Mercenaria mercenaria (northern quahog): 123564634
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Entry
123564634 CDS
T07835
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123564634
04121 Ubiquitin system [BR:
mmer04121
]
123564634
Transcription factors [BR:
mmer03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
123564634
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
123564634
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
hAT-like_RNase-H
zf-BED
Motif
Other DBs
NCBI-GeneID:
123564634
NCBI-ProteinID:
XP_053374207
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Position
11:80032614..80035818
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AA seq
627 aa
AA seq
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MAEKSVNADTEIFPFPGKVRSTVWAYFGFGKTKQGPPIKENLNMQSVICKLCRKLYVNKE
TKKRKLDDHVHKLIVGKALPLSLVDSPFFKNFVKELDPRYKPPSRYDVQKSLDGKMRQMT
VKLQNELPPVGGHLAITHDGWTSCATESYDTVTAHFINSNWELRSAVLQTTKVEGSHTGE
HIAERLKEMVSDWNIPVPTVVTDNAANERKAIQLLGWERFGCYGHRLNLAVKHSLDVPEV
SRILGKSRKIVTLFHQSTSLNDCLLDKQILVYSDTRNLIGHKLINDVPTRWNSTLAMLRR
LSEQIAAILAIASDDKLNINKTTCNNLRSYCLTFEEQNIVEGLIKLLSPFEKATTILCAE
NSPTMNKVLVSMAKIRNILELQSHSESATLKKVVGKLQEQLTKRTDYEEIPVMAALLNPD
TKSLSFLPVHEQEAGRRLLLDKALGLVDENGNLQVKVKKEPELEVSSTEALPELPNLPDN
IVVEQDDIVTENASTSGDNNITSDCEPVAKKIKCSDMDEWFDDVMVTRVEKTPVSAVIEQ
EIERYLASNRDADDSKLSLLQWWEKNQYVYPRLAVLAKKYLAIPASSVPSERVFSLAGSL
VNKKRSRLNPDLINKLIFLKMNMDQYW
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaaagtgtcaatgcggacaccgaaatatttccctttccaggaaaagttcgg
tcgactgtgtgggcttattttggcttcggaaaaacaaaacaaggaccacctattaaagaa
aacctcaacatgcaatctgttatttgcaaactctgccgaaaattatatgtgaacaaagaa
acgaagaaacggaagttagatgaccatgttcataaactgattgtggggaaagctctgcca
ctaagtctggttgatagtcctttcttcaaaaactttgtaaaggagcttgatcctaggtat
aagccaccaagcagatatgatgttcaaaagtctctggatggaaaaatgcgtcagatgact
gtcaagctacagaatgaattgccacctgtaggaggccatctggcaataacacatgatggt
tggaccagttgtgcgactgagagttatgacactgtaacagcccacttcatcaatagtaac
tgggaacttcgctcagctgtacttcaaactactaaagttgagggctctcacactggtgaa
catatagcagagcggctaaaagagatggtgtctgattggaatattcctgtcccaactgtg
gtaacagacaatgctgcaaatgaaaggaaggcgatacaattgttaggatgggagcgattt
ggctgttatggacatcggctgaatttggcagtgaagcattcactggatgttccagaagtc
tctcgaatacttgggaaatctcgaaagattgtaacccttttccaccaatctacaagtctc
aatgattgcctgcttgacaagcagatacttgtgtactctgatacacggaacctaatagga
cataagttaataaatgatgtcccgactaggtggaacagtactttggcaatgttacgacgg
ctctctgagcagattgctgcaattctagccattgctagtgacgataagctgaacattaat
aaaactacatgcaacaatcttaggtcatactgtcttacttttgaggaacaaaatattgtt
gaaggcttgatcaagttgttgtcaccctttgaaaaggccacaacaatactatgcgctgaa
aacagccccactatgaacaaggttctagttagcatggccaaaatcagaaacattcttgag
ttacaaagtcattcagaatcagctaccttaaaaaaagttgttggaaaactgcaagagcaa
cttacaaagagaacagattatgaagaaatacctgtcatggctgccctcctgaaccctgac
acaaagtctctgtcttttttacctgttcatgagcaagaagctggacgtcgtcttcttttg
gataaagcacttggtttagtagacgagaatggaaacttgcaagttaaagttaaaaaagaa
cctgaacttgaagtttcatccaccgaagctcttccagagttaccaaacttaccagataac
attgttgttgaacaagatgacatagttactgaaaatgcatccacttcaggtgataataat
attacatcagactgtgaaccagtagcaaagaaaataaaatgctctgacatggatgagtgg
tttgatgatgtcatggtcacacgagttgaaaagacaccagtttcagcagttattgaacaa
gaaattgaacggtaccttgcctcaaacagggatgcagatgattctaagttaagtcttctg
caatggtgggagaaaaaccagtatgtttatccaaggttggctgtcttagcaaaaaaatac
ctggccatcccagcttcctctgtccctagtgagcgtgttttcagtttagctggatctttg
gttaacaaaaagaggtcaaggttgaatcctgatttgatcaataaacttatatttcttaaa
atgaacatggaccaatactggtaa
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