Mercenaria mercenaria (northern quahog): 123564505
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Entry
123564505 CDS
T07835
Name
(RefSeq) uncharacterized protein LOC123564505 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123564505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmer03041
]
123564505
03009 Ribosome biogenesis [BR:
mmer03009
]
123564505
Enzymes [BR:
mmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123564505
Spliceosome [BR:
mmer03041
]
Complex A
U1 snRNP components
U1 related factors
123564505
Complex B
123564505
Ribosome biogenesis [BR:
mmer03009
]
Eukaryotic type
Pre-60S particles
Helicases
123564505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
GDH_ACT1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
123564505
NCBI-ProteinID:
XP_045214080
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All DBs
Position
2:complement(86869916..86885365)
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AA seq
642 aa
AA seq
DB search
MSYRDRMSGSTGRSDRKPLGLGSHGLPSSFGGSRGGRDDRYGGGRGGFGGGRGGGGGGFG
GRKEKGSQPGASLRKPKWEMDRLPKFEKNFYVEHPRVTNRSPMEIQAYCSANQITFTGSN
VAKPILSFEEACFPEYVMSNIRAQSWTQPTPIQAVGWPIALSGRDVVGIAQTGSGKTAAF
ILPSIVHINHQPYLERGDGPIALVLVPTRELAQQVQEICAEFGSTSSIRNCCVYGGAPKG
PQIRDLERGAEICIATPGRLIDFLESGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVEQ
VRPDRQTLMWSATWPKEVRQLAEEFLVDYVQMNIGALQIHANHNILQIIDVCQEAEKDMK
LMKLLEEIMQEKENKTLMFVETKRKADELQRRMKRDGWPVLCIHGDKSQPERDWVLSEFK
HSRVPLLIATDVASRGLDVEDIKFVINFDYPNSSEDYVHRIGRTGRSSHTGTAYTFFTPG
NIKQAKDLIDVLQEAKQVVNPKLLQLAESSRGFGKGRYGRGRDNYGGGSRFGGGGSRFGD
RSGGRGGSRFDSGSSRGGFGNRDSRGGGDQKGFGNTVKGFGNTTGRGRGGATGSGMGSAG
GRGGFSNQNGQMNGFGSQQNNYTNGGSYGQQQGYNSWSAMGK
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagagatagaatgtctggttctactggaagatcagatagaaagccattaggt
ttgggttcacatggtttaccatcttcttttggtggatcaagaggtggtcgtgatgacaga
tacggtgggggtcgtggtggatttggtggtggccgtggtggtggtggtggtggatttggt
ggacgaaaagagaaagggtcgcagccaggtgcgtcattgagaaaacctaaatgggagatg
gacagactgccaaaatttgaaaagaatttctatgtagaacatcccagagtgacaaacagg
tctccaatggaaatccaggcctattgtagtgccaaccaaattactttcacaggaagcaat
gttgcaaaaccaatcttaagcttcgaagaagcctgttttccagaatatgtgatgagcaat
attcgtgcccagtcctggactcagccgacacctatacaagcagttggttggcccatagct
ctctctggtagagatgttgtaggaattgcacagactggctctggaaagacagcagctttt
attctgccaagcattgtacatatcaatcaccagccatatcttgaaagaggcgatggtccc
atagctctagtccttgtaccaacaagagagttggcacaacaagtgcaagaaatctgtgca
gagttcggatctacatccagtatacggaactgttgtgtttatggtggtgcaccaaaggga
ccacagatcagagatttagaaagaggagcagaaatttgtatagcaacaccaggaagactg
atcgattttcttgaatctggaaagaccaatctacgacgcacaacatatctagtccttgac
gaagctgatcgtatgttagatatgggctttgaaccacagattagaaagatagtcgaacaa
gtcaggcctgacagacaaacacttatgtggagtgcaacatggccgaaggaggttaggcag
ttagctgaggagttccttgtagactatgtacagatgaacattggagctttacagatccat
gctaaccacaatattctacagattattgatgtgtgccaggaagcagagaaagacatgaag
ttgatgaaattgcttgaagaaatcatgcaggagaaagaaaacaagacactcatgtttgta
gaaacaaaaagaaaagctgacgagttacaacgcaggatgaaacgagatgggtggccagtg
ttgtgtatccatggtgacaagtctcagccagagagagattgggttcttagtgaattcaag
cacagtcgagttccacttttaatagctacagatgttgcttcccgtggtctagatgtggaa
gatatcaaatttgtcatcaattttgactatccgaactcctctgaagattacgtacacagg
ataggacgtacaggaagaagttcacacaccggcacagcttacacattcttcactccaggc
aatatcaaacaggccaaagatctcattgatgttttacaagaggcaaaacaagtagtcaac
cctaaattgttacaactcgcagaaagctctagaggatttggcaaaggtcgttatggaaga
ggaagagacaattacggtggtggatcaaggtttggtggtggaggatccaggtttggagac
agatccggtggtcgaggtggctccaggtttgactctggtagcagccgtggaggatttggt
aatcgtgacagcagaggtggtggtgaccagaagggattcggaaacacagtgaaaggattt
ggcaatacaactggtcggggcagaggtggtgccaccggcagtggtatgggatctgcaggc
gggcgagggggtttctctaatcagaatggacaaatgaatggctttggttcacaacagaac
aattacaccaatggtggtagctatggtcagcagcagggctacaacagctggagcgccatg
gggaaatag
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