Mercenaria mercenaria (northern quahog): 123566688
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Entry
123566688 CDS
T07835
Name
(RefSeq) uncharacterized protein LOC123566688
KO
K14407
cleavage stimulation factor subunit 2
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123566688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123566688
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
123566688
U7-dependent histone pre-mRNA processing factors
123566688
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CYYR1
Adeno_E3_CR2
Cadherin_C_2
EphA2_TM
WBP-1
GLMP
Motif
Other DBs
NCBI-GeneID:
123566688
NCBI-ProteinID:
XP_045216931
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All DBs
Position
8:complement(30212580..30223818)
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AA seq
386 aa
AA seq
DB search
MEIKRINALFAFLVILFVLNSIHYVNGGETCSHMEGSHRVQEYCEYGCCGSGNESCCSIS
TSVLLVACIVSGLVLLALVAAIIICCYKNYKDKQATRVRRLRQEQDMNAPRVPGVEPPKP
PSYVSAPPAYSEEMPESHFRPATVTGNIPYNQRFRGTTPLPRRVAHASISMTSASGRHPE
TNNPRSLRNVQIPGAIEVEAPPPYSEFARGQTPANRRRRFIQSPVPEVTENATQPNVIYS
TVEENTDIFSEVSSESGTPSRAQESRAQETSVQPSRAVTSRAVDSRATESRAVTTRAQES
RVETIRENESRAETVARVLRPSRISRIPTRVHGAQSRQLSDVQSRASSIPTRQTTNVSTN
SSTLHDSPYIRRDPSVIEENIDLAAI
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaagcgtataaatgcgttatttgcgtttctggtaattctgtttgttttaaac
agcatacattacgtaaatggtggtgaaacatgttcgcatatggaaggtagccaccgtgta
caagaatactgcgaatacgggtgttgcggatccggaaacgaatcatgttgctcgatatct
accagcgttctgcttgttgcctgtattgtgagtgggctggttctcctagcactggtggca
gctataataatatgttgctacaagaactacaaagacaagcaggcaaccagagtacgtcgt
ctgcgacaggagcaagatatgaatgctcccagagttccaggagttgaacccccaaagcca
ccatcatacgtttccgcaccaccagcctacagtgaagaaatgcccgaatcccacttccgc
ccggcaacagtgaccggtaacattccgtacaatcagaggttcagaggaaccacacctctg
ccaaggagagttgcacatgcgtctattagtatgactagcgcttccggcagacatccggag
acaaacaatcctcgttctttgcgcaatgtacaaattcccggggcaatcgaagttgaggcc
cctcctccgtattcagaattcgctcgcggccagacaccagcgaacagaaggaggagattc
attcaatcgccagtaccggaagtcactgaaaacgcaactcaaccaaacgttatatatagt
actgtagaggaaaatacagatatattttctgaagtttctagtgaatcaggaacgccatca
cgtgctcaagagtcacgtgcacaagaaacttctgttcagccgtcacgagcggttacatca
cgtgccgtagattctagagcaaccgaatctcgtgctgttacaacacgtgctcaagagtcg
cgtgtagaaactatacgagaaaatgaatcacgcgctgaaacagtagcacgtgttttacga
ccatcgcgaatatcgcgcattccaacacgtgtacatggcgcacagtctagacaattaagt
gacgtgcagtcacgtgcttcctctattccaacacgtcaaactacaaatgtttctacaaac
agttctactctgcatgactccccgtatataagaagggatcctagtgttattgaagagaac
atagatttggctgcgatttag
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