Mercenaria mercenaria (northern quahog): 128550240
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Entry
128550240 CDS
T07835
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04140
Autophagy - animal
mmer04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128550240
04148 Efferocytosis
128550240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
128550240
Membrane trafficking [BR:
mmer04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
128550240
Hops complex
128550240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-RING_5
zf-RING_11
zf-C3HC4_2
PspA_IM30
zf-C3H2C3
zf_RING_Vps8_fungal
zf-RING_Vps41
zf-rbx1
ACBP4_C
zf-RING_16
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
128550240
NCBI-ProteinID:
XP_053384837
LinkDB
All DBs
Position
17:complement(4942612..4981375)
Genome browser
AA seq
978 aa
AA seq
DB search
MASILDQYENAQASYTMPTSRSIPEPLGPGFIDARFNDEETPIFARKKINFKPDEPITHL
VVCNNFLVMAMTHGVLMRLDLDHADEHEKVEIFKKGEERVHKIFLDPTGRHLIISLESTE
NLYLSRNSKKPKLIVKLKGHHIDSVGWNWQNANDNTTGAILLGTSKGCIFETELVANDDS
KFWQGNLDQYLKQLFSLKGSHGEPITGIEFDRMPSESMTEYQYYILVTTPGKLYQFLGCV
SKTTEPPMFQQLFQQFEDQQNIQYQELPGDFGYSELRLFFPKFREAARKFAWMTGPGVYY
GDIDTSGKLGPYSVTSNQMLMRYPKESDDRSVNNPFSMVLTEFHTLLLFSDRLKAFCLLN
EQQIYDELFTDRFGKLIGLWKDPIKGTIWVFTSQNVFKYKVTKEDRDVWQMYLDKGEFEL
AKEYCRDNIAHKDKVLTRQAEYLFNGKRYLESAEMYAQTQNSFEEVALKFIRLDDKDALR
KLLHKKLESLRPQDKTQMTMLVTWLIEIYLNQLGELKEQQLESSPRFKTLQEEFQTFLKQ
TRTKECVVHNKHVVYDLISSHGDVVDLVFFAHLMQDYEKVISHHIQYDNYRGALEVLTKQ
SDMKLYYKFSPLLIQYIPKDTVKAWKRQGKQLDPKRLIPALVQYDHKKYKEQGSEVITYL
ESCVNELKNRDQAIHNYLLSLYAQLKPENLLGYLQDQDQEEVDGLCYDPKYALRLCLEYG
RNRERVHIYSLMKLYEEAVDLALTFDVELAKTEANKPDEDDVELRKKLWLRIARHVVEKE
KDVKRAMDFLHECDLLKIEDILPFFPDFVTIDHFKDAIVSSLDDYNRHIETLKEEMDEAT
GSAEEIRKEIQAFRNKYAQVKALDKCSKCGFPLMTRAFYLFPCQHKFHSDCLIEEILPNL
PGKRGNRVKDLQKKLAERDDSRQSVIGKQDPNLIASKQTVKAELDDLVASECIYCGHYMI
NSIDKPFIDEDEDNQGWL
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggcatccatcctagatcagtatgagaatgcacaggcctcgtatacgatgccaacttct
cgcagtattcctgagcctcttgggccaggatttattgatgccagatttaatgatgaagag
acaccaatcttcgcaagaaagaaaattaacttcaaacccgatgagccaattactcacctt
gttgtgtgtaacaacttcctggttatggccatgacacatggggttttgatgagacttgat
cttgatcacgccgacgaacatgaaaaggtagagatatttaagaaaggagaggagagagtc
cataagatatttttggatccgactggcagacatcttatcatcagtctagaatcaacagaa
aatctttacttgtcaagaaactcaaagaaaccaaaactaattgttaagctaaagggtcat
catatagatagtgtgggatggaattggcagaatgccaatgataacactacaggtgctata
cttttaggaaccagcaaaggttgtatatttgagacagagttagtggctaatgatgacagt
