Mercenaria mercenaria (northern quahog): 123566369
Help
Entry
123566369 CDS
T07835
Name
(RefSeq) AP-5 complex subunit beta-1-like isoform X1
KO
K19022
AP-5 complex subunit beta-1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123566369
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
123566369
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_N
AP5B1_barrel
TPR_IPO5
DUF496
Motif
Other DBs
NCBI-GeneID:
123566369
NCBI-ProteinID:
XP_053405922
LinkDB
All DBs
Position
8:50565682..50637288
Genome browser
AA seq
886 aa
AA seq
DB search
MSKPGNEIHPLLREIRDERTSGKIYKRFEDDYYALDLLKILYDDTVENSIKVELLINLEE
YGLLGITEDSIDQIVTSLLDIYHQCVDKGDNWPVVCQILITCTSLIVQLEQQLSDLCKAV
VKELVSIVTSRVNQPDSHRLRSCACQCLIHLEDFEPGLLVNHCDDFCQLARQERTEVFQA
YALLSAKVLSSTASVSGEKNIGLLQQGYQKTVQKQISYEPQDVRQMVAYLVENLPVYTRS
GTFRIVESLSSLVKCMPEISPMIFKPPMLHQMSTMSCVIFHTVLYLQREFKGEILSQQEE
VDLIQRLCNMTDHPSLNQLHRLLASQWAHMYQVDGKEKVVIHDSIKQKHRLIFYPSVFDP
IDCQLRKLYMTAVCGETSHDIDGVETSILLGSLGCLHKLVWHTGSGLAARCLFKALYFIY
TYHNNKSFSKDIQRFVRGLISEFAHFIPHSIDFADSINSLGIDRQVYVDTLSLLHQQVVM
ATEEQICSSFQFYLEIMKKAGAHKEIDPKPTLKFLTYLAENADIIEDSSWKLGHGILDIC
RNMIMCHGTHICFLELGDLLYYMMTCYNDTDVQDKARFYYALITGATDKKVQSVLKTSLS
DVESMTEAITSLLPGTTNKVSLAKIIPLDAPVFYWQRISVDTATQKLKTKHAEDNRTDGI
ESPLLQYEEELKNLQVSLDLKGRLKLREDSKFSKVHAVSIHVEASQTFQPIPNRHIACLT
DSGYQDVVLKVVPKLPLPLSLSCSVEFSSDSKQTYSTVIDPLYVEFSHLLMKLPWEPSDF
KNIKFSTLWDWVLNRKIEDRVGVESVKLFSISVEKFKQVHDKHLSQFLFEEQKDLSEWCY
TIFLPPCYHILLKCRSTASDSIVVSIATDLWTILSHIDTYLDDIIK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacccggaaatgaaattcacccacttttgcgagaaattagggacgaacggacc
tcaggaaagatatacaagagatttgaagatgattattatgctttggatttattaaagatc
ctttatgatgacactgtagaaaacagcatcaaagtagagttgttgataaacttggaagaa
tatggtttacttggcattacagaagacagcattgaccagattgtgacttccttgctggac
atatatcatcagtgtgtagataagggagacaactggccagtggtgtgtcagatccttatc
acctgcaccagtcttatagtacagctggaacaacagctgtctgacctctgtaaggcagtt
gtgaaagaactggtttccatagtaacgtcacgcgttaaccaaccagacagccatcgacta
cgatcctgtgcttgccaatgtctgatacacctagaggattttgagccaggacttttagtg
aatcattgtgatgatttttgccagttagcacgacaggagagaactgaagtgtttcaggcc
tacgccctcctttctgccaaagtcctttcatccactgcaagtgtttcaggtgagaagaac
attggcttattacagcaaggatatcagaaaactgttcagaaacagatatcttacgaacca
caggatgtacgtcagatggtagcttatctggttgaaaaccttccagtgtatacacgctca
gggacgtttagaattgtagaatctttgagttcacttgttaaatgtatgcctgagatatca
ccaatgatatttaagcctcccatgttacatcagatgtctactatgagctgtgtgatcttc
catactgtactctacctacagcgtgagtttaaaggtgagatcctgagtcagcaggaggaa
gttgatctaatccagagattatgtaacatgacagaccaccccagtcttaaccagctccat
agactactagcatcacagtgggctcacatgtaccaagttgatggaaaagagaaagttgtc
atacatgacagtataaaacagaagcatcggttaatcttctacccgagtgtgtttgatcct
atagactgtcaactgagaaagctgtatatgacggcagtgtgtggggaaaccagtcatgat
atagatggagtagagacttcaattctccttggcagtctggggtgtttgcacaagttggtc
tggcatacaggaagtggtcttgcagcaagatgtttatttaaagctctttacttcatttat
acttaccacaacaacaagtcattttccaaagatatacaaagatttgtgcgtgggctgata
tcagagtttgcacactttattcctcactccattgacttcgctgacagcatcaactctctt
ggtattgataggcaagtttatgttgacacattgagtttactacatcagcaagtagtcatg
gcaacagaagaacagatatgtagtagttttcagttctatctagaaataatgaagaaagcc
ggtgctcacaaagaaattgatccaaagccgacattgaagttcctaacatacctagctgag
aatgcagacattatagaggatagtagctggaaactgggccatggtatactagacatctgc
agaaatatgattatgtgccatggtacacatatatgctttctggaacttggagacctgctg
tattacatgatgacatgttataatgatacagatgttcaagataaagcaagattctactat
gcattgatcacaggagccacagacaaaaaggttcagtctgtcctgaaaacgagtctaagt
gatgttgagtccatgacagaggcaatcacatctctccttccaggtacaaccaacaaggtt
tccctagccaagattattcctcttgatgccccagttttctactggcaaaggatatctgtt
gatacagcaacacaaaaattgaaaaccaaacatgctgaggacaatagaactgatggtatt
gagagtcctttgctgcagtatgaagaagaactgaagaacctgcaggtttcacttgatctc
aaaggtcgactgaaactgagggaggactcaaaattttcaaaagttcatgcagttagtatt
catgttgaagcatctcagacatttcagcctataccaaatagacacatagcctgtttgaca
gattctggataccaagatgttgtgttgaaagttgttccaaagttgccattaccactatct
ctcagctgcagtgtggaattttccagtgatagcaaacagacttacagcacagttatagat
ccattatatgtagaattttcccatcttttaatgaagttgccatgggaaccaagtgacttt
aaaaatattaagttttcaactttatgggactgggtgctgaacagaaaaattgaagacaga
gtgggtgtagaatctgtgaaattattttccatttctgtagagaagtttaaacaggtacat
gacaagcacctgtcacagtttttatttgaagaacagaaagatttgagcgaatggtgctac
acaatatttctaccaccttgctaccacattttgctgaaatgtcgaagtacggcatcagat
agcattgttgtatccatagcaacagatttatggacaattctttctcatatagacacttat
cttgatgatatcattaaataa
DBGET
integrated database retrieval system
