Mercenaria mercenaria (northern quahog): 128550525
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Entry
128550525 CDS
T07835
Name
(RefSeq) nephrocystin-3-like
KO
K19360
nephrocystin-3
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mmer03037
]
128550525
Cilium and associated proteins [BR:
mmer03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
128550525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
TPR_10
NPHP3
TPR_1
NPHP3_hel
TPR_7
TPR_2
TPR_8
TPR_16
TPR_MalT
TPR_19
TPR_14
NPHP3_N
TPR_11
DUF2225
ANAPC3
14-3-3
AAA_16
Flu_B_M2
BTBD16_C
Motif
Other DBs
NCBI-GeneID:
128550525
NCBI-ProteinID:
XP_053385710
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All DBs
Position
18:complement(25441611..25499641)
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AA seq
1158 aa
AA seq
DB search
MGNGASFLRSQDDDDILGTDLDGSSKGVIKRIPIEMKPRGKLGNKITNSVLRKPKGGSLR
SALSIDLENPEVERIRREYEIYRLNTENEIQNTSREKTKLETDNKRLRAELTVLQRTCNN
MRQERDAAYEEKLQALARAAAFEHDRDKVQRVFKIFRETKESEIQNLLRAKRELENKLSK
VAHGYLPEDTDTTSRTGIDSNSSPGDWWTNVESESSMGSTVQLHQTTLRGPEFASSMMEF
DGPFTNVNKEDWSSALATLNQIVPIIPEQSLSCALRLYISAPKDAQPEVDMFMKEYRPKL
SSLCNKEGRSLVTIHLFYDEQESQNNLDLQLKCRKHHADKSSIFLAFLGDNSNRFTAVEY
KSGHLDHPGNRTAIFCFREIKGTKPNLETRELRNQVRDSGSAKIIDGYPTAVKGAELAYK
ELEKVIGIELGSDNKKTEDEEFEVREGDITEVDGVFDANYNYEQMEAFNYAVKSSCELGF
EKHYERLNAHVLSAGPLPPLLILSPSGAGRSLLLCKWIQLQIEKAPGSVVLYHFVGADNS
VSADPVVMIRRITAQLMQQVTSPPSLTFDPTRLVEEFPRWLEKISSRTNGGVILVLDSID
RFHQAETHLKWLLDPLPVDARVIVSAHEDTCPQSWRSWPTLQVEPLSNKNVKELLRAELV
TLGASLNNEDETKVLTHCRNNPTCIPLYVMVLSRHIADCSKSESKVTKHLDALLTSSDCV
GLYIKVLELIKSDIETQETRGFTRNVLRYLYVSRSGLSENELIDLIPGLTWSFLAPFCYL
MHEHLLLKYQGGLLLFAHEQVIKAVHDFCFGKDEQKVISQIRQDLIQHFQSQMSGTKASC
RVSEELPWLLCQEGDKDDLKSCLLDMFVFQKICARHDQADPLRKKAMSIRRGARTPRSVT
PRVQGMEPLRKRALQLEGLCMGPDSADLARTLNEIGVLHYLQNDFDNAESFFKRSLEMRE
NVLGPDHLDLSQSLNNLAALYNDRKLHSKAEPLYERTLKIRMKNLNSDHPSIASVIKHLA
LLYRKQGKYEKAEPLYVQAVEIREKSFGPNHPSVATALVNLAVLYSQQNKHNEAEPLYTR
ALKIYEDSLGPHHPRVAETLRNLAVLKYDQKDFETAAKMYKRATEIKENDGSYAGKDLIS
RRSSSGETNSTVKNLLHP
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggggaatggtgcctcatttctacgctcccaagacgatgacgacattcttgggacagat
ctggatggcagtagtaaaggggtcattaaaaggatcccgattgagatgaagcctagagga
aaactcggaaacaagataaccaattctgttctcagaaaacctaaaggtggaagtcttagg
tcggcactatccatagatttagaaaatcccgaggtggaacgcattcgtcgagaatatgag
atatatcgtctgaacactgagaatgaaatacagaatacatcgagagagaagacaaaactg
gaaactgataataaacgactgcgagccgaactgacagttttacagagaacatgtaacaac
atgcgacaagaacgtgatgccgcttatgaagagaagcttcaagctttggcaagggcggca
gctttcgaacatgatcgtgataaagttcagagggtttttaagatatttcgagagacgaag
gaaagtgagattcagaatcttctgcgagcaaaaagagaactagagaacaaattgagcaag
gttgcccatggttaccttccagaagatacagatactacctcaagaactggcattgatagt
aacagtagtcccggagactggtggaccaatgtggaatcagaatcatcgatgggtagtacg
gtacagttacaccagaccaccctgcgtggaccagagtttgctagcagtatgatggagttt
gatggaccatttaccaacgttaacaaagaagattggtcgtctgctttagccacgttaaac
