Mercenaria mercenaria (northern quahog): 123564876
Help
Entry
123564876 CDS
T07835
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin_rec_like
Ank
Ank_2
Ank_4
Ank_5
Ank_3
NCD3G
EGF
EGF_2
Motif
Other DBs
NCBI-GeneID:
123564876
NCBI-ProteinID:
XP_053383713
EnsemblRapid:
LOC123564876
LinkDB
All DBs
Position
2:complement(108910557..109015008)
Genome browser
AA seq
1549 aa
AA seq
DB search
MLDYTKPLMGHTEIMELLLENGASVNLKDNKGMIPLHYAAWQGKSEPVHILLHWKSPSNE
QALGGETPLHLACQHGHFDVTNLLLLHQASPITLNKDKKSPLDLACEFGRYRVVDLLLRS
NLCSPLLVGNLNDMTEGKSTCLHLAAKNGHSDIISSLHFNFVALASFHRTICDAGKYLLG
TSCMPCARGTYKENVGDARFGNCSDCPGANTTESTGADRSALCNIQKCEAGEYLENKACK
KCELDTYSEVVYPDSSVKCIACGTINGVVYGTENTGADNSSLCKPTCLGGKQFDSATNRC
TDCPIESFKGDDDRFGSCTLCETVKPGYVSSVAGAKTSDQCDLRNCLAGEKIVGSSCVKC
EVGTYQSEPRKTTCTDCGENLSTDGEGKTSKDDCQIECGPGLQGSDSCIPCPLGTFKTVS
GYANCQDCPLDFTSNEARTECDVVFCSEGKEHTVSGSTESCKECQGGFFKDQTGNNMKCT
QCPTGSTTNGTGQTACDLLNCVPGKYKLGSKCEVCPVGTYKSDPGNQECTDCADKTTTGD
VTGAISSTQCDTVICDPGSYRQKDQKLLCTPCEIGKYQPSSGETSCLDCPNDEITLGTGK
SSMDACVPECEAGQEYNSTTKQCFLCPTGTFKVSVGNTDSCQMCPKDKTTAGPGGKAEAE
CSQNKCPPGKYFKVSADKIVECFDCEIGTYSDREMQASCTDCPNQGTTQRNGTDSEEMCI
KACAAGYGYRTDIGDCEICPKGQYNDKKGQNPNSCKQCPFGKTNSQSGSGSCNFLDIKPP
VDQRINLIVVTTVRVALDTCDTTAAIDLIKENFLKLVRNVFLMLTNQCYNGSQRYCRGTN
CDNIVFASLNPTCQQITGGKRDISHELSFELHLQNISEFITDECDGNANVTAVEVISQIL
TLYKEELTDIDLEIIFMSFENVTTVDLCGLGEELVNGICTSCPAGKYGSSVGTCTACAAN
TYQDMTGKTECKDCPDKSFTESTGSTSDSQCIPICQAGNEFDGATKTCSECKIGFFKVEE
GNDQACTACISGKTTARKGSTSADDCSETLCPPGQYFITDADTGVVSCNSCEIGKYNPNV
MADSCIQCDSGKTTQETGRKFKSDCIKICPSGSGYDTDAGDCLNCPKGQYNDGLQPRPTM
CKYCPDNTTTFKAGESSCTTVVTPVPRKLVIIRKIMIFAISIDNCGSTDSLNLILTGISS
TIKQLFIRNRNEKYNALQSFCVGDCINLSVRFPNNNPALACRLKGSGRRKRATTHEVDVE
LEFNNVSESTVDTQNNAALSTKEVINQIINNNKDELSPEQDQIEYQSDAPSVVSVLCSAG
EESVNNECVKCSAGRYGTDGVSCELCPGDTYQDESGQSSCKNCPAKTFNDAEGATSSSQC
KSWCVNNPGYCNNRGICSDTGRRTASCSCYDNYEGAQCASKKEPTSNMPAILGGAIGGGG
ALLIIILIIVGVFMRCSRDSASERKTKQYYDPEYIHNGAYDGTYDNFGYHGGQARPVAPY
PSVGYPALGYKPDQSFEEGTYSRPYKYRPSIEGDDMGRPNDDSHFVWTA
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atgttggactacaccaagcccctcatgggtcatacagagatcatggaactgttactggag
aacggagcctccgtcaacttgaaagataataaaggaatgattccactgcactatgctgcc
tggcagggaaagtctgagcccgtgcatatcttactacactggaagtcgccaagcaacgag
caagccctgggtggggaaacacctctccatttagcttgtcaacatggccattttgatgtg
