Mercenaria mercenaria (northern quahog): 123563239
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Entry
123563239 CDS
T07835
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31-like
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123563239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmer03041
]
123563239
Spliceosome [BR:
mmer03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123563239
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Asp4
Motif
Other DBs
NCBI-GeneID:
123563239
NCBI-ProteinID:
XP_045211862
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Position
2:complement(13370427..13434888)
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AA seq
496 aa
AA seq
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MSLADELLADFEEAGDDVEEHEGDGQTMELADVDDVTMETHIVAKNSVRNIAKLRDSEEL
SEVMKKMEVYSKQKRKEAVAGPVEFDPEYQLIVQANNLTVEIDNEINVIHKFTRDNYLKR
FPELESLISDPLQYVCTVKELGNNILDNSKNNAALQEILTSATIMVVSVTASTTQGSLLT
DDEMKIVEEACDMALELSEYKRRIHEYVESRMTYIAPNLSIIVGASTAAKIMGVAGGLTN
LSKMPACNIMLLGSQKKILAGFSSTVMQPHQGILYECDLIEKSPPDLKKKAARLVSGKCA
LAARVDSCHESVDGSIGDQFRADIEGKLDKLQEPPPVKKAKALPAPIDQARKKRGGRRAR
KMKERLGLTEMRKQANRMNFGEIEEDAYQEDLGFSLGTIGKSKTGRIRGPVVDSKTKARI
SKSLQQKIAKEKQTWGGSTTVKKQVSGTASSVAFTPLQGLEIVNPQAAEKRVQEANAKYF
SSTASFVKVEKQLWHK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttagcggatgaattacttgccgattttgaagaagcaggagatgatgtggaggag
catgaaggtgacggtcagactatggaactggctgatgttgatgatgttaccatggaaacg
cacattgttgccaaaaactctgttaggaatattgcaaaacttagagacagcgaagagctg
tcagaagtgatgaaaaaaatggaagtatactccaaacagaaaagaaaggaagctgtggca
ggtccagtggaatttgatccagagtatcagctgattgttcaagccaataatctgactgtg
gaaattgacaatgaaataaatgtgatacacaaatttacaagagataattacctgaaaaga
tttcctgaactggaatcactgattagtgatcctctacagtatgtttgtactgttaaggaa
cttggaaacaacattttagacaacagtaagaataatgcagctctacaagaaatcctcaca
tccgccactataatggttgtcagtgttacagcttctacaactcaagggtcattgcttaca
gatgatgaaatgaagattgttgaagaagcctgtgatatggcattagaactgagtgaatac
aagagacgtattcatgagtatgttgaatcaagaatgacatatattgcaccaaacttatct
ataatagtgggcgcttccacagctgctaaaataatgggtgtagctggaggtttaacaaat
ttgtcaaagatgccagcatgtaacatcatgttgctcggctcacagaagaaaatactggca
ggattctcctcaacagtgatgcagccacatcaaggaatactctacgagtgtgacctcata
gaaaaatctccaccggatttaaaaaagaaagcagcacgacttgtatcaggtaaatgtgcc
ctggcagcacgagtagacagctgtcatgagagtgttgatggaagtattggcgaccagttc
cgtgcagacatagagggaaaacttgacaaactccaagaaccgccaccagtcaaaaaagcc
aaggccctgccagctcccatagatcaggccaggaaaaaaagaggtggaagaagagcaaga
aaaatgaaggaaaggcttggtctgacagaaatgagaaaacaggcaaacaggatgaacttt
ggagagattgaagaggatgcttatcaagaagatcttggattctccctgggaaccattggc
aagtcaaagacaggcagaatccggggaccagtcgttgactctaaaactaaagcaagaata
tccaaatctctacagcaaaagatagcgaaagagaagcagacgtggggaggtagtaccaca
gtgaagaaacaggtgtctggtacagcgtctagtgttgctttcacaccattacagggtctt
gagattgtcaatccccaggcagcagagaagagggtccaggaagccaatgctaaatatttc
tccagcacagcttcatttgttaaagtagaaaaacaactctggcataaatga
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