Mercenaria mercenaria (northern quahog): 123563641
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Entry
123563641 CDS
T07835
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123563641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmer03041
]
123563641
Spliceosome [BR:
mmer03041
]
Complex B
Other components
Prp19-related factors
123563641
Complex C
123563641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
RRM_occluded
zf-CCCH_2
RRM_3
zf-CCCH
RRM_YTH1
zf-CCCH_4
Nup35_RRM_2
zf-CCCH_10
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
123563641
NCBI-ProteinID:
XP_045212490
LinkDB
All DBs
Position
2:complement(31751714..31766064)
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AA seq
465 aa
AA seq
DB search
MQETQQSVGKNVVAKENGRCHQQHVKGYNNISFRREKMATAKGANTYNRQNWEESEFPIL
CQTCLGDNPYLRMMKEKYGKECKICARPFTVFRWCPGARMRFKKTEVCQTCSKIKNVCQT
CLLDLEYGLPVQVRDAALKVQDNMPKSDVNKEYYQQNMEREMAINDGVNPAGALGKAMAP
SDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRFY
GLNDPVADKLMNRYSSMPKLEPPEDKSISTLYVGGLGDKVGEKELKDYFYQYGEIRSINV
VAKQQCAFVQFTLRSSAEAASEKSFNKLIINGRRLNIKWGKSQGQQGQEKEEEKDEEKNL
EPVPGLPGALPHPPEELANNFFNLSGAPPMHPMQMRHPMPPRGPPHMMPMFIRGPPPPGV
RLPPPPPGMMPLRPPPGVMPRGQVPQMHYPSQDPNRMGATSQQNG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaacgcagcagtctgtcggaaaaaatgttgtggcgaaagaaaatggccgatgt
catcaacaacatgtgaaggggtataataatatttcgtttagaagagaaaagatggcgact
gcgaaaggagcaaacacgtacaaccgacaaaactgggaagaatcggagtttccaatactg
tgtcagacatgtttgggagacaacccttatttaagaatgatgaaagaaaaatatgggaag
gaatgcaagatttgtgcccgaccgtttaccgtgttccgttggtgcccaggagccaggatg
aggtttaagaaaacagaagtatgccagacctgttccaagataaagaatgtttgtcagact
tgtttactggatctggagtatggtttacctgttcaggtgcgagatgctgcgctgaaagta
caggacaatatgccaaaatcagatgtcaacaaagaatattaccaacaaaatatggaaagg
gagatggcaataaatgatggagtgaacccagcaggtgctctgggcaaggcaatggctcca
agtgatatgttgctgaaattggcaaggaccacaccatactacaaaagaaataggccacat
atatgctccttctgggtgaagggagaatgtaaaagaggagaggagtgcccatacagacat
gagaaaccaacagatcctgatgatccactggcagaccagaacataaaggacagattctat
gggttaaatgatccagtcgcagacaaactaatgaacagatattcttccatgcccaaacta
gaaccaccggaagacaaaagcatctccacattgtatgtgggtggtctgggggacaaggtt
ggagaaaaagagctgaaagactatttctaccagtatggagaaatccgatcaatcaatgta
gtagcaaaacagcaatgtgcatttgtacagttcacattacggtcatcagctgaggcagca
tcagaaaagtctttcaataaactcattataaatgggcggagactgaatattaagtgggga
aaatctcaaggtcagcaaggtcaagaaaaagaggaggaaaaggatgaagaaaagaatctt
gaaccagtccctggtctgcctggagctttaccacacccgccagaagagttggctaacaat
ttcttcaatttaagtggagcaccaccaatgcacccaatgcagatgagacacccaatgcca
cccagaggacctcctcatatgatgccaatgtttatcagaggccctccaccacctggtgtg
agacttccaccccctccccctggtatgatgccattgaggcccccaccaggggtcatgccc
cggggtcaagttcctcagatgcattacccctcacaggaccccaacaggatgggagccaca
tcacaacaaaatggatag
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