Mercenaria mercenaria (northern quahog): 123565370
Help
Entry
123565370 CDS
T07835
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123565370
Membrane trafficking [BR:
mmer04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
123565370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_long
PPR_3
PPR
Motif
Other DBs
NCBI-GeneID:
123565370
NCBI-ProteinID:
XP_053405865
LinkDB
All DBs
Position
8:46973265..47034622
Genome browser
AA seq
1966 aa
AA seq
DB search
MDGRRVADYFVVAGLPENPQPLEEFSNEAAIKPTYKQDPITDVTVINKSLGERVPRGYQC
LDKTPNEYPADLNHGSIRGSEMYICYRRSRDKPPLTDVGVLYESKERLMAGCEVIHTTYF
GTPANVNNSNNGRTYITYRRAAENAPSDMLAVVDLCIIMENKGESPPHSYCQISKNLNRG
LVGSDVFLCYKKAMTKIDILAYKPAILDRYPKEDYPEFPLPESVAMFCLPMGASIECWSA
KAQHPYPVFSTFILTGIGWNKVYGAAITFYEEFPEDKLTDLQMRHLGLKNKHIREQYRIM
KTVHSNKSICLLSHWPFFDAFKKLLSYLYRISITGPHIVPIERHISHFMYDVPYPSPQRP
RILVQLSHDSISLSMPEDSPLPQSGASFITMLRNLGPENCMTILLYVLNEHKILIHSLRP
AVLTSVAEAVSTLIFPLQWQCPYIPLCPLGLSDVLNAPTPYIIGLDSRYFDLFDPPPDVI
CIDLDTIRIWPPDDKKNISYKLLPKKATKVLQESLHKLYDRLNQELPRQGHDEVTLDIAP
IDQDFKRKHKEMILELQIQESFLRFMACILKGYKHYLKPIENAPDLDTTNAASLFDMAGF
LKSREKANHKFFQTLLRTQLFNRFIEERSFVSDKDDSLAFFDECTEKVDETKDEPKLIEL
DDSSKSERTMFILPPEPVGLPEGKTYSYNGFPNLCSDLFLEKNKPVRSSSKNKGQTSQHS
PVARRTKQEIKTAQKLAQQYITQPPLWAKCLLSHCYSLWFMVLPAYIKKSSSVTKALSLA
YDVMKNMQRQKLKPPDELCYRVMLQLCGQYNQPVLAVKVYSEMKHAGVQPNAITYGYYNK
AVLEGKWPSSVSKGRLLWRKVRNVIIGVAKFRKAIRRRSLSVYSNSGSEYDQISHTSFDS
FLEDEKAEMKHESIMKQDSHAGKAERGTEEIESTGAASDRGYNSMTQEEAKNFSEHISEE
HKESESKHKTDIKNVLRFSFRRKHRKKESEIQEETGDDDSAFKGTDTRSIDQFRSRVGSI
VKKPSLGSNGHVDALAVGSSAGLLMVSESLVNGSLSKSMGPSITRSESVQDENKRKRHRS
AGDHLNTKTRSNSLFSNWRHRHFSGEEKGMKFSDLMAKEESELLAEAEAGSEMKGISEEI
KDSGVDLDENTEVSNLDAESEGMLFEIEENRCEEGNDENLREEKRNRVGLSEEKLESITE
VSRKGSLKSVTSSPLHVSATPVTENDPLGLFVEDQNQGTNSNKEILTPKKSPEKLREKFV
ESRPFANEVKLRKNLEKLDLGKCNIDASTNNDDNRVDKSSGITLSKIMSPVGKVQKTLFK
IERTNSFPDNLGNHGTNESEKNKSNADKTDLASLGRSSTSLYDQRTESAKPESGFFRTRS
FRRHKENFSGMLKFATGAVAHKLTEIKMSMTPSKLGSNTSLTPSYEEVDSEDETYREAAR
KRGSLDFLHRSIDRLDTSSINGVQESAPPSHPSFMDQMDRLCEAERHSIHVQFCDTQTKD
VAIEAEISSCSRCVRCRCLLYDEEIMAGWSADDSNLNTSCQFCNTKMVPHLLIYIKDHRG
KKKSKLSDDEVDDSLIQFEDSPAHRHSPMEHSYGKDSNICPSPEPLLMFGEEMEDDSSVK
SPGSSHDPWMRQSTHIPSEPTDIPSERPSHESPNLSELARLGHRRTGSECLTSATEFMFS
SSIDSLESLTFRNLRSPLSISMESESLPEHSSVSTENRKNAFNGGFSSMEPISVPYLSPL
VLRKNLESIIESEGNSALGLDTFVDEHPIIFWNLVWYFKRISATSHLPGLLLTAKSFNVS
GVSDDAEFTSDNVLIQPMWDNVRLHQEVGLPMHMAWNKCQSSTTVDALLTESQPFNRAVM
HQIITNIQCNDVLSPIKMVMNGRRRLRTKRKRFRSLYREILYLAFIACGRENIDNDAFDR
EYKMAFSRLSPGELKRLQRDDKPRSPAVQCCRRVFLELQLIKISGQ
NT seq
5901 nt
NT seq
+upstream
nt +downstream
nt
atggatggtcgtcgggttgcagattactttgtggtagctgggctaccggagaacccacag
cccctggaagagttctctaatgaggctgccattaagcccacatataaacaggacccgatt
acagatgtaactgtcatcaacaagtcactaggcgagcgagtcccacgtgggtaccagtgc
cttgacaagacacctaatgaatatccagcggatttgaatcatggcagtatacgtggaagt
gaaatgtacatttgttacagacggagtagggataaacctccgcttacagatgtgggagtt