acaaaccttctgctgttacaccaggccagtcctataacactgaacaaggacaagaaatca
cctctagatcttgcttgtgaatttggcagatacagggtagtagatttgttactgaggagt
aacttatgttccccactgcttgttggtaacctcaatgacatgacagagggaaaatctacg
tgccttcatctagctgccaaaaatggtcatagtgatattataagcagtttacattttaat
tttgttgctcttgccagttttcatagaactatatgtgatgcaggaaagtatttgttgggt
acgtcatgtatgccatgtgcacgaggaacatacaaagagaacgttggcgatgccaggttt
ggtaactgttcagattgtccaggggcaaatacaactgagagtaccggggcagatcgcagt
gctctttgtaatatacagaaatgtgaagctggggaataccttgagaataaagcgtgtaaa
aaatgtgaactggacacctactcagaggttgtttatccagactctagtgttaaatgcatc
gcatgtggaactatcaatggcgttgtttatggaactgaaaacacaggggcagataactct
tccctttgtaaaccaacttgtctcggagggaagcaatttgattcagcaacaaatagatgt
acagattgcccaatagaatcattcaaaggagatgatgataggtttggttcatgtacattg
tgtgagacagtgaaacctggatatgtatcaagtgttgctggagctaaaaccagtgatcag
tgcgacttacgtaattgtctagctggtgaaaagattgttggttcaagctgcgtgaaatgt
gaagttggaacataccaaagtgaaccaaggaaaacaacatgcacagattgcggagaaaac
ctcagcactgatggagaggggaaaaccagtaaggatgattgtcagattgaatgtggtcct
ggccttcaaggaagtgatagctgcataccatgcccacttggaacattcaagactgtgagt
ggatacgctaactgccaagactgtcctttagattttacatcaaatgaagcccgaacagaa
tgtgatgttgttttctgtagtgaaggtaaggagcatactgttagtggatcaacagaaagt
tgcaaggaatgtcaagggggcttcttcaaggatcagactggaaacaacatgaaatgcaca
cagtgtccaacaggttccacaacaaacggcacaggacaaacagcgtgtgatctattgaac
tgtgtaccaggaaaatacaaactaggatccaaatgtgaagtttgtccagttggaacatac
aagagtgatcctggaaaccaggagtgtactgattgcgcagataagacaaccaccggtgac
gtgactggtgcaatatcaagcacacagtgtgacactgtgatttgtgatcctggatcatac
agacaaaaagatcagaagttattatgtacaccatgtgagattggcaaataccagccttct
tctggagaaactagctgtttggactgtccaaatgatgaaataactcttggaactggaaaa
tccagtatggatgcttgtgtccccgagtgcgaggcaggtcaggaatacaactccactact
aaacaatgtttcctttgtccaactggaacattcaaggtgtctgttggtaacacagactct
tgtcaaatgtgtcccaaagacaagactacagcaggaccaggtggtaaagctgaggctgaa
tgttcacagaacaaatgtccaccaggcaagtactttaaagtttcggccgacaagattgtt
gaatgtttcgattgcgaaatagggacatacagtgaccgggagatgcaggcgagctgcaca
gattgtccaaatcaaggaacaactcaaaggaatggtactgactctgaagaaatgtgtata
aaggcttgtgctgctggatatggttacagaacagatattggtgattgtgagatctgtcca
aaaggacagtacaatgataaaaagggacagaatccaaacagctgcaagcagtgtcctttc
ggaaaaactaattctcagtctggatcaggttcatgcaattttcttgatattaaacctcct
gttgatcaacgtataaatctgatagttgtaaccacagtcagagttgccttagatacgtgt
gacactacagcagcaattgatctgatcaaggaaaactttttaaagctcgtgcgaaatgtg
