Mercenaria mercenaria (northern quahog): 123563145
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Entry
123563145 CDS
T07835
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like
KO
K03267
peptide chain release factor subunit 3
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123563145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123563145
03012 Translation factors [BR:
mmer03012
]
123563145
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123563145
Translation factors [BR:
mmer03012
]
Eukaryotic type
Release factors
123563145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
G-alpha
Motif
Other DBs
NCBI-GeneID:
123563145
NCBI-ProteinID:
XP_045211705
LinkDB
All DBs
Position
2:9992645..10022621
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AA seq
561 aa
AA seq
DB search
MASTNNQNSAPDSWDSEMNEEQVDDKLNKPLSALNINAPAFVPGQNPYAVSFVPSGVPEP
ADETSAEGTKPATETEMAVDEDAGGGKEGGEEVADDWGAEEEDEEGDIDEDEEIEGAGDI
EKPKKIAVTSEPKVKKAHMNIIFIGHVDAGKSTIGGQILYLTGMVDKRTLEKYEREAKEK
NRETWYLSWALDTNLEEREKGKTVEVGRAYFETENKHFTILDAPGHKSFVPNMIGGASQA
DIAILVISARRGEFETGFERGGQTREHAMLVKTAGVKKLVVVINKMDDPTVQWAESRYME
CKDKLVPYLKKCGFNPKTDLIFFPVSGLTGAFLRDVPPEDICSWYRGPSLIEYLDGLPAI
SRALDKPFRMPVVDRYKDMGTILIGKVESGICSKNQSVLLMPNRCTVKIMQLWSYDEETD
EVHPGENVKCKVSGIEEEDVSQGFVICALDAPCNTGRIFDAKIVILEHKSIICAGYSAVL
HLHTAAEEVTIKNLICLIDKKSGKKTKTRFIMQDQIGIARFHVNAGVICMETFSDFPQMG
RFTLRDEGRTIAIGQVLKVIE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacaaacaatcaaaacagtgccccagattcttgggattcagaaatgaacgag
gaacaagttgatgataagttgaacaaaccgctatctgccctaaatatcaatgcacctgcg
ttcgttcccggacagaatccatatgcagttagctttgtgccttccggtgtgccagaaccg
gccgatgaaacatctgcagaaggtacaaaaccagcaactgaaacagaaatggcagtcgat
gaagatgcaggtgggggaaaagaaggtggtgaagaagttgctgatgattggggagcagag
gaggaggatgaggaaggagatatagatgaagatgaggaaatagaaggggcaggagatatt
gagaaaccgaagaaaattgctgttacatcagaacctaaagtcaagaaggctcatatgaat
attatcttcattggtcatgttgatgcaggcaaatctaccattggagggcagatactgtac
cttactggtatggtagataaaagaacactggaaaaatatgaacgagaagccaaagagaag
aacagggaaacttggtatttgtcgtgggcattagatactaacctagaggagagagagaag
ggtaaaactgtggaggtgggcagagcttactttgagacagaaaacaaacatttcaccatc
cttgatgcaccaggtcacaaaagttttgttcctaacatgattggaggggcttcacaagca
gacatagccattctggtgatatctgcaagaagaggagagttcgagactggttttgagaga
ggaggacagacaagagaacacgctatgttagtgaaaacagctggagtgaaaaaacttgta
gttgtaattaataaaatggatgacccaactgtacaatgggcagagtctaggtacatggaa
tgcaaagataaattagttccatatctaaagaagtgcggcttcaatcctaaaacagatcta
atatttttcccagtatctggtttaacgggagcttttctacgtgatgtccctccagaagat
atttgctcatggtacagaggcccatcattgattgaatatttagatggacttccagcaatc
agtcgagcattagataaacctttccgtatgccagtggtagacaggtacaaagacatgggt
acaatattgattggcaaagtggaatctggaatctgctctaaaaaccagagcgttttactc
atgccaaataggtgtacagtaaagattatgcagttatggtcctatgatgaggaaacagat
gaggttcatccaggagaaaatgtcaaatgtaaagtgtcgggaattgaagaagaggatgta
tctcaaggctttgtgatatgtgcgttagatgcaccttgtaatacaggtagaatatttgat
gcaaagatagtgatactggagcacaagtcaatcatctgtgcaggttatagtgctgtgtta
catcttcatactgcagcggaggaagtgaccattaaaaacctgatatgtttaatagacaaa
aaatctggtaaaaagactaaaacacgatttataatgcaagaccagattggtatagctcga
ttccatgtgaatgctggtgtgatctgtatggagacattctcagacttccctcagatgggt
agatttacattacgagatgaaggtcgcacaatagccataggtcaagtattaaaagtaata
gaataa
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