Mercenaria mercenaria (northern quahog): 123565361
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Entry
123565361 CDS
T07835
Name
(RefSeq) chitin synthase chs-2-like
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer00520
Amino sugar and nucleotide sugar metabolism
mmer01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
123565361
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mmer01003
]
123565361
Enzymes [BR:
mmer01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
123565361
Glycosyltransferases [BR:
mmer01003
]
Polysaccharide
Structural polysaccharide
123565361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chitin_synth_2
Glyco_trans_2_3
ChitinSynthase_IV_N
Glycos_transf_2
Glyco_tranf_2_3
Glyco_transf_21
Motif
Other DBs
NCBI-GeneID:
123565361
NCBI-ProteinID:
XP_045215162
LinkDB
All DBs
Position
8:49351385..49369982
Genome browser
AA seq
1790 aa
AA seq
DB search
MSDCEYTGDKDGAHAVAEDGRTGYIQHMAIADFIQRYRDISFSKDSKVSPTQDNAVHILN
DAGLEGVFIDGNKVALQPWQGPYLQELANAIRENRSSCITQNVKCPQLLTPSEISYNESA
DDTYKQTDELQIDDHTARHAPANQSGDPNWSLKRSYIKYNRSTCNIHHSKTEGDIEEQNF
ATSNASFNLEPVDDEYDGMMSVDDHRTNETGSVEGMEIAGDRLTMNDTPVEQAQEPVEHT
DSTSMVSEWIEHNAYSNNTGFRDQTKVHNEGQVLDQRWWDRFQMMPREQTSNSAAFQTVF
KIFKVVCYIFIMVMVLGSAVVNKVCVLMMTSSITKDPLTESMWPVKTMLLISICFPYSIW
FLVYSGKSLFGSTTWPSLSLLSSVLFIELLHTLGLSLLMFRVLPLLDMMRALLVLGSIYT
VPAFLKTIFEGRDPNTGLARKCAIFFLNLGAFLIQIGSIVLFEMFQITMSPSEKLSIRNS
VMQDDLSMVVPRPELAKGYFRNEVLFELPIALFLISISYWENYVEGEFSIFGKTMNFKNW
KKHLHHARGRLYIFASIWKAVWIVAFAILLQPGFNFNLSYTSSSKANNSSVAQVEPLIQG
QGQVHPDGARLARREANRDSFNTSSTMKTHIINFITETTTASAGKNDYVGDTTKERKDNR
SNLEQNMFYFSPETMQHFEEYGVLYIQIISSTLLTYFGSTACKLCMQLLGFSLPLSLTTP
LTVAVVMLQSIYEFLPTGSFVWIGVETGSSTWVLHLAWLGVLWLSELYITSHIWFPGNGR
MENIDRLFVTPVRCGIFTDQSLILRRRRNDHDASLTPDTDDDSYDPDAEQYKADDIVPQI
YACATMWHETRAEMTNLLKSIFRLDIDHSGRYLAQKFYKIRDPDYYEFEAHIFFDDAMEL
SDDDFLVPNMFVADLMECIDDSLSSVHERQMSLGPPTRTPTPYGGRLTWKLPGGTRLITH
LKDKHKIRHKKRWSQVMYMYYLLGYRILAQPENLLTKDTIEGFRSDGEFKRVRLTEAQLR
RRRKAAHFTRSVIFNYVTDEVHTQAENTYILTLDGDVDFHPDAVRLLIDRLKTNKKVGAA
CGRIHPIGSGPLLWYQQFEYAIGHWLQKATEHVFGCVMCAPGCFSLFRGSALMDDNVART
YATRATEAGHYVQYDQGEDRWLSTLLLQQGYRIDYCAASDALTHAPETFSEFFNQRRRWG
PSTLANIVDLLGGWKATITINDNISTLYILYQFCLMISTILGPATILLMLAGAFVVVFKL
TVLESYCLALIPAIFFIVVCIYAKPNTQMTIASIMSAVYAILMTVVLVGTVGQAIEGGVT
SPNVVFMVMLVLIFFISAVMHPEEFFCVIPGALYFICLPTGYLLLTMYYLCNMNVVSWGT
RELPKRKTKEQIEEEKRIAEEHRKKREEKKKGFLGLMGLNSFFKDLGEVFKQIRTDVSHF
EKSKTDILLEELIHEIRISREKKEDTILPVHVSDIRHDVGQSKEESNINPSTKELEKEER
DQSVKHDEQNIPSDICGDGPIKDLNEKESVFWKQIIHKYLYPLNEDKMHQEKVQNDLKNL
RNNVVFGFFMSSALWIALSMQLQILQADLKDTLFFKIPRWEVSDDLAFEPLGLIFLAFFA
TILCVQFLGMFVHRWGTMLHMLSITDISCGKTFTEKDKIREIISKSMELQKLCNIENEPT
PDYDDPLQDYEDVDDDEFFESESVMTSGSSPLSTRSNNPPIYLPTAPAGVQFRHGRQEIF
NRRGNASGAALRKAFEKRFRNEKQFQKWDTDLPEDELLCGIGENGAASVV
