Mercenaria mercenaria (northern quahog): 123566302
Help
Entry
123566302 CDS
T07835
Name
(RefSeq) sodium channel protein 1 brain-like isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
123566302
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmer04040
]
123566302
Ion channels [BR:
mmer04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
123566302
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
GPHH
IQ_SCN5A_C
IQ
FAM176
Pro_sub2
Motif
Other DBs
NCBI-GeneID:
123566302
NCBI-ProteinID:
XP_053405996
LinkDB
All DBs
Position
8:55899777..56001707
Genome browser
AA seq
2030 aa
AA seq
DB search
MTTVEASKDDIPTTNPPADEEDSDDDEEDENLVFTVYTAESWDNQILLEKRNKEKEEENK
KNQGEAHLVDGELHFDSEEHHGPQKTRNPALVEGNTLKEDSGFPKELYGKPVEEFDKIIA
ERDKTFCVVAPRFKKEYIYRFSSTPSFYLLNVWNPFRRQCVYIATNQYFDYLIITTILTN
CIFLAMPSSDAAVTSEYVFLAIYTLEMFIKLFARGFIINSFTYLRDAWNWLDFLVICSAY
LTIVLENTSSGGGLGNLQGIRTFRVFRVLRTISIVPGLKTIVNALLRAFRMLLEVMMLIL
FCLMVFALFSLQIYMGTLRQKCVVEPPPYTATPSYSYAQYYNDHIKNSSNWYESDGEIVL
CGNVSGSQKCPDGYVCLKDIGENPNWGYTNFDHFGWAMLTSFQLMTLDFWEDTYNKVLQT
SGPWNVIFFIIVVFFGAFYLVNLMLAVVAMSYEQESEAAGKEKRKMTMFKPYAEKGTEEK
EKELKNKNRKKKKKKKEEKKDPWQELADETVKAATAAVELAYPHHHAKIPTSSTTRPLGH
PNHQSLGDKTRPHIKRNPMVKMASKDSGTGNSVESSRSNGSKDGDYLITEDGSFGGSTVD
ILKKEGQKVPPFRKPFVKQASSGMFQNKSLTQRSMVSSSGVTLTQEKILSETEADIDQGM
YDDETSEDNETKTSPGRQYVENKYPNLVIIDVGGETYENDPEKGQVVNRNPECCFNCCGG
KLMVPWLRFQQICFKIIAEPLFDLFIILCILLNTAFMAAEHHNQPEGLTQLLNVSNYVFS
GVFIVEAILKLSALTKYYFSNPWNIFDLVIVIASIVDMAVVGVDGLTVFRSFRLMRVFKL
AQSWPTMRLLLSIIMNTLGALGNLTLILCIVIYIFAVIGLQLFNDKYTEEKFGGDGVPRW
HFKDIFHSFMMIFRVLCGEWIEPLWDCMRAANEICMAVFLPTLVLGYFIVLNLFLALLLN
AFASDTLRDAKESQEDTKLKIAFKRLYDLFCCCLKKKNSDVNSVTPDREDEELGSVEEIH
EKSNGVKPANGAVNKNDVVDNAFSAKRDQYYDFNKTLEDSKKKDKVVPDDIKDQTKDTAA
ILDEDKKSEKKEKEGVRIYKVPKPKPKPKKNAKDINKVDTTLNVKPVKDADELELGAEAS
NIKEEDKDEKEEEKIIEVYDWWPLWMSRRLKKWNRCFCCWGTGDSKFWENWFMFRVYMNM
IAEHKIFEGIILFLIGASSISLAFEDVNLYSRPELESALYWLNIIFATLFGIEMLIKWCA
FGFKRYFTSFWCLLDFLIVVISVASLVAEAYGAANFSAFRSLRTLRALRPLRAISRWQGM
RIVVNALMMAIPSIVNVLVVCLVFWLIFSIMGVQFFKGEFYFCGPSADEMADPDVIPDKA
TCLANNMTWQNYDINFDNVLQGFLALFQVATFEGWMEVMSLAVDSVGVDMQPKFENSLYM
YLFFVAFIIFGAFFTLNLFIGVIIDNFNMLKKKYDGSYLDMFLTSGQRQYYNTIKKLGNK
KPQKTIKRPKNKVQGIFYDISNSSKFELCIVIFIFLNMIQMAVDHYNQTQMVTDVLAMLN
ILFVVIFTLEAIVKIIGLRWHYFTMPWNVFDFVVVILSLLGVILEDLLENINFSPTLLRV
