Mercenaria mercenaria (northern quahog): 123561700
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Entry
123561700 CDS
T07835
Name
(RefSeq) nicastrin-like isoform X1
KO
K06171
nicastrin
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
123561700
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Gene cluster
GFIT
Motif
Pfam:
Ncstrn_small
Nicastrin
Peptidase_M28
LarA_C
Motif
Other DBs
NCBI-GeneID:
123561700
NCBI-ProteinID:
XP_045210179
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Position
10:complement(47043609..47101014)
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AA seq
710 aa
AA seq
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MSNFLLIFTVFFLCSKVYCERTKEKIYVDITSSGRSPCFRRLNGTHQIGCTSDPKGNVGV
VHYVNTSSDIDWLLEKGPHKPYAVLLSARYFNMGTVKRLQASGKVNGIMVIQVAGKEDKY
PPAEAFSPDKSCPNQGYGLYSGNEDYEGCSKAVWNPVGQGLMFQDLSIPIFILTQEKDVD
FIIEKCYKKFNERDSAGKARDYPLCAVQLKDRMDGAKDSETCTRRTNHQLNLNPDRYCDA
LGDQNVYATVKDITNEETRENKSVIVVAARMDSFSMFEDHYPSADNHVSGIVALLAVAEA
IGKVKDKIRDSNLTKDVMFTFFQGEAFDYIGSGRMVYDMENNLFPSSVTGKYIQKINFRH
ISHFVEVNQLAYRDEGKVWIHTDPISRPKLPEVDKMVSDLKDIDPSLVEVADMSLPLPPA
SVQSFLKKADLPAVVVTDHKKEYTNKFYNSRLDLASEIKANCEKGSNKSECYNTVSEQAK
NLTQIADMLAKFLYKLATGENSTNDVVVDENTVNHLLYCYLISPNCELFKQSLSKDKADQ
LADEPYQFYVGVNTQLNNYTALTNQMLMVYLGDRVENVIAKNCTTDTKKQAVYHEQWIQG
PLNENGTRNPYCIRGSANFSLAISKAFEIDGYDFKSRQFSTWTESVWQIDAINVRIFLIP
SKKFETVTLSIGIVVLVVSMVIVYLINRRVDVLFAPPGPFQEYRTITTSM
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatttcttattgatatttaccgttttcttcctatgttcaaaagtatattgtgag
agaacaaaagagaagatctatgtagatataacttcaagtgggaggtcaccatgcttcaga
aggttgaatggaacacatcagattggatgcacatctgatccaaaggggaatgttggtgtt
gtacattatgtgaatacatcatctgatattgattggctcctggaaaaaggcccacacaaa
ccatatgctgtgttgctcagtgctcgttatttcaacatggggacagtaaaaagactgcag
gcgtctggaaaagtgaatggcattatggttatacaggtagcaggtaaagaagacaagtac
cccccagccgaggcattttctccagacaagtcctgtcccaatcaaggatatggtttgtat
agtggtaacgaagattatgaaggctgttccaaggcagtgtggaacccagttggacagggc
ttaatgttccaggaccttagtataccaatatttattctgacacaagaaaaagatgtggac
ttcatcatagagaagtgttacaagaagttcaatgagcgcgactctgctggtaaagctaga
gactacccactgtgtgcagtacagctcaaagatcgaatggacggggcaaaagactctgag
acatgcacacgtagaactaaccaccagttgaacttgaatccagacagatattgtgatgct
ttgggagatcaaaatgtttatgcaacagtgaaagacattactaacgaggagacaagagaa
aacaaatctgtcattgttgttgctgcaaggatggactctttctcgatgtttgaagatcac
tatcccagtgcagataaccatgtgtcaggtattgtagctttgctggcagtagcagaggcc
attggaaaggtgaaggacaaaatacgggactcaaacttaaccaaagatgtcatgtttaca
ttctttcaaggggaagcatttgactatataggatcaggacgaatggtttatgatatggaa
aacaacctctttccatcgtctgtaactggaaagtacatacaaaagataaattttagacat
atttcacattttgtggaagtaaaccaactggcgtatagagatgaaggaaaggtctggatt
catacagatccaatctcaagacctaaactgccagaggttgacaagatggtgtcggacctg
aaggatattgacccctcgcttgttgaagtggcagatatgtcacttccgttacctccagcc
agtgtccagtcattcctgaaaaaggcggatctacctgcagttgttgtaacagatcataaa
aaagaatatacaaacaaattttacaacagtaggttagatcttgcttcagaaattaaagca
aattgtgagaaaggttcaaacaagtcagagtgttacaatacagtttcggaacaggctaaa
aacctcactcaaattgccgatatgcttgccaagttcttgtataaacttgctactggagaa
aattctacaaatgatgtagttgtggatgaaaatactgttaatcatttattatactgctat
ctgatatctccaaactgtgagctgtttaaacaaagtcttagtaaggacaaggctgaccaa
ctggctgatgaaccttaccaattttatgttggtgtgaatacacaacttaacaactatact
gctttaaccaatcagatgctgatggtttaccttggagaccgtgtggagaatgtcatagca
aaaaactgtacaacagatacaaaaaaacaagcagtatatcatgaacaatggatacaggga
cctttgaatgaaaatggtacaagaaatccttactgtatcagaggaagtgctaatttctca
cttgctatatctaaagcatttgaaatagatggctatgatttcaagtcacgacagttttcc
acatggacagaaagtgtctggcaaattgatgcaataaatgtcagaatttttctcatccct
agtaaaaaatttgagactgtgacactgagtattggaatagttgtgttggtggtttccatg
gtgattgtatatttaatcaacagacgtgtagatgttctgtttgccccccctggaccattt
caagagtaccggacaataacgacttcaatgtga
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