Mercenaria mercenaria (northern quahog): 123563211
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Entry
123563211 CDS
T07835
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123563211
Enzymes [BR:
mmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123563211
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
U-box type E3
123563211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-C3HC4_3
zf-C3HC4_2
U-box
zf-RING_2
zf-CCHC_3
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
123563211
NCBI-ProteinID:
XP_045211821
LinkDB
All DBs
Position
2:complement(12612669..12670233)
Genome browser
AA seq
1889 aa
AA seq
DB search
MAVVHYKFKNSVEYDSLTFDGLSISLRDLKQGIMKKKKMRTEDNDLQVVNAQTGEVYSSP
SLMIPKNTSLIIARIPVGGGKKTKDDTAQNKAMKWAAFREKTQAAISAAETGGFNTEKLK
QSSDLVNAQSSEIEKIAEMMKQSTKDFDPSNYTYKFPTGVPNPSYICRKCGKGGHYIQNC
TNEPLEGSDSPSDVPRMKRPTGIPVDSMVFVDEPLPGTYVTHSGKYAVPKIDVAAYAEGK
KERPPFLPEVEKKHVVLKKPIPKELKCPLCGDLAKDAVVIPCCGISYCDECIRNKLLETE
DHVCPSCDSMDVAPDGLIANQMLRRAVTNFQNETGYVKRVIDIKQAQAKAAEAAKAAAAA
SQVLKMQAGAVIPRGPSVLDYKPPAKPATPPAPQPVASSAKSLPPPNVSSSSQDQLKMNI
TPQKTYIPPSVAQEPPTPTQDEPMRSSSYTQPHVNSSANQSISVGEPLQTLVGQTLQPVN
RNQRRPATTGNFDPYYKPSITSTSVPPPTVPPYPPPTAFPPPGIPPPYVAPPVLPLVRPP
IVPPVVPPVYPAALPPGPAVPAPPLNMPKPLSKTEFLEEKNRILREELERKDKDPLLEFA
KKLEQRKERTFKSRSRSRSPRHRSRSLSRPRYRSRSRGRSFSRSPRRSFTPRRSSLSPRR
SYSPRRYSPRRSRSPRYSPRRYYSPRRSPRRSLSPRPRYRSYSRSPVRRRSFTRSRSRDR
RSPFRRSLSRSPLGRRSPFRRSYSRGRYTPPRRSLSPYRRSPLRRSRSRGRSPIDQYRRS
PMRYSPKRKRSSLKRSPIRRSKSPLKRSPLRRSKSPLKRSPLRRSKSPLKRSPLRRSKSP
LKRSPLRRPKEKPLPRAKSPKQQRDAKKKPAPKQKDKDSNDTEPVLNANMNNKQVKSAEP
NKENIPAKAIKPVNTRSNNIVINIVDSTTTDENSEVEGKSIKTDSNQNENAVSNKSNDKT
DKSAIESKANKNLGENENKQVNKSENEAKLKSRSRSKSKEKAGPSAKQSKPRKKRSPKRK
EKSVSLSPERVKSPLRMPYRDRFEGGNRDRFEGGRGRMDRIEGGRERFEVGRGGYGREWD
RSRDADPYFRGRQNAGYRGRDFRGRGRGSDFRGGIGDYGVQQPPDFRNQDYRPPPPQQPG
DFASFPPLPDPAAMAGPYNRNYPQRGSPGFPANYGPNFPYPPPRDPREDPNWQGLVRDED
ILKFEQYKQMYDFYSNSRTYGFPPAPITSTVPTGQTPPQGPPPAPPGTTPIPTPPERAGS
PGRRRSVSPRRHRSPTRREGKDRRDRERDYRDKRSPERRREDRSDREDRSPDRKRDFTPE
KKHTTDESGRDETSPEKKSKDNDERETKKERKARRKKEKAEGGEKKKKKKKDKDKTKTKK
DKAEKKAKKLKLAENSDNEEQVNKKSRRTQSQNESDSEKSDTDTENKAKTKTSRQNSAAS
EIEIKAKTESSRHNSTAQSDSSDHEKDEVKNSERTVKKEVKDDESEVNKPGSVQKSEGTD
SEIDEKKHSAKNLKQEPEESEVEKDVPEKQEKRRSIKRGKPDADAEEATDAKKAKLEEDV
KEESREEKMDTSGGVSPAGSEGFDDIPHPEDELMLDPPELSKWEKWEKDDDPYDLSPEPS
KAREKWKPGKQTFLPRSVIEKAEHALAQKVMKPTTVSSAVSVIQPAKKEMKSETKEVEPV
HVKREKSPVVEPKRRVFMEPEKKKDERRIGSKQQHNVKITVTSDEKRKVATENDLRNKLR
EKRRESEHSRDYDRSRERDRDRSPERVRRKDSHGFKDRRSSRDYDRQDSRGAKGDLDRGR
AAGRSISRKDSVIDDSRFVPDYDDESYSEDENSEDSSTDSSSDEEVVHKKHKHKKNKHKK
DKKQKKKKEKKKKKHKGEKEKKMKSSVGK
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atggcagttgtgcattacaaattcaagaacagtgtggagtatgactcgctcacgtttgat
ggtttgtcaatatccctccgggatttgaagcagggaataatgaagaagaaaaaaatgagg
acagaggacaatgatctccaggtggtcaacgcacaaacaggagaagtgtacagctcaccc