ttgtacgagagtaaggagcgtctgatggctggctgtgaggttatacataccacatatttt
ggtacaccagctaatgtaaacaatagtaacaatgggagaacctatatcacatacagacgt
gcggcagagaacgcccctagtgacatgctcgctgtcgttgatctctgtattataatggag
aataagggtgagagcccacctcattcttattgccagattagtaagaatttgaacagaggc
ttggttggctctgatgttttcctttgctacaaaaaggcaatgacaaaaatagatatatta
gcatacaaaccagccattttggatcgttatccaaaggaagattacccagaattcccgcta
ccagagtcagtagcaatgttctgtttacctatgggtgcctccatcgagtgttggtctgcc
aaggctcaacatccatatcctgttttctcaacatttattctgactggaattggatggaat
aaggtatatggagcagctatcacattttacgaggaatttcctgaagacaagcttacagac
ttgcagatgcgacatcttggcttgaagaacaagcacatccgagaacagtatcgtataatg
aagacagtacattccaataaaagtatctgtctgttatcacattggcctttctttgatgcg
tttaagaagttactaagctatctgtacaggatatctatcacaggacctcatattgttccc
atagaaagacatatatctcattttatgtacgacgtaccctatccatcaccgcaaaggcct
agaattttagttcagttgagtcatgattcaatatcactctcaatgccagaagattcacct
ctaccacaaagtggtgcttcatttatcacaatgttgaggaacctaggtcctgagaactgt
atgacgatactgctatatgtactgaatgaacacaagatattgatacattccctcagacca
gctgtcctgacaagtgtagctgaagctgtttccactttgatatttccgctacagtggcag
tgcccttacattcctctatgtccacttggtctctcagacgtgctcaacgctccaacacca
tatattattggtttagactcaagatactttgacttatttgatcctccgccagatgtgata
tgtatagatctagacacaatcaggatctggccgccagatgataagaagaatatctcatac
aaactgctaccaaagaaggcaaccaaagttctgcaggagtctctacacaaactgtatgat
agactgaatcaggaactgccacgacagggacatgatgaagtcacgctggatatagcacct
atagatcaagatttcaagagaaaacataaagagatgatcctagagctacagattcaggag
tcattcctgaggttcatggcttgtatattgaaaggttacaaacattacctgaagccaata
gagaatgctcctgacctagatacaactaatgctgcctcactgtttgatatggcaggtttt
ttaaagagtcgggagaaagctaaccacaagtttttccagacattattaaggacacagctg
tttaatagattcatagaggagcggtcatttgtctcggacaaagacgatagtttggctttc
ttcgacgagtgtacagaaaaggttgatgaaacaaaagatgaaccaaaattaattgagctg
gatgactcttctaaaagtgagaggacaatgttcatattaccaccagagcctgtaggcttg
ccagagggaaaaacttacagttacaacggtttcccaaacctgtgttcagatttattccta
gagaagaacaagccggtaaggtcatcgtcaaagaacaaaggtcagaccagtcaacacagt
ccagttgctcgtagaacgaagcaggagatcaagacggcacagaaactggcccagcaatac
atcacacaaccaccattgtgggcaaaatgtctactcagtcactgttacagcctgtggttt
atggtgcttcctgcatacattaagaaaagctcatctgttaccaaagctctatcacttgcc
tatgatgttatgaaaaacatgcagaggcagaaactaaagcctccagatgagttgtgttac
cgtgtgatgttacagttgtgtggacagtataatcaacctgtacttgcagtaaaagtttac
tctgagatgaagcatgcaggagttcagcctaatgctatcacatatggttattataataag
gctgttctggaagggaaatggccgtcaagcgtcagtaaagggagattactgtggagaaaa
gtgagaaatgtgatcataggagtggccaaattcaggaaagccatccggcgacgaagtttg
tcagtgtactctaactctggaagtgaatacgatcaaatcagtcacactagctttgacagt
ttcctagaagatgaaaaagctgaaatgaaacacgagtcaataatgaaacaggacagtcat
gctgggaaggcagaaaggggtacagaggagattgaaagtactggggcggcttcagatcgc
ggttacaactctatgacacaggaggaagcaaagaacttttctgaacatattagtgaagaa
cacaaggaatctgaatctaaacataaaactgacattaaaaatgtgctgaggtttagtttt
agaaggaaacacagaaagaaggagtcagagatacaggaggaaactggagatgatgacagt
gccttcaagggtacagatacaagatctattgaccagtttaggtccagggtaggcagcatt
gtcaagaaaccttccttgggtagtaacggacatgtagatgcattagcagttgggtcatca
