Mercenaria mercenaria (northern quahog): 123563411
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Entry
123563411 CDS
T07835
Name
(RefSeq) mutS protein homolog 4-like isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmer03036
]
123563411
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Meiosis-specific proteins
Others
123563411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
ATPase_2
nSTAND3
AAA_22
AAA_27
AAA_23
Motif
Other DBs
NCBI-GeneID:
123563411
NCBI-ProteinID:
XP_045212129
LinkDB
All DBs
Position
2:18395857..18444790
Genome browser
AA seq
947 aa
AA seq
DB search
MNLSSKRQPKYNFGLLETPKTSDSREATYQGASSSSVPGTSSQSSVPGTSFGQTPRTSSL
SSGNSHSNSTQVSGLSSSSSSKRPRYNAGNSSTGSSVSSSSTPNVRSSTSRTSNPGSSTR
TPRGFSSSGRTPGSRRTPYTGSSMTPGATPARIDRSALVAIVEGRGLARGEIGMATLDLK
RPELVLSQFSDMLTYVKTITKLQIIHPLEIILPSTACESGTMTNLSKFITDQFHNTSIST
VQRKYFNETKGLLYVKQLCVPEYSSVELEVSSKYYCLAAVAALMKYLEFIQNTIYAPASL
KIVFKGSENTTMIDVSTAKNLELLQNQRDPHSDHTLYGILNYTKTVAGARLLRSNILQPP
SDIDTITLRQDAVSELIEKPEIFYNLEAVIGRFLDIDHLLSLCVQVQKQENVKTAENKIT
NVMYLKHTLELVTPLKEALGDCENPLLMASYKVLEDPRFVLMLDKINCIIHEDARYQKGT
LNMRSQKCFAVKPNMNGLLDISRKTYTEMVDDITDLVNQMAGAYNLPLKVAYSTTRGFHI
QMYGGGAEGYTADNLPGIFMKVTKFKNTFSFTTADLIKMNGMLKYQKVLQKKFFKAYRVK
ESLHEIYMMTSIVMTELLNNIRDDIGALYKLTETVATIDMLLSFAHACTLSDFVRPEFTD
TFAVKQSRHPILEKISIEHPVPNNIYASEDSNFVVITGPNMSGKSTYLRQIALLQIMAQI
GSFVPAEYASFRIANQIFSRIGSDDDLETNSSTFMMEMKEINYIIQTVSANSLIIIDELG
RGTSVEEGVGICFSICEHLIATKAFTFFVTHFRELTMLDSLYPNVENYFFEIHRSFSIEA
NCEKVVYTHMLSKGKTEEKHYGIQLAEISTLPQSVVTNAKQLAIKIEEEKKNSEKQDKEI
CRQRAVFKLATRLVQAARSSRLDDDSLRQYVASLKKKYEEEVLSLEE
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgaacctttcgtcaaagagacaaccaaaatacaattttggtttgttagagacaccaaaa
acatccgacagtagggaggcaacttaccagggtgccagcagttcttctgtgccaggcact
agcagtcaatcttctgtgccaggcaccagctttggacaaacaccaaggacatccagttta
agttcagggaatagccacagtaacagtacacaagtatcagggttaagttctagttcatct
tccaaacgtccaagatacaatgctgggaattctagtactggtagttctgtatcatcatct
tcaacacctaatgtgagatcctctacatccagaacctctaaccctggatcatcaaccaga
actcctcgtgggttttcatcatcaggaaggacacctgggtctcggaggactccctataca
ggctccagtatgactccaggtgctactccagctagaattgacagatcagctcttgtagct
atagtcgaaggaaggggacttgcaagaggggagataggtatggcaacattggatttaaag
agacctgaactagtgctgtcccagttctcggacatgttaacatatgtaaaaaccatcaca
aaactgcagattattcaccccttagagatcattttacccagcactgcctgtgagtctggt
actatgacaaatctgtcgaaatttatcactgatcagtttcataatacgagtatttctact
gttcaaaggaaatacttcaatgaaacaaaagggctattgtatgttaaacagctgtgtgtc
cctgagtatagcagtgtagagcttgaagtttcttcaaaatactattgccttgcagcagta
gcagcattgatgaaatatctagagttcatacagaacacaatatatgctcctgcttcactc
aaaattgtcttcaagggaagtgaaaacactactatgattgatgtatctactgccaagaac
ttagagctgttgcagaaccaacgtgatcctcacagtgaccacaccctgtatggtatctta
aactatacaaaaacagttgcgggagcaagattgcttagatctaacattcttcaaccacct
tcagatatagataccatcaccctcagacaagatgctgtatcagagctaattgagaagcct
gaaatattctacaatcttgaggctgtaattggccgatttcttgacatagaccatctactg
tccttgtgtgtacaagtacaaaaacaggagaatgtgaaaactgcagagaacaagataact
aatgtgatgtacttgaaacataccctggagttagtgacacctctaaaagaagcccttggg
gattgtgaaaaccctctactcatggcatcctataaggttttagaagaccctagatttgtg
ttgatgttggacaaaataaactgtatcatacatgaagatgccaggtaccagaagggaaca
ctcaatatgagatcccagaaatgttttgctgtaaagccaaacatgaatggactccttgat
atatcgaggaaaacatacactgaaatggttgatgacataactgaccttgtgaatcagatg
gcaggtgcatacaatcttccactaaaggtagcatacagtaccactagaggctttcacata
cagatgtatggaggtggggcagagggctacactgcagacaatctgccaggcattttcatg
aaagtcacaaagtttaaaaacacatttagctttaccactgcagatcttataaagatgaat
ggtatgttgaaatatcaaaaagttcttcaaaaaaaattcttcaaggcttatagagtgaag
gaatccttgcatgagatatacatgatgacaagtatagtgatgacagagctgttaaacaat
attcgtgatgatattggagcattgtacaagttgacagagactgtagctaccattgacatg
ctgctgtcctttgcgcatgcatgtacactgtcagactttgtgagaccagaattcactgac
acatttgcagttaaacaaagcaggcatcctatcttggagaagatatctatagaacatcct
gtaccaaataacatttatgcttcagaagacagcaactttgtggtaattacaggtccgaat
atgagtggaaagtctacatacctgcgtcagattgccttgctacagatcatggcccagatt
ggttcatttgtaccagctgagtatgcctcatttagaatagccaatcagatcttctctagg
ataggtagtgatgatgaccttgaaacaaactcgtcaacatttatgatggagatgaaagag
atcaactacattattcaaacagtttctgcaaattctttgattataattgatgaacttgga
aggggaacaagtgtagaagaaggagttggcatttgtttctctatctgtgaacatcttatt
gctaccaaggccttcacattctttgtgacacattttcgagagttgacaatgcttgacagc
ttgtatccaaatgtagaaaattatttctttgagatacacagaagttttagtattgaagca
aattgtgaaaaagttgtttacacacatatgttgtcgaagggaaagacagaagaaaaacat
tatggtatacagttggctgaaatttctacactacctcagtctgtagtgacaaatgccaaa
cagcttgctataaaaatagaagaggagaaaaagaacagtgagaagcaggacaaggagatc
tgccgacagagagcagtgttcaaattggcaacaagactggttcaagcagccagaagctct
aggcttgatgatgatagtctcagacaatatgttgcctctctcaagaaaaaatatgaagag
gaagttctcagtcttgaagagtga
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