Mercenaria mercenaria (northern quahog): 123564975
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Entry
123564975 CDS
T07835
Name
(RefSeq) polycystic kidney disease 2-like 1 protein isoform X1
KO
K04986
polycystin 2
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mmer03037
]
123564975
04040 Ion channels [BR:
mmer04040
]
123564975
Cilium and associated proteins [BR:
mmer03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
123564975
Ion channels [BR:
mmer04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123564975
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
EF-hand_1
Fer4_24
EF-hand_7
DUF6693
DUF4600
Motif
Other DBs
NCBI-GeneID:
123564975
NCBI-ProteinID:
XP_045214863
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All DBs
Position
2:115678374..115712236
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AA seq
905 aa
AA seq
DB search
MARPASAQSQSKFAWGDHGSARPDIQFDFGQDPGVRDDPDLSPSAMDDDSVYMSGDKNKS
SAVATTSKNQSKSCFAKIGGGIRSLWATRQTEDVKGDRELHVKTTLRELIIYIVFLVILC
IVTFGMTQTTMYYYTKVMSDLFLDKTHSGGGSFRTITSVEDFWKFAKEPLINGLYWETWY
NNDTVPTEQQGYIYYENKLLGVPRLRQLQVHSNSCHVHDDFAEVIRECYESYAESLENKQ
PFGPGVNNEDNYTAWYYRSQDELDGSSHWGKISTYSGAGYVQDLTSNKSESSGIINYLFD
KRWIRRGTRVLFIDFTVYNANINLFCVIRLTVEFPPTGGAIPHATMRTVKLIRYVTVMDY
FIMACEFILCLFILYYMVEEAIEIKKHKFSYFKSVWNILDILVIVIALVCVAFNVYRTLK
VDELLQELLDKPDQYADFEFLSYGQTQFDNAIAIAVFLAWIKIFKYISFNKTMTQLSSTL
GKCAKDLAGFAVMFFIIFLAFTQLGYLLFGTQVKDFSNFQNSFFTLFRIILGDFDFDQLE
AANRVLGPIFFMLFVFFVFFVLINMFLAIINDTYSEVKGDMANQKNEFEMGDYFKRGYEK
MLNKLNFKHDKIVDIQKALKSADINNDKQVDFDEWRQDLKTRGYADGEIEALFAKYDIDG
DRVLDEDEQKKMQADLNDQRDALKKEYDELDKIDRPESARRSASRVSFNDDSAEDSDDED
SRTKSSRSGPSQSVSYEEFTVLSRRVDRMEHSIGSIVSKIDAVLVKLEAMEKAKLKRRET
MGKILDSITESDGTSDEVKREQMERLVREELERWDSESSITPQPSGRGPSPSSSGHGGAR
NRSRPESGGNAQIEDKVIHVCQDKQFEVTAEPLKPDTLLIGEIPEPDSRTYLTVESTTAI
ADKIG
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggccagctagtgcccagtcacagtcgaagtttgcttggggcgatcatggaagt
gcaagaccggatattcaatttgactttggtcaggatcctggggttcgggatgacccagat
ttgagcccctctgcaatggatgatgactctgtgtacatgagtggcgacaagaacaaatca
tctgcggttgctactacttcaaaaaatcagtcaaagtcctgctttgctaaaattggcggt
ggaataagatcactatgggcaacccgtcagacagaggatgtgaagggagacagggaactt
catgtgaagacgactctacgagagctgatcatctacatcgtattcctggtcatcctgtgt
atcgtgacatttggtatgacccagactacgatgtactactacacgaaggtgatgagtgac
ctgttcctggacaagacccactctggcggcggatctttccgtaccataacaagtgtggag
gatttctggaagtttgcaaaggaaccacttatcaatggactgtactgggagacctggtat
aacaacgacactgtacccaccgaacaacaaggctacatctactatgaaaacaaactgctt
ggtgtaccgcgacttcggcaacttcaggtccacagcaactcttgtcacgttcatgatgac
tttgccgaggtgatccgcgaatgctacgagtcttacgctgaaagtttggaaaacaagcaa
ccgtttggtccaggtgttaataatgaagataactacacagcctggtactatcgaagtcag
gatgaacttgatgggtctagtcactggggtaaaatctctacatacagtggtgccggctat
gtacaggacttaacttcaaacaagagcgagtcgtcgggtatcatcaattacctgtttgac
aagcgttggatacgtagaggcacgagggtcctgtttatagacttcactgtgtacaatgcc
aatataaaccttttctgtgtgatcaggctgacggtagagttcccgcctacaggaggagca
atcccccatgcgacgatgagaacagtgaagttgatccgctatgttacggtgatggactat
ttcatcatggcgtgtgaatttatcctctgtctctttatcctgtactacatggttgaagaa
gctatcgagatcaagaagcacaagttctcctacttcaagagcgtctggaacatccttgac
attctcgtgattgtgattgccctcgtgtgtgttgcgtttaatgtttaccgtacgctgaaa
gtcgatgagctgctgcaggagctgctcgacaagccagatcagtatgccgactttgagttc
ctcagctacggtcagacacagtttgacaacgctattgccatcgctgtcttcttggcctgg
atcaagatcttcaagtacatcagcttcaacaagacgatgacccagctctcctccacactt
ggcaagtgtgccaaggatcttgctggctttgcagtgatgttcttcatcatattcttggcc
ttcacccagctcggctaccttctgtttggaactcaagtgaaagacttcagtaacttccag
aattccttcttcacactgttccgtatcatccttggagatttcgacttcgaccaacttgag
gctgctaaccgtgtacttggaccaatcttcttcatgctgtttgtattctttgtgttcttc
gttcttatcaacatgttcttggctatcatcaacgacacctactccgaggtgaagggagac
atggccaaccagaagaacgagttcgagatgggtgactactttaagagaggctatgagaag
atgttgaacaaactgaacttcaaacatgacaagattgttgacatccagaaagcacttaaa
tctgcggacataaacaacgacaaacaagttgactttgatgaatggcgccaggaccttaaa
actcgaggctatgctgatggcgagattgaggctttgtttgctaagtacgatattgacggt
gaccgtgtgctggacgaggatgaacagaagaaaatgcaggccgacctcaatgaccaaaga
gatgccctcaaaaaggaatatgatgaactggacaagattgaccgaccagagagtgcacgc
agatccgcaagccgtgtcagtttcaatgacgacagtgcagaagacagcgacgacgaagac
agccgcacaaaatcatcccgatcaggtccctcacagagtgtttcatacgaagaatttaca
gtgttatctcgcagagtggacagaatggaacattctattggcagtattgtttcaaagata
gacgcagttttagtaaaattagaagccatggaaaaagcaaaattaaaaagaagagaaaca
atgggtaaaatcctagacagtataacagagtccgacgggacaagtgacgaagttaaaaga
gaacaaatggaaagattagtgcgagaagagttagaaagatgggattcagagtcatctata
accccacagccaagtggtcgagggccatcccctagcagtagtgggcacggtggggccaga
aataggtcacgaccggaatctgggggaaatgcgcaaattgaggataaggttatacatgta
tgtcaggataagcagtttgaagtaactgctgaaccactcaaacctgacaccttgttaatt
ggagaaatacctgagcccgattccaggacatatttgacagtggaatctacaacagccatt
gctgacaagataggctga
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