aaattttggcaaggaaaccttgatcagtacctaaaacagctgtttagcctgaaaggatct
cacggtgagcctataactggtatagagtttgacagaatgccgtccgagtccatgacagaa
taccagtactatattctagtcactacaccaggaaaattgtaccagtttttaggatgtgtt
tccaagacaacagaaccaccaatgtttcaacaactttttcaacagtttgaagatcaacaa
aacatacaataccaagaactacctggtgacttcggatacagcgaactgcgtttattcttt
ccaaaattccgagaagctgccagaaaatttgcctggatgacaggtcctggtgtatactat
ggtgatatagatacaagtggtaaacttggaccgtactctgtaaccagtaaccagatgttg
atgcggtatcccaaagagtcagatgatagatctgttaacaatccattctctatggtgctt
acagaattccatactttactgctgttttctgacaggttaaaagcattttgcctgttgaat
gaacagcagatctatgatgaactttttactgatagatttggtaagctgattggactttgg
aaggatccaattaaaggaacaatatgggtgtttacatcacagaatgttttcaaatataag
gttactaaagaagatagggatgtgtggcagatgtacctggacaaaggcgaatttgaacta
gcaaaagaatattgtagggataatatagcacacaaggataaagtgctcaccagacaggca
gaatatctgtttaatgggaaaaggtatctagaaagcgcagaaatgtatgctcaaactcag
aactcatttgaagaagtggcgttaaagtttattcgtctggatgacaaagatgctttgaga
aagttactccacaaaaaattagagtccttaaggccacaggacaagacacagatgacaatg
ttggtcacatggttgatagagatttacctaaaccagcttggtgaattgaaggaacagcaa
ctggaatctagtccccgattcaaaactctacaagaagaattccaaacctttcttaaacaa
actagaacaaaggagtgtgttgtacataacaaacatgtggtatatgatcttatatccagt
catggagatgtggtagatttagttttcttcgcacatctcatgcaagattatgagaaggta
atcagccaccatatacagtatgacaattatagaggtgctcttgaggtgctcactaaacag
agtgatatgaaactctattacaagttttcaccgctgttgatacagtacattccaaaagat
actgtgaaagcgtggaaacgtcaggggaaacaacttgacccaaagcgtctcattccagca
ttagtgcaatacgaccataaaaaatacaaagaacagggcagtgaagtaataacatattta
gagtcctgtgtaaatgagttaaagaacagggaccaggccatacacaactatttactgtct
ctgtatgcacagctgaagccagaaaatctattaggttatcttcaggaccaagaccaggag
gaggtagatggtctgtgttatgacccgaaatatgcactacggttgtgtttggagtatggt
cgaaatagagagcgtgtacatatttactccctgatgaagctgtatgaagaagctgtggat
cttgcactaacttttgatgttgaacttgccaaaacagaggcaaacaaaccagatgaagat
gatgtagaactaaggaaaaagctgtggcttagaatagctcggcatgtggttgaaaaagag
aaagatgtgaagagagccatggattttctgcatgaatgtgatctactcaagatagaagat
atcctgccattctttccagacttcgtaaccatcgaccattttaaggatgctatagtatca
tcattagatgactacaatcgccatattgaaaccctgaaagaagagatggacgaagcaaca
ggtagtgccgaggaaatacgcaaggaaatacaggcatttagaaacaagtatgcacaagtg
aaagctttagacaaatgttcaaaatgtggatttccactgatgacacgtgcattctacctg
tttccatgccaacacaagtttcactcagactgtctcatagaagagattttaccaaattta
cctggaaagcgaggtaaccgtgtaaaggatttacagaagaagctggcagagagggatgat
tctagacagagtgtgataggaaaacaggatcctaaccttatagcatctaaacaaactgtc
aaggcagaactggatgaccttgtagcctcagaatgtatctactgtggacattacatgatc
aacagcatagacaaaccatttattgacgaagacgaggataaccagggttggctctga
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