gcaggacttttgatggtcagtgagtcacttgttaatggttcattgtccaaaagcatgggt
ccttcaatcacacgatctgaaagtgtacaagatgaaaataagaggaagcggcaccgtagc
gccggtgatcatctcaacaccaaaactcgctcaaacagcctcttcagtaactggaggcat
cgccatttcagcggtgaagagaaaggaatgaagttttcagacctaatggccaaagaggaa
agtgaacttcttgctgaagctgaggctggaagcgagatgaaaggcatctcagaggaaata
aaagatagtggtgttgatttggatgaaaatacggaagtcagtaatttagatgctgaaagt
gagggaatgttgtttgaaattgaagaaaatagatgtgaagaaggaaatgatgaaaatttg
agggaagagaaacgaaatagagttgggttaagtgaagaaaaacttgaaagtattactgaa
gttagtaggaagggaagtttgaaatcagtcacgtctagtccattacatgttagtgccacc
ccagtcacagaaaatgatccgttaggtttgtttgttgaagatcagaaccaaggaactaat
tctaataaggaaatactaacaccaaagaaatcaccagaaaaattaagggaaaaatttgtt
gaaagtagaccattcgccaatgaagtgaaattgagaaaaaatcttgaaaaattagatttg
ggtaagtgcaatattgatgcatcaactaataatgatgataacagggtagataaatctagt
ggaataactctgagtaaaattatgtcacctgttggaaaagtacagaaaactttgtttaaa
atagagagaactaatagttttccagacaaccttggaaatcatggaacaaatgaaagtgaa
aaaaacaaatctaatgcagataaaactgacctagcctcgcttggaagatctagtacctca
ctgtacgatcaaagaactgagtcggctaaaccagagtcagggtttttccgaactcggagc
ttccgtcgacacaaagaaaatttcagtggtatgctcaaatttgccacaggtgctgttgca
cataaacttactgagattaagatgtctatgacaccaagtaaattggggtcaaatacgtcc
ctgactccgtcatatgaggaagtagactcggaggacgagacatatcgagaggcagcaaga
aaaagaggcagcctagatttcctacatagaagtattgatagacttgatacatccagtata
aatggtgtacaagagagcgcacctccaagtcatccgtcattcatggatcagatggatcgt
ctttgtgaggcagagcgtcacagcattcatgttcagttctgcgacacacagaccaaagac
gtagctattgaagcagaaataagcagttgttcccgttgtgtacgatgtagatgtttgtta
tatgatgaagaaattatggctgggtggagcgcagatgattccaatttaaatacaagctgc
cagttctgtaacacaaagatggttcctcacttactcatttacataaaggatcatcgagga
aagaagaaatctaaactgtcggatgatgaggtagatgacagtcttattcagtttgaggat
agtccagctcataggcactcgcccatggagcattcctacggaaaagactcgaacatctgt
ccatctcctgagccgctgttaatgttcggtgaagaaatggaggacgattcttctgtgaaa
agtccagggtcaagccacgacccgtggatgagacagtccactcacattccatcagaacca
actgatattccatcagaaagaccatcacatgaatccccaaatctgtcagaattagctagg
ttaggtcatcggagaaccggtagtgaatgcctgactagtgctacagaatttatgtttagt
tcctctatagactctttagagagtttaacattccgcaacttgaggtctccacttagtatc
tctatggagtcagaatcacttccagaacactcgtcagtctcaacagaaaacaggaaaaat
gcttttaatggtggtttctcatccatggaaccaatatctgtaccatacttgagtccactt
gtactgaggaagaaccttgaaagtatcatcgagagtgagggtaattctgcccttggtttg
gacaccttcgttgatgaacatccgattatattttggaatttggtatggtattttaagaga
atatcagcaacaagtcatttacctggtcttctgctcacagcaaaatccttcaatgtttca
ggggtatcagatgatgcagagtttaccagtgataatgtgttgatacaaccaatgtgggat
aatgtacgtcttcaccaggaggttggacttcccatgcacatggcttggaataaatgtcaa
agttcaacaacggtcgatgcactgcttacagagtcacagccattcaatagagcggtgatg
caccagatcataaccaatatacagtgtaatgatgtactcagtccaataaagatggtgatg
aatggtagacgtagattgcgaaccaaacggaaacgattccgaagtttgtacagagaaatt
ctttatctggcgtttattgcctgcggacgggaaaacattgacaatgatgcatttgataga
gagtataagatggcgttttctcgtttatcacctggtgaattgaaaagactccagcgggac
gataaaccacgatctcctgctgtccaatgttgtcgccgtgtctttttagagttacagtta
ataaaaatttcgggtcagtga
DBGET
integrated database retrieval system