VRVFRIGRVLRLIKAAKGIRKLMFALIISLPALFNIGMLLFLIMYIFAIVCLSTFQNLKI
TGALDEDVVNFKTFGNSFLLLFRLSTAAGWNDILIPMMISEPNCNSTHITRPDGQVVEQS
PGDCGNTFMAIAALTSYILIIFLVVINMFIAVILENFNQAHEQEEVGITEDDFEMFYTVW
ERYDPLATQFIKFEQLSHFVADLEPPLCIPKPNEIALVSFDLPIVEGDKLHCLDVLMALV
KYVLGSVEETPEFKELHDQMEVRFQDAFPTRVNTTRKTTTMMRKKEDVAAKTLQRAWRSW
KTQKQMKNIATLAIQQQNQKKTGKSKESRAKASSIRNLSIRLSSALTGFFTSSRPSSAIS
RVSVTSVNEKRQPSKSKSNNDSKTEKVRNALEMPKVSVLYSPDKDADIVL
NT seq
6093 nt
NT seq
+upstream
nt +downstream
nt
atgactacagtagaagcgtcgaaagatgatatcccgacgactaacccgccggccgacgag
gaggatagtgacgacgatgaagaagatgaaaatctcgtatttacggtgtatacggcggaa
tcttgggataatcaaattctcctcgaaaaaagaaataaagagaaagaggaagaaaataag
aaaaatcagggcgaggcccatcttgtggatggtgaattacactttgactctgaggaacat
catgggccacagaaaactagaaacccagcccttgtagaaggaaatacactgaaagaagat
tcagggttcccgaaagaattgtacggtaaacctgtcgaggaatttgacaagatcatcgca
gaaagagataagactttctgtgtggttgctccaagattcaagaaagaatacatctatcgt
ttttcatccactccgtctttctacttgttgaatgtatggaatccattccgaagacagtgt
gtgtacattgccaccaatcaatattttgactacttgattattacaaccattctcactaat
tgcatatttctcgccatgccatcctcagatgccgccgtcacttcagagtatgtttttctt
gctatttacacccttgagatgttcattaaactgtttgcacgagggttcatcatcaactcc
ttcacgtacctccgcgatgcctggaactggttggattttctggtcatctgctcagcatat
ttaacaattgttcttgaaaacacaagtagtggaggaggtctgggaaatctacagggtata
cgaacatttcgggtattcagagttcttcggaccatttcaattgtaccaggtctcaaaaca
atagtgaatgcgttactacgagctttccgaatgctgcttgaagtgatgatgctcattttg
ttctgccttatggtctttgctctgttttctctacaaatctacatgggaacattgcgacag
aagtgtgtagtagaaccacctccatatacagccacaccctcctacagctatgctcagtat
tacaacgatcacatcaaaaattcctcaaactggtatgagtctgatggtgagatagtatta
tgtggcaatgtttccggctcacagaaatgcccagatggatatgtttgtctaaaggacatt
ggagagaacccaaactggggatacacaaactttgaccactttggctgggccatgcttacc
tcatttcaactgatgactttagatttttgggaagacacttataacaaggttttacagacc
tcgggtccttggaatgttatattcttcatcattgtggttttctttggtgctttctacttg
gtcaatctcatgttagctgtggtcgcgatgtcctatgagcaggagtccgaagcagctggc
aaggaaaaacggaaaatgactatgtttaagccttatgctgaaaaagggacggaggaaaaa
gagaaagaactgaaaaataaaaatagaaagaagaaaaagaagaagaaggaagagaagaaa
gatccatggcaagaactggctgatgagacagtgaaggctgctactgctgctgtagaactg
gcctacccgcaccaccatgcaaaaatcccgacaagctcaacaacccgcccacttggccac
ccaaatcaccaatcattgggagacaagacacgcccacatataaaacgtaatcctatggta
aagatggcaagcaaagacagcggcacgggaaattctgtggaaagttcaaggtcaaacggt
