Mercenaria mercenaria (northern quahog): 123566451
Help
Entry
123566451 CDS
T07835
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123566451
Enzymes [BR:
mmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123566451
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
123566451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
OB_NTP_bind
HA2_C
DEAD
AAA_22
HA2_N
nSTAND3
AAA_19
Motif
Other DBs
NCBI-GeneID:
123566451
NCBI-ProteinID:
XP_045216497
LinkDB
All DBs
Position
8:complement(45152525..45236170)
Genome browser
AA seq
1167 aa
AA seq
DB search
MSYKSSRHKYYRHEKERERSSSPTLHKRLKNESESRKQNRTSDRTSSSDREFNFLQFKYS
LNKIFFRDQYFMKRGSKEYDDFWVFVEKYQNFQKRQREKTPKPCVSGSMETDLGIPAHYD
KRYRINITLKNRDVEDFIKKGRLADAEIDKEITVERVKEFKNILMHYLDFQQKQKLAKLK
KVKTDQENLPIFQYKSDIVQLVRDNQVVIVAGDTGCGKSTQVPQYLLQAGFEKIACTQPR
RIACVSLSKRVGFETLNEYGSEVAFQVRFEKTKTSNTKILFLTEGLLLRQMTTDPHLSMY
NVIVIDEVHERHIHTDFLLGVLKCLVHHRDDVKVILMSATINIDLFSNYFEDAPVLKVPG
RLYPIEMEFCPVQRDSDTRSERLDPSPYLRIMQRIEKKYPRTERGDLLIFLSGLSEIMAV
VEAARALSQQTKTWIVLPLHSALSVEEQEKVFDIAPEGVRKCIVSTNIAETSVTIDGVRF
IVDSGKVKEMSFDPKYKMQRLQEFWISRASAEQRKGRAGRTGPGVCFRLYEEREYEAFQE
YTTPEIQRVPLDSLVLQMISMGLPDPRKFPFIEAPGVQSLENAIIFLREQGAIYQDESLT
PIGLMLSKLPVDVVIGKMLIMGSIFHMIDPVLSIAAAMSVQSPFTSKMHTDVDSMAARKS
LESDHGDPFTLLNAFDEWIQVKAEGRGTKKWCKRRGLEEQRFYEMTKLKRQFKELLQDHG
LLEKVEDQQQYLSSAERRQKHGERKRLGELRREQRKESKKRKVLKMDDEDYQISDGEDEK
DSDIKDLEFRLSHNLQQLQETSNESRSFTLRDINLLKIILCSGLYPQAAIADDCNTFKAN
SEQAFHTKSKPFVLLHPTGVFSYKPELLHPKQDSEPGKHNPADLKGLLSNKHELLTFVSI
LETNKPYLINTMRVPALQTVTLFSNNIDTNSNCTRLICDGWLEITVPDEESAEQVMSSVI
QLRATWQNLLKLRLEDTFLSMESERRISQRARKLERMLASKLTEFLSSDVRYTLRRVLAA
EMKNVYIRADRSGEEIKDVFHTSTESKPHPTKGGLIINEYLTHGCLIDDGTASAVGEFTM
TMQRHWTCPRCEVSMVVSIAERLEHEAMCQASNITATQSEDKADQDEEREMQMNPLRKSY
YCAQCEKQLQLTVTEILRHKKSHIDNT
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgagttataagagttccagacataaatactacagacatgagaaagaaagagaacgtagc
agtagcccgacattacacaaacgcttgaaaaatgaaagtgaaagtagaaaacagaaccga
acaagtgatcgtacatcatccagtgacagagaatttaactttttgcaatttaaatattct
ttaaacaagatattctttcgggaccaatattttatgaaaagaggtagcaaggaatatgat
gatttctgggtatttgttgaaaaatatcagaactttcaaaagagacagagagaaaaaact
cctaaaccctgtgtgtcaggatctatggaaacagatcttggaataccagcacactatgat
aaaagatacaggataaatataactttaaagaacagagatgttgaagatttcatcaaaaag
ggaaggcttgcagatgctgaaatagacaaggagattactgtagagagagtgaaagaattc
aaaaatatattgatgcattatcttgattttcaacagaaacagaagttagccaagttgaag
aaggtgaaaacggaccaggagaatctaccgatattccagtataagtcagatatagtacag
ttggtacgagataaccaagttgttattgtggcaggagatacaggctgtggaaagtctaca
caggtaccacagtacttacttcaggcaggctttgagaaaatagcatgtacacagccacgg
agaatagcctgtgtttctctgtccaaacgtgtaggatttgaaaccctcaatgaatatggc
tctgaagtggcatttcaggtgagatttgagaaaactaaaacgagcaatacaaagatactc
ttcttgactgaaggtctgttgttacgtcagatgaccacagatccacatctgtccatgtac