cagattgtgcctataattccggagcagtcactgagctgtgctctccggctgtacatatca
gcacctaaagatgcacagccagaggtggatatgtttatgaaggagtacagaccaaagttg
agctcactgtgtaataaagaaggaagaagccttgttactatacatctgttctatgatgaa
caggaatcacagaataatctggatttgcagttgaaatgcagaaagcaccatgctgacaag
tcctcaatatttctggctttcctgggagataactctaacagatttactgctgtagaatac
aagtctggacatctagatcaccctggtaacagaacagccattttctgctttagagaaatc
aaagggacaaaacctaatttggaaaccagggagttgaggaaccaggtccgagacagtggt
agtgccaaaattatagacggttatccaacggctgttaaaggggcggagcttgcttacaag
gagttggagaaggtcatcggaattgagttgggatcagataataagaagacagaagatgaa
gagtttgaggtacgagaaggagatattactgaggttgacggagtttttgatgctaactat
aactatgaacagatggaagccttcaattatgctgtcaaatctagttgtgaacttggcttt
gaaaagcactatgagagattaaacgcccatgtattatctgctggaccattaccccccctg
ctgatactgagcccttcaggggctggaaggtccctgcttctctgtaaatggatacagtta
cagatagagaaagctccaggcagtgtagtgttgtatcattttgtaggggcagataactct
gtatcagctgatcctgttgtcatgatcagaaggattacagcacagcttatgcagcaagtg
acctcacctccgtctttgactttcgaccctacaagacttgtagaggagtttccaagatgg
ttggagaagatctcatctcgaacaaatggaggtgttatattggtgctagactccattgac
agatttcatcaagcagaaacccatctgaagtggttgttggacccactacctgtagatgcc
agggtgatagtgtctgcacatgaagatacatgcccacagtcatggaggtcttggccaaca
cttcaagtagaaccacttagcaacaagaatgttaaagaacttttacgagcagagttggtt
accctgggagccagtctgaacaatgaggatgagactaaagtattaacccactgtagaaat
aaccctacctgtatacctctctatgtaatggtgctgtccaggcatattgctgactgttca
aagagtgaatcaaaagtaacgaagcatttggatgccttgttaacctcgtctgattgtgta
ggactgtatataaaggtgctggaactaatcaaaagtgacatagagactcaggaaactagg
ggatttaccagaaatgttttgagatacttgtatgtaagtcgaagtggactcagtgaaaat
gaattgattgatttaattcctgggttgacatggagtttccttgctcctttctgctacttg
atgcatgaacatttgctgctaaagtatcaagggggactactgttgtttgctcatgagcag
gttatcaaggcagtacatgatttctgttttggaaaggatgaacagaaagtgatctcacaa
atcagacaagatctcattcaacattttcagtctcagatgagtggaacaaaggccagttgt
cgagtgtccgaagagttgccatggttactatgccaggagggtgacaaggatgatttgaaa
tcctgtttattagatatgtttgtctttcagaagatatgtgcaagacatgaccaggctgat
cctcttaggaagaaagcaatgtccatcaggagaggtgccaggacacctagatctgttact
ccgcgggtacagggaatggagcctctgcgtaaacgtgccctgcagctagaggggctgtgt
atgggtcctgactctgcagacctggccagaacactcaatgaaattggtgttctacattac
ctacagaatgactttgataatgcagagtcattcttcaagcgatctctggagatgcgggag
aacgtccttgggccggaccatcttgatttatcccagtctctcaataatctagcagccttg
tacaacgatagaaagttacactctaaggctgaaccactttatgaaaggactttaaaaata
cgcatgaagaatctcaactcggatcatccaagtattgcatctgtgatcaaacatttagct
ctcctatacagaaaacagggtaaatatgagaaagctgagccattgtatgtacaggctgtg
gaaatacgggaaaagtcatttggaccaaatcatccttccgtcgcaactgcattagtcaac
ctggcagtgctgtactctcaacagaacaagcacaatgaagcagaaccattatataccagg
gctttgaaaatatatgaggatagtttaggtccccatcatcccagagtagcagagacacta
cgcaatctagctgtactgaaatatgatcagaaagattttgagacggcagcgaaaatgtac
aaacgtgctacggagattaaagaaaacgatggttcttatgctgggaaggacttgatatct
agacgcagttcaagtggagaaacaaactctacagttaaaaatcttttgcacccatga
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