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattgtgagtatacaggagataaagatggagctcatgcagtcgccgaggatgga
aggacaggctatattcaacatatggctatagccgactttatacaacggtaccgtgatata
tcattttccaaagacagcaaagtatcaccaacacaggacaatgctgttcatattctaaat
gacgccggccttgaaggtgttttcattgatggtaacaaggtagcacttcaaccttggcaa
ggaccgtatctacaagagcttgccaacgcaatacgtgaaaaccgttcatcttgtattaca
caaaacgttaaatgtccacaacttttaactccatcagagatatcatacaacgagagcgca
gacgacacttataaacaaacagacgaactgcagatagatgaccacactgcaagacatgca
cctgcaaaccaatctggcgacccaaactggtctttaaagcgttcatatattaaatacaac
cgtagtacatgtaacattcatcatagcaagacagaaggtgatatagaagagcaaaacttc
gcgacgagtaacgcgtcattcaatctggaacctgtggacgatgaatatgacggaatgatg
tccgtggacgatcacaggactaatgagactggcagtgtggaaggtatggagattgctggt
gacagattgacaatgaatgatacacctgtggagcaagcacaagaaccagtggaacataca
gactctaccagcatggtctcggaatggattgagcacaatgcgtattcaaacaataccgga
tttcgcgatcagacaaaagttcacaacgagggacaggttttagatcaacgctggtgggat
cggttccagatgatgccacgtgagcagacttcaaacagcgccgccttccagactgttttc
aaaatcttcaaagtcgtctgctacattttcataatggtcatggttttagggtctgcagtg
gtcaacaaagtctgcgttctaatgatgacttctagtataactaaggatcctttaacagag
tctatgtggccagtgaagacgatgttactgataagtatatgtttcccgtattccatctgg
tttttggtgtattctgggaagtctttgttcggaagtacaacatggccgtctttgtcactt
ttatcatcggtccttttcattgaattgttgcacacacttggtttgagtcttcttatgttc
cgtgtgctgcctctattagacatgatgagagctctactcgttttaggaagtatttatact
gtgcccgcttttctgaaaactatttttgaaggcagagaccccaatacaggcttagctaga
aaatgtgctattttctttttgaatcttggagcgtttcttatacaaattggaagcattgta
ctattcgaaatgtttcaaattacgatgtcgccgtccgaaaagttaagtatccgaaatagt
gttatgcaggatgatttatcaatggttgttccacgtccggaattggcgaaaggatacttc
cggaacgaggttttgtttgaactcccaatagcactttttctcatttcaatatcttactgg
gaaaattacgttgaaggagaattttctatatttggaaagacaatgaattttaaaaactgg
aagaaacacttgcatcacgcaagggggcgcctctacatctttgctagtatctggaaagca
gtttggatcgtagcatttgctattttattacaaccaggttttaacttcaatctaagttat
acaagttcttccaaagcaaataattcgagcgtcgcgcaggtagaaccattaatacaaggt
caaggtcaagttcatccagatggtgcaaggcttgctcgacgtgaggctaatagggattct
tttaacacttcttcaacgatgaaaacacacataataaactttattacagagacaacaact
gcttcagctgggaaaaacgactacgttggggacacaacaaaggaaagaaaggacaaccgt
tctaacttggaacaaaacatgttttacttctcaccagaaacaatgcaacattttgaagaa
tacggagtcctttatatacagataatatccagtaccttgcttacgtacttcggaagtacg
gcgtgcaagttatgtatgcagctactaggattttcactgccactgtctctaaccacacca
ttaactgtagcagttgtcatgctgcagagtatttacgaatttcttcccacgggttccttc
gtttggataggtgtagagaccggaagtagcacatgggttttgcatcttgcttggttagga
gtcctgtggttgtccgagctgtatatcacctcccatatttggtttcctggtaacggacgc
atggaaaacattgacagactgtttgttacgcctgttcgatgcggtatttttaccgaccag
tccctcattctccgccgccgacgaaatgatcatgacgctagcttgacgccggatactgat
gatgacagttatgacccagatgcagaacaatataaggcagacgatattgttcctcagatc
tacgcatgcgcaacaatgtggcatgaaacacgtgcagaaatgacaaatcttttaaaatct
atatttcgtctggatatagatcacagtggaaggtatctagcacagaagttctataaaata
agagacccagattattacgagttcgaagcacatatatttttcgacgacgccatggagtta
