Mercenaria mercenaria (northern quahog): 128555681
Help
Entry
128555681 CDS
T07835
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmer03036
]
128555681
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
128555681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
ARL2_Bind_BART
Motif
Other DBs
NCBI-GeneID:
128555681
NCBI-ProteinID:
XP_053394740
LinkDB
All DBs
Position
3:64635063..64716634
Genome browser
AA seq
2065 aa
AA seq
DB search
MNGEVPNVPITTLAGITSLTDLLPELPLPTPLPNAINNKSLLHNSKLSEKSRKLLEDADD
ALVEQISEILRQSTTDDIELKDNLEGAPVDGEMSELLRAILANDPEVFSGGSKERSRRSS
GRSSHSGNQSPYQSHSPRIGLPTGTGSSSVQKSPSLPHQQPGSSNYNGEHFDKRNKHKLP
TAVMSSPAQATVAESAMRQTTGRHSGVIDLDDDSDGGSIQMSRSNKKEYDRKKVAKCRGK
RNKATVMKKSEEKLRNEFLVEKMKASGKPVVCLEPLGSKMDSMFDLAKQKDDIWNTKCKP
VRVSLEPLDERDAKTKTLKSIATGGTVKTKGMKRHHGDHYDNDYGSDRGKRRRRSGRIEE
ESEESDHDSVEELMRRKKKEKRQRRMNQTDMSIEELLDSPTFKKFSSALEYIFDSAEDVN
FGSLDPNDEDVECPPESLISRTVLSELTSETAKLKSMGVLNQVPANTLVKLLTILQWNIR
DGTKLLPSLNQEHDDEDEEGQKLWREIAMERVGRSIDAALTAIYIMTSPKMPKQVFIEDV
IDRIVMFGKFQLQNTIYPEFDPVYRINPKDKDGYHSSSKMKRSRASQVKHKSSVSLYNKL
TDLVGNLAELVEIQELTDTIILQISTLGVAPFFVENVSELQLNAMKLVTTVFAHYDKHRQ
LVLEDIFSSLARLPSSKRNLRSYRLNAGEHIQMVTALALQLIQCVVKLPQPKSQEQPTEE
EQIEEAAKSKRDKHGRNKRKSDPLDPDVVIVTSYETAIRTGYNFLSVFLKKCTVKGEEDY
RSLFENFVHDLLSTVNKPEWPASELLLSLLGRILVQQFSNKSIEMSLRTSALEYLGIVAA
RLRKDAVSSQLGQEIIDDIVTKVNHESDKEDEDDVRRSTRSGRKSPEEEVIEPDETQSLQ
KAMLDYLSYHGASEPAYLFARQFYIAQWFRDTTKEAEKKNKKADEDFDAAQEEKSTENMT
DTEARTKFLLSQVEISYKPYSSYKPMPSKLDYDNGCLVARYLSSKRPFAQSFDIYLGQIL
KVLAENAVAIRTKAMKCLTSVVEADPGVLARPDMERGVHGRFLDPSTSVREAAIELVGKF
ILIRPELIPQYYNMLSERILDTGISVRKRVIKIFRDIFNEKPDFNKIPDMCVKMIRRVND
EDGIKKLVNEVFQTMWFTPLSSREKDSTKLIQRVVNITEVVAASKDTGFEFIEQLLDNLL
KKDEHGNYNKSALTSCRQIVDCLVENVLRLEETSVDGKCSNRLSACLSTLYLFSKIKPDL
MLEHAQTLQPYLNIKCSNQGDFYVLHYVARILELVIPLMDHPSENFLAQVEEDMIKLILN
HGMMVLESCVSCLGAVVNNVSHNYPLVKDCFQKFFGYLVKFQSYHQGHPTVPLQGNRKPT
LLRSLFTVGLMCKHFNFESKELGDDTETSLKEKIFDVLVYYTTHVDEDVQSKALTGLGFL
AVRHYEYMLGRTLKTMYSEHLTNPDTPIKLKCQVLKNLYYYLVEEEVRMAKSDADWKKHA
KEEDLKEMGDVQSGMASTIMQVYLKEVLEVFFSSKSQVRLEALNVIQLVLKQGLIHPVQC
VPYLISMATDSEAPIRVKAEQQLQEIEKKYPGFIHSKALQGIKMCFRLHRLIQGTESNNI
VVRGLHNPDDNSSSLNAFLYNILRTNRSHRRAILTSLLNLLDDSARINLPEQLYIADNLA
FFLYQTQDEPLYIIHQIDIIVSVSGSNLLQSFREKLQFKDNRSRKMKKKESSAPVRRSTR