agcaaggatggagattatctgataacggaggatggaagttttggtggaagtacagttgac
atcctcaagaaagaaggacagaaagtaccaccattcagaaagccatttgtgaaacaagcc
agctccggcatgtttcaaaataaatccttgacccaaaggtctatggtgtcatcatctggt
gtgaccttgacacaggaaaagatcctgagtgaaacagaagcggatattgatcagggaatg
tatgatgatgaaacttcagaggataatgaaacaaaaacaagtcctggtagacaatatgtg
gaaaacaaatacccaaatttagtcatcattgatgttggaggagaaacatatgagaatgac
ccagaaaaaggtcaggtagtcaacagaaaccctgaatgttgtttcaactgttgcgggggc
aaactgatggtaccgtggttacgattccagcagatatgcttcaagattatagccgagccc
ctgtttgatctcttcatcattctctgtatcctgctgaacacagctttcatggctgctgaa
catcataatcaaccagagggactcacacaacttctaaatgtctcaaactatgtgttttct
ggagtgtttattgttgaggcaatactaaagctgtcggcattgacaaagtattatttcagt
aatccctggaatatatttgacctggtgatcgtgattgccagtatcgtagatatggctgta
gtcggtgtagatggtcttacagtattcagatccttccgattaatgcgtgtcttcaagctc
gctcagtcctggcctacaatgaggttgttgttgtctatcattatgaacaccctgggtgcc
ctgggaaacttgacattgattctgtgcattgtcatatacatatttgctgtgattggtctg
caactcttcaatgataaatatacagaagagaaatttggtggtgatggagttcctaggtgg
cattttaaagatatatttcactccttcatgatgattttccgagtgctgtgtggagaatgg
attgaaccactgtgggactgtatgcgtgctgcaaatgaaatctgtatggctgtcttccta
ccaaccctggttctgggatatttcattgtgctgaaccttttcctggctctgttgctgaat
gcatttgcgagcgatactttacgtgatgcgaaggaaagccaggaagatacaaagctgaag
attgccttcaagcgtctctatgacttgttctgttgctgcctcaagaagaagaacagcgat
gttaattctgttactcctgacagagaagatgaagaactaggttctgttgaggaaatacat
gaaaagtcaaatggtgtgaagccagcgaatggtgctgtcaacaaaaatgatgtagtggac
aatgcattttctgcaaaacgtgatcagtattatgactttaacaaaacattagaggattct
aagaaaaaagataaagtagtacctgatgatattaaagatcagactaaagacacagcagcc
attttagatgaagacaaaaaatcagagaaaaaggaaaaagaaggtgtgcgtatttacaaa
gttccaaagccaaagccaaaaccaaaaaagaatgcaaaagatataaacaaagttgataca
acactaaatgtgaaaccagtgaaagacgcagatgaactagaactaggagctgaagcatca
aatatcaaagaggaggataaagatgaaaaagaagaagagaagattattgaagtgtatgat
tggtggcctctctggatgtctagaagattaaagaagtggaatcgttgtttctgttgttgg
ggcactggggactccaagttttgggaaaattggttcatgtttcgtgtgtacatgaatatg
atagcagaacacaagatctttgagggtataatactgttcctgattggtgccagcagtatt
tccttggcgtttgaggatgtgaacttgtattcaagaccggaactggaaagtgccctctac
tggctaaatattatttttgctacattatttggtattgaaatgttgataaaatggtgtgct
tttggtttcaaaaggtacttcacaagcttctggtgcttactcgacttcctcattgtagtg
atttcagtagctagcttggttgcggaagcatatggtgctgcaaacttctcagctttccgc
tccttgagaacattacgtgcattgagacctcttagagctatttcaagatggcaaggaatg
