Mercenaria mercenaria (northern quahog): 128554453
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Entry
128554453 CDS
T07835
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128554453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmer03021
]
128554453
03036 Chromosome and associated proteins [BR:
mmer03036
]
128554453
Transcription machinery [BR:
mmer03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128554453
Coactivators
SAGA/TFTC/STAGA complex
128554453
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
128554453
STAGA complex
128554453
TFTC complex
128554453
SAGA complex
128554453
SLIK complex
128554453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
DUF2848
Motif
Other DBs
NCBI-GeneID:
128554453
NCBI-ProteinID:
XP_053391709
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MAEKQEKGGKLNGHLTGESVRVVAESVGISGLPDTAAAYLAEDCTYRLKQIVQEALKFMH
HSKRSKLTCTDFDNALRAENVEPLYGFHTPDLVPFRYASGGGRELHFTEDKELDLQDVIN
ATLPKVPLDVSMKAHWLCIDGEQPAIPENPPPATKDQQKMEILDTSVKSSIDKSHKPAKS
VTPGGRLPHKPKGVSDLVKMKELSVHELSVEQQLYYKEITEACVGSDEGKRSEALQSLAT
DPGLHQMLPHFTSFISEGVKVNVVQNNLALLIYLMRMMKALMENQTIYLEKYLHEFVPGV
MSCIVSKQLCMRPDVDNHWALRDFAARLNAQICRNFHNNVNNIQARITKTFSKAVRSEKA
ALATIYGALSGLGELGAEVINAFVLPNLKMIGERVKMALEGPVMNSADRIAAENIKKIAA
KYIPPVLKTHRPSTDTVEDYLNEFGYLGPLLHAAVAKERSASTSSINIQQKPTIHLPQQG
KPHILIGTPGTVPGSAPQTPTSARIQQTSITIPRTPTTPNLTGNTAQKFVIMQQQRPGTP
VQSAGTSLVKMLPTTVQTGQQSGITPSSAGAQKVVVMSLPQTVSTPQLNQQIPGTSSDVG
MKSVFTTGDQTQTQVSILKTEPNT
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaacaagagaaagggggaaagctgaatgggcacctaacaggggagtctgta
cgagtggttgcagaatctgttgggatcagtggactgccagatactgctgctgcctacctc
gcagaggattgtacctacaggttgaaacagattgtccaggaagctttgaagttcatgcac
cacagtaagaggagtaaattgacatgtacagactttgacaatgctctcagagcagaaaat
gttgagcctttgtatgggtttcacacccctgacttggtaccgttccgttacgcgagtggc
ggaggtcgagaacttcacttcacagaggacaaagagttagatttacaagatgttattaat
gctacattacccaaagttcctctagatgtttcaatgaaagctcactggttgtgtattgat
ggagagcagccagccatcccagaaaaccctccgcccgccacaaaggaccaacaaaagatg
gagatcctggacacgtctgtgaagtcttcgatagataaaagccataaacccgccaagtct
gtgacccctggtggcagactaccacataaacccaagggggtgtcagacctcgtcaagatg
aaggaactgagtgtgcatgaactctctgttgagcaacagctgtactacaaggaaattaca
gaggcatgtgtcgggtcagatgaaggaaagaggtctgaggcattgcagagtttagcaaca
gatccaggccttcatcaaatgctgccgcattttacaagttttatatctgaaggggtgaag
gtgaatgttgtacagaacaatttagcattgttgatttacttgatgagaatgatgaaagcc
ttgatggaaaaccagaccatttaccttgagaaatatttacatgaatttgtacctggtgtc
atgtcatgtattgtaagtaaacaactgtgcatgagacctgatgtggataaccactgggca
ctgagagactttgctgctagacttaatgctcagatttgtagaaattttcataacaatgtg
aacaacatccaggcaagaattacaaagacattcagtaaagcagtacgttctgagaaggca
gctcttgctacaatatatggtgcattatctggccttggagaactaggagcagaggtgata
aatgcatttgtattgcccaacctgaagatgattggagaacgtgttaaaatggccctggaa
ggtccggtaatgaacagtgctgatagaatagcggcagaaaatattaagaaaattgctgca
aaatacatacctccagtactgaagacccacagaccctccacagatacagttgaagattac
cttaatgagtttggttatcttggaccattacttcatgctgcagttgctaaggaacggtca
gcttcaacatccagtattaacatacagcagaaaccaaccatacatttacctcagcaagga
aaaccccatattctcattggaactcctggtacggttccgggctctgcccctcaaacacca
acttcagccaggattcagcagaccagcattacaattcctcggacccctacaactcctaat
ttaactggaaacactgctcaaaaatttgttatcatgcagcaacagcgaccgggcacgcca
gttcagtctgctggaacttctcttgttaaaatgctacctacaactgtacaaactgggcag
caaagtgggataactccatcttctgctggagcacagaaggtggtagtgatgtcccttcca
cagactgtgtccacaccacaactcaatcagcaaataccaggaaccagtagtgatgttgga
atgaaatctgtcttcacaaccggggaccagacacagactcaagtctcgatattgaaaact
gaaccaaacacttga
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