tcggacgacgactttttagtaccgaacatgtttgttgccgacctgatggagtgcatagac
gattcattgagttccgtacacgaacgtcagatgtcactgggaccaccgacaagaacaccg
acaccctatggaggacgcttgacatggaaactgcccgggggtacacggctgatcacccat
cttaaagataaacataaaataagacacaagaaaagatggtctcaggtgatgtacatgtac
tatctcctggggtaccggattcttgctcaaccggaaaatctactgaccaaggatacgatt
gagggcttccggtccgacggagagttcaaaagagtaaggcttacggaagcacagctacga
cgccgtcgaaaagcagcacatttcaccagaagtgtaatctttaactatgtgacggatgaa
gttcacacacaggcagagaacacttatattttgacgttagatggcgacgtggacttccac
ccggatgcggtacggttattgatcgacagactgaaaaccaacaagaaagttggagctgca
tgcgggcgtatacaccctatcggctcaggacctctattatggtaccagcagtttgagtat
gctattggacactggcttcagaaggcaactgagcacgtgtttggatgtgtcatgtgtgcg
cccggatgtttcagtctcttccgtggttcggctttgatggacgacaatgtagctcgaaca
tacgccaccagagcaacagaggccggccactatgtacagtatgaccaaggtgaagaccgg
tggttgagcaccctgcttctacagcaaggctatcgtattgattattgtgctgcctcagat
gctttgacgcatgcgcctgagaccttctctgaattcttcaaccagcgacgtcgctggggc
ccaagcacgctggctaacattgtagatctgctaggaggatggaaggcaacaataactata
aacgacaacattagtacgctgtacatactctatcaattttgtctaatgatatcgacaata
ctaggccctgcaacaatactgcttatgttagcgggggcatttgttgttgtatttaaactg
acggttttagaatcttattgcttagcactgatacccgccattttctttattgtcgtctgc
atctatgcgaaaccaaatacacaaatgacgatagcatcaataatgagtgccgtctatgcg
atactgatgacagttgtactggtcggcaccgtcggacaggctatagaaggtggggttacc
agtcctaacgtggtcttcatggtaatgctcgtgcttatattcttcatctcagccgtgatg
catccggaggaattcttctgtgtcattccaggcgctctttacttcatctgtcttcctaca
ggatatttgctgctgacaatgtattacttatgtaacatgaacgtggtttcatggggtact
cgtgagctcccaaaacggaaaacaaaagaacagatagaagaagaaaaacgcattgctgaa
gaacaccgaaagaaaagggaagaaaagaaaaagggattccttggattgatggggttgaat
tcgttcttcaaagatctaggagaagtctttaaacagatcaggacggacgtgtcccacttt
gagaaatcaaaaacagacattttgctggaggaactcatccatgaaatacgtataagtaga
gaaaagaaagaagacacaatattgccagtgcacgtatctgatataagacatgatgtaggt
cagtctaaagaagaatcgaatatcaatccatcaacaaaagaactagaaaaggaggaacga
gaccaatctgtgaagcatgatgaacaaaacataccttctgatatatgcggagatggtcca
ataaaggatctgaatgagaaagaaagcgtgttctggaaacaaatcattcacaagtatcta
tacccgctgaacgaggataagatgcaccaagagaaagttcagaacgatctgaaaaatttg
agaaacaatgtcgtgtttggatttttcatgtcgagcgccctctggattgctctttctatg
cagcttcagatattacaggcagaccttaaggataccttattcttcaaaattccacggtgg
gaagtttctgatgatcttgcatttgagccgcttggtctaattttccttgcattctttgct
actattttgtgtgttcagtttttgggaatgtttgtacacagatggggcacaatgctacac
atgttgtctatcacagatatttcttgcggcaaaacattcacagaaaaagacaaaatcaga
gaaataatttcaaaatcgatggagctgcagaaattatgcaatatcgaaaacgaaccaacc
cctgactatgacgacccattacaagactacgaagatgtagatgacgacgaatttttcgaa
tccgagtccgtgatgactagcggttcctctcctttgtcaacgcggtcaaataacccgcca
atatatttgccaacggcgccagcaggggtgcagtttagacacggccggcaagagattttt
aataggcgtggaaatgctagtggtgctgcactgcgtaaagcgtttgaaaaacggtttagg
aatgagaaacagttccaaaaatgggatactgatttacctgaagatgaactattgtgcggt
atcggtgaaaacggtgcagcgtccgttgtataa
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