agccttatgattccaaagaacacatcacttatcatagcacgaatccctgttggaggtgga
aagaaaacaaaagatgatacagcacaaaataaagcaatgaaatgggcagcgttcagggag
aagacccaggcagctataagtgctgcagaaactggaggatttaatacggaaaaacttaaa
cagtcttcagatcttgttaatgcccagtcctcagagatcgagaaaattgctgagatgatg
aaacaatcgacaaaagattttgatccctctaactatacatacaagttcccaactggtgtc
ccaaacccttcatatatttgtcgtaaatgtggtaaaggtggacactatatacagaattgt
accaatgagccactggagggatcggacagcccatctgatgttccccgaatgaagaggcct
acagggattccagtagacagtatggtgtttgtagatgagccgttaccaggaacatacgta
actcattctggaaaatatgcagtgccaaaaattgatgttgcagcatatgcggaagggaag
aaggagcggcccccattcctaccagaagtggagaagaagcatgtggtactgaagaagcct
ataccaaaggaactgaaatgtcctctgtgtggggatctggccaaagacgctgtggtcatt
ccctgctgtgggatcagctactgtgatgaatgtattcgtaataagctgttagaaacagag
gatcatgtctgcccttcttgtgacagtatggatgtagcacctgatggactgatagccaat
cagatgctgcgaagggctgtaactaatttccagaatgagacaggatatgtcaagagagtt
attgacatcaaacaagcacaggcgaaggcggcagaagcagcgaaagctgcagctgctgca
tcacaagtgctaaagatgcaggctggagcagttatccctcgtggtccgtctgtattggat
tataaaccaccagctaagccggcaacgccaccagcacctcagccagtggcatcatctgcc
aaatcgctgcccccaccaaatgtctcatcttcctcacaggatcagttgaaaatgaatatt
acccctcaaaagacgtatataccaccatcggttgctcaggagccgccgactcctacgcag
gatgaacccatgcgatctagtagctatactcagccgcatgtgaacagttcagcaaatcaa
agcatatctgtgggggaaccactacagacattggtgggtcaaacattacagcctgtaaat
agaaatcagaggagaccagcaactacagggaactttgacccatattacaagccatctatc
acaagtacgtctgtacctccgcctacagtgcctccatatccaccccctacagcgttcccg
ccccctggcatacctccaccatatgtggcgccacctgtcttgccattagtgagaccaccc
attgtgccccctgtggtaccaccagtataccctgctgctctgcctccaggcccagcagtc
ccagcacccccactcaacatgccaaaacctctgtctaaaacagaattcctagaggaaaag
aaccgtattttaagggaggaactagagaggaaggataaagaccccctactagaatttgcc
aagaaattggagcagcgcaaagaacgaaccttcaaatcacgctccagatccagatctcca
agacatagatctaggtcattgtcaaggcctaggtaccgttctcgatcaagaggaaggagc
ttttcaaggtcacctcgtaggtcattcacacctagaagatcatcactatctcccagaaga
tcctattcaccgaggagatattccccaagaaggtcaaggtcacccagatactctccaaga
agatactactctcctagacgatcaccaagaagatccttatctccaagacctagatatagg
tcatattcgaggtcacccgttaggagacggtctttcacacggtcaaggtcgagagataga
aggtccccatttagacgctcgctttctagaagtcctcttggtaggcgctcaccatttaga
agatcatactcaaggggaagatacactccaccaagaaggtcattatcaccatacagaagg
tcaccgcttagaaggtcaaggtctagaggtcgcagccctatagaccagtaccgtagatca
cctatgagatattcacctaaaaggaagaggtcttctcttaagaggtctcctatcagaaga
tcaaaatcacctctaaagagatctccattgagaagatcaaaatcacccctaaagagatct
cctttgagaagatcaaagtcaccattaaagagatctccattgaggagatcaaagtctcca
ctaaagagatctcctttgagaagaccaaaagaaaaaccgttaccaagggctaaatcacca
aaacaacaaagggatgccaagaaaaaaccagcacctaaacaaaaggataaggacagtaat
gacactgaaccagttcttaatgccaatatgaacaataaacaagtgaaatcggcagagcca
aacaaagaaaacattcctgctaaagcaataaaacctgttaacacaagatcaaataacatt
gttataaacattgttgacagtaccacgactgatgagaatagtgaagttgaaggaaaaagt
attaaaactgatagcaatcaaaatgaaaatgctgtgtcaaataaaagtaatgataaaact
gataaatctgctattgaatcaaaagcgaataaaaatctgggggagaatgaaaataaacaa