SSKMLSNPHATENGVVNDKPNMYYDEDDDDKDILLNRLPGDIAPLKEIIWIAQGCILLLY
LKQHLKDMYGFTDGKIQNYSPTEAAKVYDKPLQRKSLVKFNPEQVIHVLRNKENDEEKSQ
KEQADQLVDDYLAFKDLMLSVDPPDEDDSDTEQRAAQPSATTTYTIKSRPEDGGGDAGTT
NHMENGDHSKNNADVIMVDGDNGDADHVNLDKESPSEPMKPKIPPMIISTSKINTPHREK
EKKKGSLVRTIRLPGASQLQASAHNFTSPVHSHSSHHSSHHSSSSSSRSHHHKTPSSTHK
KKKKKRKRYTSDSDDDNDSDYDPYG
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgaggtaccaaatgttcccatcaccaccttagcagggataacaagtctaaca
gacttgttacccgagctacccctaccaacaccattgccaaatgccataaataataaaagt
cttctccacaactcaaaactgtcagagaagtcaagaaaactattagaagatgcagatgat
gccttggttgaacagatctcggaaattctccgacaaagcaccactgatgacattgaactc
aaggacaaccttgaaggggctcctgttgatggtgaaatgtcggagctacttagagccata
ttagcaaatgatccagaagttttctccggaggatccaaggagcggtcaaggagaagttct
ggcagaagttctcatagtggaaaccagtcaccctaccagtcgcattctccaaggattggt
cttccaactgggactggttcatcaagtgtacaaaaatcaccatctcttccgcatcaacag
ccagggtcatcaaattacaatggtgaacacttcgataagcgaaacaaacacaagctacca
acagcagtcatgagttctcctgctcaagctacagttgcagaatctgccatgaggcaaaca
actggcaggcattctggagtgatcgatctagatgatgatagtgatggtggttctatacaa
atgtcgaggtcaaataagaaagaatatgatagaaagaaagtagctaagtgtaggggaaag
agaaataaagcaacagtaatgaagaaatctgaagagaagttaagaaatgaatttttggtt
gagaagatgaaagcctctggaaaacctgtagtctgtcttgaacctttaggctcaaagatg
gatagtatgtttgatctggctaaacagaaagatgatatctggaataccaagtgcaaacct
gtcagagtgtcccttgaaccattagatgaaagggatgcaaaaactaagacgttaaagtcc
atagctactggtggaacagtgaaaaccaaaggtatgaaaaggcatcatggggatcactat
gacaatgattatggctctgatcgaggaaagagaaggagacggtctggcagaattgaggag
gaaagtgaagagagtgaccatgattctgtcgaagaattgatgcgacgaaagaagaaagag
aaacgtcagaggcgcatgaatcaaacagacatgagtattgaagagcttctagacagtcca
acatttaaaaaattcagttctgccctggaatatatctttgacagtgctgaagatgtcaat
tttggcagcttagatccaaatgacgaagatgtagaatgccctccagaatcgttgatcagt
cggacagtgttgtctgaactaactagtgagacagccaagctgaagtcaatgggagtgtta
aaccaagttccagcaaatacacttgtaaaactgctgaccatattacagtggaatatcagg
gatggtactaaactgttgcccagtctaaaccaggaacatgatgatgaagatgaagagggt
cagaaactgtggcgagagattgccatggaacgtgttggcaggtccattgatgcagcactt
acagccatatatatcatgacatcaccaaaaatgccaaagcaagtgtttatagaagatgtt
atagatagaattgtcatgtttggaaagttccagttgcagaataccatttatccagaattt
gatcctgtatatagaataaaccccaaagataaagatggataccatagtagttcaaagatg
aagagatctcgggctagtcaagtgaaacacaagtcttctgtatcactatacaataaacta
accgacctggttggtaaccttgcagaacttgtagaaatccaggagcttactgacaccatt
