Mercenaria mercenaria (northern quahog): 123564976
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Entry
123564976 CDS
T07835
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123564976
Membrane trafficking [BR:
mmer04131
]
Protein recycling
Others
Retriever complex
123564976
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FNIP
Motif
Other DBs
NCBI-GeneID:
123564976
NCBI-ProteinID:
XP_053393594
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All DBs
Position
2:115646409..115675548
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AA seq
985 aa
AA seq
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MTYCFTLIYVKIRYPRKRNYERERDAERLPSVPASSHPLKAITVSEIKHADKKGSASKKT
PSKGSSIVSDPLSEMGPLGATLDGLDPLSAMAAEANRTSKSRGLSFGESGTKGRADSLDD
SFEPWSAKRADILSKYTTSEKLSITTSFLSSADKEHVVIKSQSHATTGTMSDKVKNRLEQ
LDDFEEGSVQEMLNLSQQEYVSRIEDLNQALIAAWEQDQRVKALKIAIQCSKLLADVNVI
QFYPSKFVLITDILDTFGKLVYNRLRDKAQYFPPGSGVAIKLPENFTPDQVPDSAKETCR
NWFFKIASIRELIPRFYVEAAIMKCYSFLNTGEYADALRRLSQMISGMGDPLVSLYAKCF
LSRVGIAVAPSIRDHLLPMFDGFLATYPQVQGDSVQNILAIQKLEMPRYLTLFSPGLDWL
LQCIAHKASDKTLTDILEKSRKQCNSALLLNSLISAFKPQYIAARATKFIEMIKECEETG
FPKHLLFLTLGTCLAIADPPEEQKLSVLNEVWKPIMKLKTPADYIACAESWMEFIVKHFG
KREINTILNDIIKHMTPDRAFEDFYPQLQSVLAKILVHIHDFSLLFSLEKFLPFIDMFQK
ESVRVDVCKNITEAFAKFQETDTKDPVIINAMMFICKTMHDSVNALTLDDEKKSISNMIS
NFVRKISFGRDFEQQLSFYVEARSSFTNLDIVLVQLIQSVNNLSIQTRRVVNGNHSRKTG
NFVRACAAYCFITIPSLQSVFSQLQLYLLCGQVALLNQCYSQGDAFFKASVSLIPEVPRV
MEMEGKHRSSEPFLVDFISNFVSTLLVVPDNPDSSVLYLLRGLLNILQNYTWEPNSDAKV
VVYTRVLAMLSASCQETFPYHIDKVDSNDSLYASDPKYLNEVRGICSTLVEEILAHLKTL
TTPETQKRQTQLALELFNTVVNHGDIGRQNLQNLVVNLWNLVHRSNQADHKQTRMVYASL
KMKASAPDGRAFQDLLSKLPLENTN
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgacttattgttttactcttatttatgtaaaaatcaggtatccaagaaagagaaactat
gagcgagaacgagatgcagaacgactgccttcagtgccagcttcatctcatccattgaaa
gctataacagtatctgaaatcaagcatgctgataagaaaggatcagcttcaaagaagaca
ccaagcaagggttccagtattgtgtcggatcctctaagtgaaatgggcccactcggtgca
acattagatggtttggatcctttgtcagccatggcagcagaggccaacaggaccagtaag
agtagaggattgagcttcggggaaagtggaacaaaaggacgagcagactccctggatgac
tcgtttgagccatggtctgcaaaaagagcagatattctctccaaatatacaacatcagag
aaactgtcaattactacaagttttctctcttcggctgacaaagaacatgttgtgataaag
tcacagagtcatgctaccactggtacaatgtcagacaaggtcaagaataggttggaacaa
ctggatgactttgaagagggttctgttcaagagatgttaaatctgagtcagcaggagtat
gtttctcgtattgaagatctaaatcaggctctcatagctgcttgggaacaggatcagagg
gtgaaggcgctaaaaatagctatacaatgctccaagttattggctgatgtgaatgtgata
cagttctatccgagcaagtttgtccttataacagacattctcgatacatttggaaaactt
gtgtataacagactgagagataaagcccagtatttccctccagggagcggtgtagcaatt
aagttaccagagaatttcaccccagatcaggtaccagattcagcaaaggaaacctgtcgt
aactggttttttaagattgcttctatccgagagcttattccaaggttttatgtagaggca
gccatcatgaaatgctacagctttctcaatacaggggagtatgctgatgcattaagacgt
ctgtctcagatgataagtggaatgggtgacccactggtatcactatatgcaaaatgtttc
cttagtagggttggaatagctgttgctcctagcatcagggatcatcttctaccaatgttt
gatggttttctagcaacatacccacaggtacaaggagacagtgtacagaacattctggcc
atacagaaactggagatgccacgttacctgacactgttctctcctggtctcgactggttg
cttcagtgtatagctcataaggcttcagataaaacattgacagatatcctagagaaatcc
aggaaacagtgtaatagtgctctgttgctgaactcactgatatcagccttcaaaccacag
tatatagctgctagagccaccaagtttatagagatgatcaaagaatgtgaagaaactgga
tttcctaagcatttgttgttccttaccctgggtacgtgtctggctattgctgacccgcct
gaggagcagaaactgtcagttttgaatgaagtatggaaacccatcatgaaactcaaaact
cctgctgattacattgcctgtgccgagtcatggatggaatttatagttaaacattttggg
aaaagagaaatcaacacaatattgaatgacatcatcaagcatatgacccccgacagagcg
tttgaagacttctatccccagttacagtctgtgcttgctaagatactggtacacattcat
gacttctcccttctcttctcattggaaaaatttctgccgtttattgacatgttccagaaa
gaaagtgtacgtgttgatgtctgcaaaaacattactgaagcttttgcaaagttccaagag
actgatacaaaggacccagttatcattaatgctatgatgtttatttgtaaaaccatgcat
gactcggtcaatgcactcacactggacgatgaaaagaaatctattagcaacatgatatcc
aactttgtgaggaagatatcatttggtcgggactttgaacaacaactgagtttctatgtg
gaagcgaggtcatcctttaccaatcttgacattgttctggtgcagttaattcagagtgtc
aataatttatctattcaaacaagaagagttgtaaatggaaaccattcacggaaaactggc
aattttgtaagggcttgtgctgcctattgctttattacaatcccatccctacagtcagtg
ttctcacagttacaactttacctgttgtgtggacaggtggctctgctcaaccagtgttac
agtcaaggtgatgcatttttcaaggcttcagtatcattgatccccgaagttccacgtgta
atggagatggaaggaaaacacaggtcttctgaaccattcctcgttgattttatcagtaac
tttgtctctaccctgttagttgtaccagacaacccagactccagtgtgttatacctactt
agaggcctactaaatatactacagaattacacatgggaacctaattctgatgctaaggtc
gttgtttatactagagttctggcaatgttgtcagcttcttgccaggaaacatttccatat
cacattgacaaagtggattccaatgatagtttatatgcctctgatccaaaatatttaaat
gaagtacgaggtatatgttcaactcttgtggaagaaattcttgcccatttgaaaacatta
acaactccagagactcagaaacgtcagactcaactagctctggaattgttcaacacagtt
gtaaatcatggtgatataggacgacagaatctacaaaatttggtggtcaatttatggaac
ctggttcacagaagcaatcaagcggatcataaacaaacgagaatggtgtatgcatcttta
aagatgaaagcatcggctccagatggtagagcgttccaggatcttctttctaaattgcct
ttagaaaatacaaattag
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