Mercenaria mercenaria (northern quahog): 123564067
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Entry
123564067 CDS
T07835
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-B-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03013
Nucleocytoplasmic transport
mmer03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123564067
03015 mRNA surveillance pathway
123564067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123564067
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123564067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
123564067
NCBI-ProteinID:
XP_053392682
LinkDB
All DBs
Position
2:complement(60831145..60854251)
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AA seq
215 aa
AA seq
DB search
MPDRGRETEKTEKKKRAASSSSDSSSSSSRSRSRSSSSGSSSSGSSSSSRSSSSSSSGSS
SSGRSRSRERNRARKKSGESPKRKKRSPTPRPTKVHVGKLTRNVTKDHVQEIFSVYGSIK
HLEMPPDRAHPNFAKGFAYVDFATPEEAEKAVKHMDGGQIDGQEVTAQTVLPPRPAPRPA
RRSPPPGRRGGPPGRWRPSPPRYRDRRYVQLYYCS
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatcggggaagagaaacagagaagactgagaagaaaaagcgggcagcatcatca
agctctgatagcagcagctcgtcatcacgtagccgttccagatcatcatcttcaggtagt
agctcatccgggagctcaagctcatcaaggtcatctagttcaagttcaagcgggtcatct
agcagtggacgtagcaggagtagagagagaaatagggccaggaaaaagtctggagagtca
cctaaaaggaaaaagaggagcccaacccctcgccccacaaaggtacatgtagggaagttg
acacgtaacgtgaccaaggaccacgttcaggagatattctctgtgtatgggtcaatcaag
catttggagatgccccctgaccgggcacatccaaacttcgctaagggatttgcatatgtt
gattttgcaacaccagaagaggcagaaaaagctgtaaaacatatggatggaggtcagata
gatggacaggaagttaccgctcagactgtgctgccacctaggccagctccaagaccagca
cggcgcagtccaccacctggcaggagaggtggtcctccagggaggtggcgaccttcacct
ccgaggtacagagacagaaggtatgttcagttgtattattgtagttaa
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