Mercenaria mercenaria (northern quahog): 123562109
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Entry
123562109 CDS
T07835
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04120
Ubiquitin mediated proteolysis
mmer04137
Mitophagy - animal
mmer04144
Endocytosis
mmer04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123562109
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
123562109
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123562109
04137 Mitophagy - animal
123562109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123562109
04121 Ubiquitin system [BR:
mmer04121
]
123562109
03029 Mitochondrial biogenesis [BR:
mmer03029
]
123562109
Enzymes [BR:
mmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
123562109
Membrane trafficking [BR:
mmer04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
123562109
Autophagy
Mitophagy
Other mitophagy associated proteins
123562109
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
HECT type E3
123562109
Mitochondrial biogenesis [BR:
mmer03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
123562109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
123562109
NCBI-ProteinID:
XP_053391043
LinkDB
All DBs
Position
2:complement(35900541..35984833)
Genome browser
AA seq
829 aa
AA seq
DB search
MITCDSHVHLHNYTAYIAFFITVFCAKNLCKRDFFRLPDPFAKISVDGSGQCHSTEVCKN
TLDPKWNQHYDLYIGQTDSVTISIWNHKKINKKQGAGFLGCVRIMSNAITQLKDTGFQRL
DLQRNNADDPEPVRGQIVISLISRDRGNSGIGPAVTNSTQINTIPNDVHELPDGWEERRT
ANGRVHYVNHLTRTTQWEPPTRPATDSSSVRITTSTASPTTSNSSSSERRSSSTTRLSSS
ASHRHRDRANSSAHRHSTSSLNPPRVHSAHSSVTRNNDLSNNSNSEDNTSSPSEGEFPRR
RSTRRRNYLNRNQLHNALDLPQGYVRITNRITNRSADSGNGNYHVEQRTTQQGQVYFLHT
QTGVSTWHDPRVPRDISNLDVLERELGPLPPGWEARHTGNGRVYFVDHNNRTTQFTDPRL
TSNIDLIQSRIKNTSDKENENPVPKYKRDLVHKMKILKQEFTSLQPQGGHCRLEVSREEI
FEDSYRQVMKMRAKDLRKRLMVKFKGEEGLDYGGVAREWFCLLSHEMLNPYYGLFQYARD
DIYTLQINPDSHVNPEHLSYFHFVGRILGMAIFHGHYLDGGFTMPLYKQLLQKQVTLDDL
ESVDPDLHRSLLWMLDNDIEEVLDHTFCVESHSFGQFQQHELKPGGDDIKVTEENKKEYV
KLYVQWVFMRGIEAQFLALQKGFHEIIPQHLLRPFDERELELMIGGLGKIDLDDWKLHTR
LKHCTPDSNIVKWFWKAVDNYDNEMRARLLQFVTGSSRVPLQGFKALQGSTGAAGPRLFT
IHQVDTNTDNLPKAHTCFNRIDIPPYESYEKLYSKLTCAVEETCGFAVE
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgattacgtgtgattctcatgttcatttgcataattatacagcttatattgctttcttt
attacagtgttctgtgccaagaatttgtgcaaaagagacttctttcgattgcccgatcca
tttgcaaagatcagtgtagatggttcaggacagtgtcattcgacagaagtttgtaagaat
actctagacccaaaatggaaccagcattatgatctgtatattggtcagacagactcggtg
acaataagcatatggaatcacaagaagatcaacaagaagcagggtgcaggatttctagga
tgtgtacgcattatgtcaaatgccattacacagctcaaagatactggatttcagcgcctt
gacctgcagcgtaacaatgcagacgatcccgaacctgtgcggggacagatcgtgatcagc
ttgatttcacgtgaccgtggtaactcagggataggacctgccgtgacaaactcgacacag
attaacaccattcctaatgatgttcacgaacttcctgacgggtgggaggagaggagaaca
gccaatggaagagtccattatgtaaaccacctcacccgtaccacacaatgggaacctccc
accagacctgcaacagactcatcatcagttagaattacaacatccacagcatctccaact
acgtccaacagcagcagcagtgagagacgatcatcttcaactacacgtctcagttctagt
gcttcccacagacatcgtgatcgtgcaaactctagcgcgcacagacacagtacatcttca
ttaaaccctccgcgagtgcacagtgcccatagttcagtgactcggaataatgacctcagt
aataacagcaatagtgaggacaacacgagtagtccgtccgagggcgagtttccccggcga
cggtctacccgtagacgcaattatttaaataggaatcagttacataatgcattggattta
ccacaaggttatgttcgaatcacaaatcgaatcacaaatcgttcagctgatagtggaaat
ggtaattaccatgtggaacaacgaactactcaacagggtcaagtatactttctccacaca
cagacaggtgtgagtacgtggcacgatcctcgagttccaagagacatatctaatctggat
gttttggaacgagagttgggtcctttgccgccgggttgggaagcacgacacacaggaaat
gggcgtgtctatttcgttgatcacaacaacagaacaacacagttcacagatccaaggctc
acctctaatatagacttgatacaaagtcgaataaaaaatacaagtgataaagagaatgaa
aatcctgtgccaaaatacaagcgagatttggtccataaaatgaagatattaaaacaagag
tttacaagtttacaacctcagggcggacattgtcgattagaagtttcaagagaagaaatt
tttgaggattcatatcgacaagtcatgaaaatgcgagcgaaagatttacgtaaacgttta
atggtgaagtttaaaggagaagagggcctagattatggtggtgttgcaagggaatggttt
tgtttgctgtctcatgaaatgttgaatccatactatggcttattccagtacgctagagat
gatatatacactttacagatcaacccagactcgcacgttaaccctgaacatttgtcgtat
tttcattttgttgggcgtattctgggcatggcaatatttcatggacattacttggacggt
ggcttcacaatgcccctgtataaacagttgttacagaaacaagtgaccttagatgacctt
gaaagtgttgaccccgaccttcatagaagtttactatggatgttggacaatgatatagag
gaagtattggaccatacattctgtgtagagagtcattcattcggccagtttcagcagcat
gaactcaaacctggcggtgacgacatcaaagttaccgaggagaacaagaaagaatatgtc
aagttgtatgtacaatgggtattcatgcgaggtatagaggcacagttcctggcattacag
aaaggttttcatgaaatcattccacagcatttactgagacccttcgatgaaagagagtta
gagttaatgattggtggtttagggaagatagatttagatgattggaaacttcatacaaga
ttaaaacactgcacaccagacagtaatatagtgaaatggttctggaaggcagttgataac
tatgacaatgaaatgagggcaagattattacagtttgttacaggaagttctcgagttcca
ctccaaggatttaaagcattacaaggatcgacaggagcagctggaccacgattgtttacc
attcatcaggtggacacaaacacggacaatttacccaaggctcatacatgtttcaatcgt
atagatatcccaccttacgagagttatgagaaactgtactccaaattgacatgtgctgtt
gaggaaacctgtggttttgctgtggaatga
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