Mercenaria mercenaria (northern quahog): 123563742
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Entry
123563742 CDS
T07835
Name
(RefSeq) protein Tob1-like
KO
K14443
protein Tob/BTG
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123563742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123563742
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123563742
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123563742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
Motif
Other DBs
NCBI-GeneID:
123563742
NCBI-ProteinID:
XP_053391284
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All DBs
Position
2:37293296..37319790
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AA seq
457 aa
AA seq
DB search
MHVEVNVALNFVISYLYNKLPRRRVDLFGTELEKGLKKKFEGHWYPDQPVKGSGFRCVRV
NGEKIDPVIIQAASSVGLNLDEMQDYLPKELTLWIDPNEVSYRIGEKGQVKILYSDKTFE
ENNENEDREVQATNRGFNPEAQAFNPDAESFEPIDRLSASLGTLNLSQHSGGLSPSDISP
ISSSSWGGSQSTSPSGGAPFPSLSRATSPPPVAYTPKRQGAQMFTTATFAQTKFGSTKLK
SNAKRPTRLSPTEFGNFFRQKVVPNNLQYPGLTTPPRSRSLSPRDPRVEFLIDQQQRFLQ
NQHQQQLQQQFQQQQQMLHQQQLNYQLQQQQQQQQFQQQQQNRLGIPSEHHYMGSSTQHV
SGSLHEMFSGPSPLQSPVQSQMSPSSQSVLPSIQSQLFQGMNGQQSPSQSPMNVTSQSSV
NSLQISPENQKALFDGLGLNNGPYSSSSQYHHLLLAS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtggaagtgaatgtggcattaaattttgttatatcttatttgtacaataaacta
cctaggagaagagtggatttatttggtacagaacttgaaaaaggacttaaaaagaagttt
gaaggacactggtacccggatcagccagtgaaaggatctggtttccggtgtgtacgagta
aatggagagaaaatagacccagtgattatacaggcagccagttcagtgggactgaatctg
gacgaaatgcaggattacttaccaaaagaattgacactttggattgatccaaatgaggta
tcatacaggataggtgagaaaggacaggtaaagattttgtacagtgataaaacattcgag
gagaataacgagaacgaagaccgtgaagtgcaggccactaatcgcggattcaatcccgag
gctcaagcatttaatccagacgctgagtcgtttgagccaattgatagactttccgcatcc
cttgggactcttaatctgtctcaacactcgggtggattgtcaccttcagatatctcacct
atatcgtcatcctcgtggggtggcagccagtcaacatctccttccggtggcgcgccattt
ccgtcgttaagtagggcaacttctccaccacctgtggcatatacaccgaagcgccaaggt
gcccaaatgttcaccacggcaacatttgcacaaacaaaattcggatctacaaagctgaag
tcgaatgccaagcgtccaactcggctttcgccaacagaattcgggaactttttccggcaa
aaggtcgttccaaataacttgcagtatcccggattaacgaccccgcctcgttctcggtct
ttgtcaccacgtgaccctagagtagaatttctcattgaccagcagcaacgtttcttacag
aatcagcatcagcagcaacttcagcaacagtttcaacagcaacaacaaatgttgcatcaa
caacaactcaactaccaactgcagcaacaacagcagcaacagcagtttcagcagcaacaa
caaaatcgtctgggcattccatctgagcaccattacatgggcagttctactcagcatgtg
tctgggtcgcttcacgaaatgttctctggcccctcgccactccagtcccctgttcagtct
cagatgtcccctagcagtcagtcagtgcttccatccatccaatctcagctatttcaaggt
atgaatggtcagcagtctcccagtcagtcacctatgaatgtaacaagtcagtcatccgtg
aattccctccagatttcgccggaaaatcagaaagcattatttgacgggttgggtctaaat
aatggaccttactcgtcatcgagtcaatatcaccatctcttacttgccagttaa
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