atcttacagatttcaacattaggtgttgctcccttctttgtggaaaatgttagtgagttg
cagttaaatgcaatgaaacttgttacaactgtgtttgcccattatgacaagcacaggcaa
ttagtgttagaggatatcttctcaagtttagcaagactgccttccagcaaaagaaatctc
agaagttacagattaaatgcgggtgaacatatacagatggttacagctttagcattacag
ttgatacagtgtgtagtaaagttacctcagccaaaaagtcaggaacaaccaacagaagaa
gaacaaattgaagaagctgccaagtcaaaacgagacaaacatggaaggaacaaaagaaaa
tctgatcctttggacccagatgttgtgatagtgacttcttacgagactgccataagaacc
ggctacaacttcctgtctgtatttctgaaaaagtgtacagtaaaaggagaggaagactac
cggtctttgtttgaaaactttgtacatgatctcttatcaacagtgaacaaaccagagtgg
ccagcttcagaactacttctcagcttgttggggagaatactggtgcaacagttcagcaat
aaatccatagagatgtcattgagaacgtctgcactggagtatttaggtattgtagcagca
aggttgcggaaagatgcagtgtctagtcagttaggtcaagaaattattgacgatattgtt
accaaggtgaaccatgaaagtgataaagaggatgaggatgatgtccggagatcaacacga
agtggcaggaaatcacccgaggaggaagtaattgaaccagatgaaacccagagtttgcag
aaagctatgcttgactacctctcatatcatggtgccagtgagccggcctatttgtttgcc
cgccagttttacattgctcagtggttcagagacacaactaaagaagcagaaaagaaaaat
aagaaagcggatgaggattttgatgctgcacaagaggagaaatctacagaaaacatgacc
gatacagaagctagaacaaaatttttactttcacaagttgaaatcagctataaaccatac
tcatcatacaaaccaatgccaagcaagctggactatgataatggctgtcttgtagcgagg
tatctgtcatcaaaaagaccgtttgcccaaagttttgatatttatcttggccaaatcctt
aaggtgctagcagagaatgcagtagccataagaacaaaagcaatgaaatgcctcacatct
gttgttgaagctgatcctggagtgttagctagacctgatatggagagaggtgtacatggt
agatttcttgatccttccacgtctgtgagagaagcagcaatagaacttgtgggaaagttc
attcttatccgtccagaactcataccacagtactataacatgctctcagagagaatattg
gacacaggtatcagtgtgagaaaacgtgtgataaagatcttccgagacattttcaacgaa
aagccagactttaataaaattccagacatgtgtgtgaaaatgattcgcagagtgaatgat
gaagatggaattaaaaaactagtgaatgaagtgtttcagactatgtggtttactcctttg
agttctcgagaaaaagactcgacaaagcttattcaaagggttgttaatatcactgaggtt
gttgcggctagcaaagatacgggttttgaatttattgaacaattactggacaatttgtta
aagaaagacgagcatggaaactataacaagtcagcattaacgtcgtgtagacaaattgta
gactgtttagttgaaaatgtgttacggctagaggaaaccagtgttgatggcaaatgcagt
aaccgtttgtctgcctgtctgtccacactgtacctgtttagcaaaataaaaccagatttg
atgttagaacatgcacaaacactccaaccatatctcaatatcaaatgtagtaatcagggt
gatttctatgtgctacattatgttgcaaggatattggaacttgtgataccattgatggac
catccaagtgaaaacttccttgcacaggtggaagaggacatgatcaaattgatattgaat
catggaatgatggtgctagaaagctgtgttagctgtttaggtgctgttgtaaataatgtc
