Mercenaria mercenaria (northern quahog): 123565577
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Entry
123565577 CDS
T07835
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03018
RNA degradation
mmer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123565577
09123 Folding, sorting and degradation
03018 RNA degradation
123565577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123565577
03041 Spliceosome [BR:
mmer03041
]
123565577
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123565577
mRNA degradation factors
5'-3' decay
Lsm complex
123565577
Spliceosome [BR:
mmer03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
123565577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
123565577
NCBI-ProteinID:
XP_045215380
LinkDB
All DBs
Position
19:complement(3375970..3387018)
Genome browser
AA seq
117 aa
AA seq
DB search
MTSQQPPKQQQTEKGAGDKEKKKKETILDLSKYLEKPIRVKFSGGREASGILKGYDPLLN
LVLDDTTEYLRDPDDPYKLTEDTRSLGLVVCRGTSVVLICPSDGMEAIANPFVQQDG
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgcagcaacctccaaaacaacagcagacggagaaaggagcaggtgataaagaa
aagaagaagaaggagactattcttgatttatcaaaatacctggagaaaccaatccgagtc
aagttcagtgggggaagagaagccagtggtatactgaaaggatatgatccactgttaaat
cttgtattagatgacaccacagaatatttgagagatccagatgatccgtacaaattgact
gaagacacaaggagtttaggacttgttgtgtgccgaggcacatcagttgtcttaatttgt
ccatcagacggaatggaagctatagcaaatcctttcgtgcagcaggacggatga
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