aatgttattgttattgacgaagttcatgaacgccacattcacaccgacttcctgcttggt
gtgctgaaatgtcttgtacatcaccgtgacgatgtcaaagtcatactgatgtcagccaca
ataaatatagatctattcagcaattactttgaagatgctcctgtactgaaggtaccagga
cgtctttatcctatagagatggagttttgtccagttcagcgtgacagcgacacacgttct
gagagacttgatccctcgccctatctcaggatcatgcagagaattgagaaaaagtaccct
cgtacagagcgcggtgatctgcttatatttctaagtggtttatctgagataatggctgtg
gtagaggcagcacgtgcattatcacaacaaacaaagacgtggatcgttctccctctacat
agtgccctttctgtcgaggaacaagaaaaggtatttgacattgcccctgaaggtgtcagg
aagtgtattgtgtcaacaaacattgcagagacgtcagtaactatagatggtgtaagattt
attgtagattctggaaaagttaaggagatgagttttgatcccaagtacaaaatgcagcgt
ctacaagagttctggatcagtagagccagtgctgaacagaggaagggtagagcaggtagg
acaggtccaggtgtttgtttcagattgtatgaagagagagagtatgaagcatttcaagaa
tacactaccccagagatacaacgtgtgccattagactctcttgtactgcagatgatttca
atgggtttgcctgatccacgcaaatttccattcattgaggcaccaggtgttcaaagtctg
gagaatgcaataatatttctgcgagaacaaggagctatataccaggatgagagtcttaca
cctataggcctgatgctgtctaaactacctgtcgatgttgttattggcaaaatgcttatc
atggggtcaatctttcatatgatagatcctgtgttgtccatagctgctgcaatgagtgta
cagtcacctttcaccagcaagatgcatacagatgttgattctatggctgccaggaagagt
ttagaatccgatcatggggacccatttactctacttaatgcttttgatgaatggattcag
gtaaaagcggaaggtcgaggtacaaagaaatggtgtaaaaggcgaggcttggaggaacag
aggttctatgaaatgacaaaactgaagaggcagttcaaggaattactgcaggatcatggt
ttactagagaaagtagaggatcagcagcagtatttaagcagtgccgagaggcgacaaaag
cacggtgagagaaaacgtctcggggagttgaggagagaacagagaaaagaatcaaagaag
cggaaggtcctcaaaatggatgatgaggattatcagattagtgatggcgaggacgagaaa
gattcagatatcaaagaccttgaattcagactttcccataatctacaacaactacaggaa
acatcaaatgaaagtcgaagtttcacattgagggatatcaacctgttgaagatcatttta
tgtagcggcctttatccacaagctgctatagcagacgactgtaacacattcaaggctaat
tctgagcaagccttccataccaagagtaaaccatttgtattactacatccaaccggtgta
ttttcctacaaacctgaattacttcatcccaagcaagactccgagcctggcaaacataac
ccagcagatcttaaagggcttctcagcaataaacatgaacttcttacatttgtttctatt
ctggagacaaacaagccatatctcatcaatacaatgagggtaccagcacttcagactgta
actctgttttctaataacatagacacaaacagtaattgtacacggctaatatgtgatggt
tggttagagattacagttcctgacgaggaatcagcagaacaagtcatgtccagtgtgata
cagctgagagcaacctggcaaaacctgctcaaactcagactggaagacacattcctgtca
atggaatcagaaagaagaataagtcaaagagcgcggaaacttgagagaatgttggcgagt
aaactgacagagttcctgagttctgatgtaagatatacgctacgtagagtgctggcagct
gagatgaaaaatgtctacataagagcagatagatcaggtgaagaaataaaagatgtattc
cacacaagcacagagagcaaaccacacccaactaaaggtggacttatcatcaatgagtat
ctcacacatggatgtctgatagatgatggtacagccagtgctgttggagagtttacgatg
accatgcagcgacactggacttgtcctcgatgtgaggtttccatggtagtcagtatagca
gagagactggagcatgaggcaatgtgtcaggctagtaacattacagcaacccagtctgag
gataaagcagaccaggacgaggaacgagagatgcagatgaatcctctgagaaagtcgtac
tattgtgcacaatgtgaaaaacagttacagctcacagtcactgaaatactcagacataag
aagtcacacatagataacacttga
DBGET
integrated database retrieval system
