Mercenaria mercenaria (northern quahog): 123563051
Help
Entry
123563051 CDS
T07835
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123563051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmer03021
]
123563051
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123563051
Transcription machinery [BR:
mmer03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123563051
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123563051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCHC
zf-CCCH_2
Torus
zf-CCHC_3
zf-CCCH_3
zf-CCCH_4
zf-C3H1
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
123563051
NCBI-ProteinID:
XP_045211551
LinkDB
All DBs
Position
2:3387784..3400083
Genome browser
AA seq
302 aa
AA seq
DB search
MQDVVAPVSHITFDIEIALNNQLGSMPLPFPGMDKSGAAICTFFLTPVGCSKATACPFRH
IKGEKTVVCKHWLRGLCKKGDDCEFLHEFDMTKMPECFFFSKYGQCNNKECPFLHIDPEQ
KVKDCAWYDRGFCRHGPNCKNRHVRRLICQNYLCGFCLDGPKCKFMHPRYDLPVQDDKTK
KFHQTVTCHNCGESGHKSYQCPKLHAPSVSTVITTSGNTVEIKPVGTRIGAGIPGSGSHY
GRGTFAHRGQPRLGFNFKSDNDQNQNLEFVTCFKCGLKGHYANRCPKGDLAFLSSSNIQT
TT
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatgttgttgcaccagtttcacatattacatttgatattgagattgctctcaat
aatcagcttggttctatgcctttgccattccctggaatggacaaatctggggcagcaata
tgtacatttttcctgacaccagtagggtgcagcaaggccacagcttgtccatttagacac
attaaaggggagaaaactgtggtttgtaaacactggctaagaggtctgtgtaagaaggga
gacgactgcgaattcttgcacgagtttgacatgaccaagatgcctgagtgcttctttttt
agcaaatacggtcagtgtaacaataaggaatgtccttttctacacattgatcctgaacag
aaagttaaagattgtgcatggtatgacagaggattttgtaggcatggaccaaactgtaag
aaccgtcatgtaaggcgactgatttgtcagaactatctctgtggattctgtttagatgga
ccaaagtgtaaattcatgcaccctaggtatgacttacctgtacaagatgacaaaacaaag
aagtttcatcaaacagttacctgtcacaattgtggggaaagtggtcacaagtcttaccag
tgtcctaaactacatgccccctcagtatctacagtcattacaactagtggtaatacagtc
gaaataaagcctgtaggaactcgtatcggtgcagggataccaggcagtggatcccactat
ggcagagggacttttgcacacagaggtcagcctagactaggatttaacttcaaatctgat
aatgaccaaaatcagaatctagaatttgtcacatgttttaaatgtggattaaagggccac
tatgccaacagatgtcctaaaggggaccttgcttttcttagttcttcaaacatacagaca
actacctga
DBGET
integrated database retrieval system