gtcaataaatctgaaaatgaggccaaacttaaatctaggtcgagatctaaaagtaaagaa
aaggctgggccttccgcaaaacagagtaaaccaagaaagaaaaggagtcctaaaagaaaa
gagaaatctgtgtcactgtccccagaaagggttaaaagtcccctaagaatgccttacaga
gataggtttgaaggtggtaacagagatagatttgaagggggtagaggtagaatggataga
attgaagggggtagagaaagatttgaggttggccggggaggttatgggagggaatgggat
agaagcagagatgctgatccatattttaggggcagacagaacgctggatacagaggtcgt
gatttcaggggtagaggtaggggttcagatttcaggggtggtattggagactatggagtg
cagcagcctccagacttcaggaaccaagattacaggccaccaccaccacaacaaccagga
gattttgcttcttttccaccattaccagatcctgcagcaatggcaggtccatacaacagg
aattacccacagagaggttctccaggatttcctgcaaattatggacctaacttcccatat
ccaccaccaagagatcccagagaggatcctaactggcaagggttggttagagatgaggat
attttgaagtttgagcagtataagcagatgtatgatttctatagtaacagtagaacatac
gggtttccaccagcccccatcacaagtactgtacccactgggcagactccaccacagggt
cccccgccagcaccaccaggcaccactcccatacccacaccacctgaacgagcaggctca
ccaggcaggaggaggtctgtttctcccaggagacacaggagcccaacaaggagggaagga
aaagacagaagagatagagagagagattacagggataagagaagtccagagagacgccga
gaagatcgtagtgatcgagaagaccgcagtccagatcgcaaacgcgattttacacctgaa
aagaaacatacaactgatgaaagtggcagagatgaaactagtccagagaaaaaatcaaaa
gacaatgatgaaagggaaactaaaaaagaaaggaaggcaagaagaaagaaagaaaaagca
gaaggaggggagaagaagaagaaaaagaagaaagacaaggataagactaaaactaagaaa
gacaaagctgaaaagaaagcaaagaaattgaaattggctgaaaattcagacaatgaagaa
caggtgaataaaaaatcaagaaggacacagtctcaaaatgaatcagatagtgaaaaaagt
gatactgacactgagaacaaagcaaaaacaaagacttcaaggcaaaattcagccgcaagt
gaaattgaaattaaagcgaagacggagagttccagacacaattcaacagcacaatcggat
tcttctgatcatgagaaagatgaggtgaaaaacagtgaaagaactgtgaaaaaagaagta
aaagatgacgaaagtgaggttaataaaccaggaagtgttcagaaatcggaagggacagac
tctgaaattgatgaaaagaaacattccgctaagaacttaaaacaagaacctgaggaatca
gaagttgaaaaagatgtacctgaaaagcaggagaagagacggtctattaaaagaggaaag
cctgatgcagatgcagaagaagctactgatgctaaaaaagcaaaactggaagaggatgtt
aaagaagaaagtagggaagaaaagatggacacttctggtggtgtatccccagctggttct
gaaggtttcgatgatataccccatccggaagatgagttgatgttagatccaccagagcta
tccaagtgggagaaatgggaaaaggatgatgatccatatgatctaagcccagaacccagc
aaagcaagagagaaatggaagcctggaaaacagacatttttaccaaggtcagtgatagag
aaagcagaacatgctctcgcccagaaggtgatgaagcctacaactgtcagttcagcagtt
tcagtcatacagccagctaagaaagaaatgaagtcagaaactaaggaagttgaacctgta
catgttaaaagggagaaatctccagtagttgaaccaaaacgccgagtctttatggaacca
gagaagaaaaaagatgaaaggagaataggatctaagcaacagcataatgttaaaataact
gtcactagtgatgaaaaaaggaaagttgccacagaaaatgatcttagaaataaactcagg
gaaaagaggcgtgaaagtgaacattctagagactatgatagatctagagaaagggatcgt
gatagaagtcctgagagagtgagacggaaagatagccatggttttaaagacagaagaagc
agtagagactatgataggcaagatagtaggggtgctaaaggtgatttagatagaggtaga
gccgcagggaggtctatatcgcgtaaagattctgtgatagacgattctaggtttgttcct
gattatgatgatgaaagttattcagaagatgagaattccgaagacagtagtactgacagt
tcctctgatgaggaagttgtgcataagaaacacaaacataagaagaacaagcacaaaaag
gataagaaacaaaagaagaaaaaagaaaagaaaaagaaaaaacataaaggagagaaggaa
aagaaaatgaaatcttctgttgggaaatga
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