatcctacatagaatggctt
gacggaatgatagaacaatgtgtttctaagaaatgcaaacaacaaggcgatggtactcct
cgggtagccagacagttcctgttgatgtggagttgtgttggaacacgagtgatacgggac
atgaccctgcatagtgcacctagctttggttcatttcacctgttacatctcatgtttgat
gagtatgtactctatatggttgaaaatatacacaaccatgacaaggcaaacgacttactg
cgtgcagtcaaaggagaaatagcaatggattttttagatgaacttctgctatctgtacaa
tacccttgcaaaagcagtattttgactgactcgatggatacacaaagaacaactgttata
cggggacctgaattaccattccagaatggcgaaatcgaagaaagttccggatactactct
caaaacgaatcagtatgttttcaacagccagttatgtgtaccaatcaaagaatgatttgt
tcctctggacagccattgaaccaaccacctccattcggaaatgctttcccaacgacatgc
cgtcatagaacgaattctttttacggcatttattcctcacaagtaccggatgttgtttcg
tcaaataataccgcagtaaactcttacgactgcaatgattggtcaacaacaggacaaata
gggtcatcgggattaacaaacatggcgagcagtaagaatttttctgacaaaaataattta
ttgaatccgggaaatgctatggaaatacaaactgttcaactacagacggaacgccgacaa
aacacgagtcattattacggaggattttgcggagatcagacaagttttaagagatgttca
aacggacacaatacctttagtaagaaatgttcggaagatattccaaatgacactgtcaga
ccgaacatgtctgacatgtactaccatcacgtaacaaaccttctttga
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