ttcctaatgttaaccaatcagtgctacaatgggtcacagagatattgcagaggaacgaat
tgtgacaatattgtctttgcatcattaaatccaacttgtcaacaaataactggaggcaaa
cgggacatatctcatgaactttcattcgagcttcatttacaaaatattagtgaatttata
acagatgaatgtgatggtaatgcaaacgtcactgctgtagaagttattagccagatctta
acactttacaaagaagagttaactgacattgatttggagattatcttcatgagctttgaa
aatgtcacaacagtagacttgtgtggtttgggagaagagcttgtaaatgggatatgtaca
tcgtgtccagcaggcaagtatggatcctctgttggaacttgtacagcatgtgcagccaac
acttaccaggatatgaccggcaagacagagtgtaaagattgtccagacaaatcattcaca
gaatccacaggctctacatctgattctcagtgtataccaatctgccaggcaggaaatgag
tttgacggtgcaacaaagacctgttctgaatgcaagattggatttttcaaggtggaggaa
ggaaatgatcaggcatgcacagcgtgcatctctggtaaaaccactgcacgtaaaggttcc
acttcagctgatgattgttctgaaactctttgtccacctggacagtattttatcactgac
gcagacacaggagttgtcagctgtaactcatgtgagattggcaaatacaaccctaatgta
atggcagattcatgtatacagtgtgatagtggtaaaacaacacaagagactggcagaaaa
tttaagagtgattgcataaaaatttgtccatctggtagtgggtatgatacagatgcagga
gattgtttgaattgtccaaagggacagtacaatgatgggcttcaacctcgtccaactatg
tgtaaatattgtccagacaacaccaccacatttaaagctggagagtcttcctgcactact
gtggttacaccagttcctaggaaattagtgattatcagaaagattatgatctttgctatt
agcattgacaattgtggcagcactgattcgttaaatctgatcttaacaggcatttcaagc
actataaagcagttgtttatcagaaatcgaaatgaaaaatacaatgctttacagtccttc
tgtgttggcgactgcattaacttgtctgtaaggttcccaaataataacccagctttagcg
tgtagactgaagggctctggacgtaggaaacgagcaacaacacatgaagtggatgtagag
cttgaattcaataatgtaagtgagagtactgtggacacacagaataatgctgccttgtca
accaaagaagtcatcaatcagattattaataacaacaaagacgagctttcaccggaacaa
gaccagatagaataccaaagtgatgctccatctgtggtcagtgtactgtgcagtgctggt
gaagaatctgtaaataatgagtgtgttaaatgcagtgctggtcggtatggtacggatgga
gtgagttgtgagttgtgtccaggagacacataccaagatgagtcaggccagtcctcttgc
aagaattgtccagcaaaaacattcaatgatgctgaaggggcaaccagctcttcacagtgt
aaatcatggtgtgttaacaaccctggttactgtaacaatagaggtatatgctcagacacc
ggtcgacgtacagcatcctgtagttgttatgacaattatgagggggcacagtgtgcatct
aaaaaagaaccaacttcaaacatgccagccattttgggtggagctattggtggaggcgga
gctctactcatcataattcttataattgtgggagtattcatgagatgctcaagagattcg
gcttcagaaaggaaaacgaagcaatattatgatcctgaatatatccacaatggcgcatat
gatggaacgtatgataacttcggataccatgggggtcaggcacgtccagttgctccatac
ccatcagttggttacccagcattggggtacaagccagaccagagtttcgaagaagggaca
tatagccgaccatacaaataccgcccaagcattgagggagatgacatgggtcgaccaaat
gatgattctcactttgtatggactgcttag
DBGET
integrated database retrieval system