aggattgttgtaaatgcactgatgatggctatcccaagtattgtaaatgtacttgtggta
tgcttagtcttctggctcatattcagcatcatgggtgtacagttcttcaagggagagttt
tatttctgcgggccatctgctgatgaaatggctgatccagatgtcattccagataaagca
acttgtctcgccaataacatgacttggcaaaattatgacatcaatttcgataatgtgttg
cagggatttttggccttatttcaagtggcaacatttgaagggtggatggaggtgatgtcc
ctggctgtagacagtgttggtgtggacatgcagcccaagtttgagaactctctctatatg
tacctgttctttgttgcatttattatatttggagccttcttcacccttaacctcttcatt
ggtgtgattattgacaacttcaatatgctcaagaaaaagtacgatggaagttatctagat
atgttccttacttctggacaacgtcagtattacaacacaatcaagaaactgggcaataag
aagccacagaaaactataaaaaggccaaagaacaaagttcagggaatcttctacgatata
tccaatagcagcaagtttgagctgtgtattgtgattttcattttcttaaatatgatccaa
atggccgtggatcattacaaccagactcagatggtcacagacgtgcttgccatgctcaac
attctctttgttgtcatctttactctggaggccatcgtcaaaattattggtctccgttgg
cactacttcaccatgccatggaatgtgtttgacttcgttgtcgttatactgtctttgctg
ggtgtgattctcgaagacctgttagaaaacatcaacttcagtccaacgttactgcgagtt
gtccgagtattccgaatagggcgtgttttgcgtctgatcaaggcggcgaagggaataaga
aaactgatgtttgcgcttatcatttcactaccagccttgtttaatattggaatgctgtta
ttccttatcatgtatatatttgctattgtttgtctttcaacatttcaaaacttgaaaatc
acaggagctcttgacgaagatgtagtcaattttaaaacatttggaaatagcttcctgttg
ttgtttagactgtccactgcggcaggatggaatgatattctcattccaatgatgatcagt
gaaccaaactgtaatagcacacatataacacggccagacggccaagtggtggagcagagt
ccaggcgattgcggaaatacgtttatggcgatcgccgcacttacttcgtatatcttaatt
atattccttgtggtaattaacatgttcatagcagttattttagaaaacttcaatcaagct
cacgaacaagaggaagtcgggattactgaagatgattttgaaatgttttatactgtgtgg
gaacgctatgatccgctagccacacagtttattaaatttgaacaactgtctcactttgtt
gcggatttggaaccgcctttatgtattcctaagccaaacgaaatagcacttgtgtcattt
gatcttcctatagttgaaggtgataaattacactgtcttgacgtgctcatggctctcgtg
aaatacgtgcttggtagtgtagaagagacgccagagtttaaagaacttcatgatcaaatg
gaagttagattccaagatgctttcccaacacgtgttaatacaacacggaaaacaacgacc
atgatgaggaagaaggaagatgtggcggcaaaaacgttacagcgcgcgtggaggagctgg
aaaacacagaaacaaatgaaaaatattgccacattggcaatacaacaacaaaatcaaaag
aaaactggtaaatctaaagaatctcgtgctaaagctagttctatacgtaatctcagtata
cgcttgtcgtctgctctgaccggatttttcacctcctcgcgaccctccagtgctattagt
agagtgagtgtaaccagcgtcaacgagaagagacaacccagtaaatccaagagcaataat
gactctaaaacggaaaaggtgaggaacgcgctggaaatgccgaaagtatctgttttatac
agtcccgacaaagatgcagatattgttttgtga
DBGET
integrated database retrieval system
