Mercenaria mercenaria (northern quahog): 123561710
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Entry
123561710 CDS
T07835
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04145
Phagosome
mmer04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
123561710
09142 Cell motility
04814 Motor proteins
123561710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmer03036
]
123561710
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mmer04812
]
123561710
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
123561710
Cytoskeleton proteins [BR:
mmer04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
123561710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Dynein_IC2
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
123561710
NCBI-ProteinID:
XP_045210190
LinkDB
All DBs
Position
10:46318755..46349450
Genome browser
AA seq
680 aa
AA seq
DB search
MSDRKAELERKKAKLEMMRKERQEKERIRKMKEQTEETKPQVSQSARDEADKLLQDLGIP
PAGETAESSTPSDKGSESTDGSKEPTPHPTPTKTGRGKTVKLAVAKVSETNIPPRENVTY
SKETQTVGLEPPERDGHGGVHHRKGPWDYYVCDGLSDTSSPSHRSKLGSHGSPRHYGSPR
FHGSDVGFEWDDEFSYYDEDDDQEPDTDSIDISLGTMQHPHKMPHVEMVAPSHTAEDKPP
VHLRELSEEEKSTILLSEEFRSFMDHTSRIVERALDEVDVDIDYSRSADDELSNQDLAGE
RLKVNREFFDERWSKHRIVTSLDWSTQFPELLVASYSANEDAPHDPDGVALIWNSRFKKN
TPEYVFHCQSAVMSSCFAKFHPNLVVGGTYSGQIVLWDNRVLKRTPIQRTPLSASAHTHP
VYCVNVVGTQNAHNLISVSTDGKMCSWSLDMLSQPQDCMELQQHKQSRAVNVTSFSFLSG
DVNNFVVGSEDCSVYAACRHGSKAGVSEIFEGHQGPVTGIDCHKVAGQIDFSPYFLTSSF
DWTIKLWSMKDNKFIHSFEDNSDYVYDVQWSPIHPALFASVDGMARLDLWNLNQDTEVPS
ASVSMDTGVALNHLRWHQSGHTIAVADDMGHIYNYDVAESFANPKSDEWSRFVQTLQELR
QHAAEREEDTNLAGLSSPLR
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaccggaaggcagagttggagaggaagaaggcaaagttggagatgatgcggaaa
gaacgacaggaaaaggagagaattcgaaaaatgaaggagcaaacagaggaaacaaagcca
caggtgtcacagagtgctcgagacgaggcagacaagctgttacaggacctgggcattcct
ccagcaggtgaaacagctgaaagttcgacaccttcagacaaaggctctgaatccacagat
gggagtaaagagccaacaccacatccaacaccaaccaaaacaggcagaggaaagactgta
aagttagctgtagctaaagtatcggagacaaatattccaccacgagagaacgtaacctac
tcgaaggagacacagactgtggggctcgaaccaccagaaagagatggacatggtggggtg
catcatcgaaagggaccgtgggactattacgtatgtgacggtctttctgacacgagcagc
cctagtcatagatctaaacttggatctcatgggtccccacgacattatggctcaccgaga
tttcacgggtccgatgtcggattcgagtgggatgatgaattctcgtattatgatgaagat
gatgaccaggaaccagacaccgattccattgacatctcgctgggaaccatgcagcaccca
cacaagatgccccatgtggagatggtggctccctcccacactgcagaggataaaccacca
gttcatttgcgggagctcagtgaggaagagaagagcacaattctattgtctgaggagttc
cggtcattcatggaccacacgtcacgcatcgtggagcgtgccctggatgaagtggatgtt
gatatagattacagcagatctgcagacgatgagttaagtaatcaagatcttgctggagaa
aggttgaaggtgaacagagaattttttgatgaacgttggtccaaacataggatagtaact
agtcttgactggtcaacacagtttccagagctacttgttgcctcatacagtgctaatgag
gatgcaccgcatgaccctgatggtgttgccctaatatggaattcacgctttaagaaaaat
actccagaatatgttttccattgtcagtctgcagtaatgtcaagctgctttgccaagttt
caccctaacctagttgttggaggaacatactctggtcagatcgtgctgtgggacaaccgt
gtactgaagagaacaccgatacagagaacaccactgtcagcctctgcacatactcatcca
gtgtactgtgtaaatgtggtagggactcagaatgcacacaatctgatcagtgtatctaca
gatggtaaaatgtgttcatggagtcttgatatgctttcacaaccacaggattgtatggaa
ctacaacaacataaacagagtagagcagtgaatgtgaccagtttctccttcctgtcagga
gatgtgaacaacttcgtcgttggcagtgaggactgttcagtgtatgctgcatgtagacat
ggcagtaaagctggcgtcagtgagatatttgaaggacatcaaggacctgttactgggata
gattgtcataaagtagcgggacagatagatttctcaccatatttccttacgtcttccttt
gactggaccataaaactttggagcatgaaggacaacaaatttatccattcatttgaggac
aacagtgattatgtatatgatgtacaatggtccccaatacacccagcattgtttgctagt
gtagatggaatggccagactagatttatggaaccttaatcaagataccgaggtaccatca
gcatctgtttccatggatactggtgtagcactgaaccacttacgctggcatcagagtgga
catactatagcagtggcagatgatatgggacatatttataattatgatgtagctgagagt
tttgcaaacccgaagtcagatgaatggtcaagattcgtgcaaactttacaagaactgaga
caacatgcggcggaaagagaagaagatacaaatttagctggcttgtcgtcgcctctacga
tga
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