agtcataattatcctcttgttaaagattgcttccaaaaattcttcggttatctggtgaag
ttccagtcatatcaccaaggccaccctacagtcccgcttcaaggcaacagaaagccaacc
cttctcaggtcactgttcacagttggtctcatgtgtaaacacttcaattttgaatccaaa
gagttgggagatgatacggaaacttccttaaaggagaaaatatttgatgtgctggtttac
tacacaacacatgtggatgaagatgtgcaatcaaaagctcttactggtctaggttttctt
gcagttcggcattatgaatatatgttgggtaggacactaaaaaccatgtacagtgaacat
ttaaccaatccagatactcctataaagctcaagtgtcaggtattaaaaaacctttactac
tacttggtagaagaggaagtgagaatggcaaagtcagatgctgactggaaaaaacatgca
aaggaagaggacctgaaggaaatgggagatgtgcaatcaggtatggccagtaccattatg
caagtgtacttgaaagaggtgttggaagtgtttttctctagcaagtcgcaggttcgactt
gaagctttaaatgtgatacagttggttctcaagcagggcctcattcatccagtacagtgt
gtaccatatctcatcagcatggcaaccgactcagaagctcctatcagagtgaaggctgaa
cagcagttacaggaaattgagaaaaaatatccaggtttcattcatagtaaagccttgcaa
ggcattaaaatgtgcttccgtctacatcgccttatacaggggactgagagtaacaacatt
gtggtgagaggtctgcacaacccagacgataacagttcaagtcttaacgcattcctttac
aacattttacgtaccaataggtcacatcgtagagccattctcacctcattactcaatctt
cttgatgattctgcaagaatcaacctaccagaacaactgtatattgcagacaaccttgcc
ttctttttataccaaactcaggatgaacccctctacataatccaccagatagacattatt
gtgtcagtgtctggatccaatcttttacagtctttcagagagaagctgcagttcaaagac
aacagatcaagaaaaatgaaaaagaaagaaagtagtgcaccagttagacgatccacacgg
tctagcaagatgctgtcaaatccacatgcaacagaaaatggtgttgttaatgataagcct
aacatgtactatgatgaagatgatgatgacaaagacattttattaaatcgtttaccagga
gacattgcgcctttaaaagaaatcatctggatagctcaaggctgcattcttctcctctat
ctcaaacaacatctcaaagacatgtatggatttactgatggcaaaatccagaattactct
cccactgaagcagcaaaagtgtatgacaagcccctacaacgtaaatcactggtaaagttc
aatccagaacaagtgatccatgttttacgtaacaaggaaaacgatgaggagaaatcccag
aaggaacaggctgatcagctggttgatgattacctcgctttcaaagatctcatgttaagt
gttgacccaccagacgaagatgatagcgatactgaacaacgtgcagcacaaccctccgcg
acgaccacatatactataaaatctcggccggaggatggtgggggagatgcagggaccact
aaccacatggagaatggtgaccactcaaagaataacgcagatgttataatggttgatgga
gacaatggagacgctgatcatgtcaacttggataaagaatctccttctgaacctatgaaa
cccaaaattccacccatgattatatcaacttcaaaaataaacactccacatcgtgaaaaa
gagaaaaagaaaggatcattagttcggactatacgattacctggggcttcccaacttcag
gcctcggcacataactttacatcacctgtacatagtcattcatcacatcacagttcccat
cattcatcgtcatcatcatcaagatctcatcatcataagaccccgtcatccacacataaa
aagaagaagaaaaaacggaaacgttacacatcagattctgacgatgataacgatagtgat
tatgatccatatggttga
DBGET
integrated database retrieval system
